Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_A11
         (829 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    23   3.4  
DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex det...    23   4.6  
DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex det...    23   4.6  
DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex det...    23   4.6  
DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex det...    23   4.6  
DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex det...    23   4.6  
DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex det...    23   4.6  
DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex det...    23   4.6  
DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex det...    22   6.0  

>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
 Frame = +2

Query: 149 KINKFARLNAKVDDYKDELKVKQNDVKNLEEAVEELSLADDS-EKIPYLIGEIFICQNLE 325
           +++K   L  ++     +L   Q D+ N  + ++ +   + +   I  LI    I  N++
Sbjct: 40  QVDKMKTLVEELKSKPGKLVPLQCDLSNQNDILKVIEWVEKNLGAIDILINNATI--NID 97

Query: 326 ITLKNLEEAKAKKIHXIHDLEEKC 397
           +TL+N E    KKI  I+ L   C
Sbjct: 98  VTLQNDEVLDWKKIFDINLLGLTC 121


>DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -3

Query: 770 IT*VKNQYTYSTNLDNNNNIFCSIFKDHFFELN 672
           I+ + N Y YS   + NNN   + +K  ++ +N
Sbjct: 82  ISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNIN 114


>DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -3

Query: 770 IT*VKNQYTYSTNLDNNNNIFCSIFKDHFFELN 672
           I+ + N Y YS   + NNN   + +K  ++ +N
Sbjct: 82  ISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNIN 114


>DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -3

Query: 770 IT*VKNQYTYSTNLDNNNNIFCSIFKDHFFELN 672
           I+ + N Y YS   + NNN   + +K  ++ +N
Sbjct: 82  ISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNIN 114


>DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -3

Query: 770 IT*VKNQYTYSTNLDNNNNIFCSIFKDHFFELN 672
           I+ + N Y YS   + NNN   + +K  ++ +N
Sbjct: 82  ISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNIN 114


>DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -3

Query: 770 IT*VKNQYTYSTNLDNNNNIFCSIFKDHFFELN 672
           I+ + N Y YS   + NNN   + +K  ++ +N
Sbjct: 82  ISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNIN 114


>DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -3

Query: 770 IT*VKNQYTYSTNLDNNNNIFCSIFKDHFFELN 672
           I+ + N Y YS   + NNN   + +K  ++ +N
Sbjct: 82  ISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNIN 114


>DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -3

Query: 770 IT*VKNQYTYSTNLDNNNNIFCSIFKDHFFELN 672
           I+ + N Y YS   + NNN   + +K  ++ +N
Sbjct: 82  ISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNIN 114


>DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = -3

Query: 761 VKNQYTYSTNLDNNNNIFCSIFKDHFFELN 672
           + N Y YS   + NNN   + +K  ++ +N
Sbjct: 85  LSNNYNYSNYNNYNNNNNYNNYKKLYYNIN 114


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,562
Number of Sequences: 438
Number of extensions: 3020
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26460186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)