Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_A08
         (707 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC084196-2|AAK39622.1|  355|Caenorhabditis elegans Hypothetical ...    29   3.3  
AC024809-10|AAF59547.1|  272|Caenorhabditis elegans Hypothetical...    29   4.3  
AF047663-5|AAC04446.2|  247|Caenorhabditis elegans Hypothetical ...    28   5.7  
Z81460-2|CAB03831.1|  439|Caenorhabditis elegans Hypothetical pr...    28   7.5  
Z54284-5|CAA91062.1|  444|Caenorhabditis elegans Hypothetical pr...    28   7.5  
Z93396-6|CAB07715.1|  109|Caenorhabditis elegans Hypothetical pr...    27   9.9  
Z81514-5|CAB04192.2|  611|Caenorhabditis elegans Hypothetical pr...    27   9.9  
Z81138-2|CAB03473.1| 2265|Caenorhabditis elegans Hypothetical pr...    27   9.9  
U55364-11|AAA97976.1|  196|Caenorhabditis elegans Hypothetical p...    27   9.9  
AF067215-1|AAC17011.1|  495|Caenorhabditis elegans Hypothetical ...    27   9.9  

>AC084196-2|AAK39622.1|  355|Caenorhabditis elegans Hypothetical
           protein Y55D5A.3 protein.
          Length = 355

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 17/59 (28%), Positives = 30/59 (50%)
 Frame = +3

Query: 180 LNESLTKWFGEDTTFTHWEYVGDTGKGDSYLSELIRIKIYGLNSNKESKHVQCVLKSIP 356
           LN    +WF  +T F +W+  GD    D  ++ + ++K  G  +  E   V+ VL ++P
Sbjct: 271 LNVDANQWFLVETNFDNWKKQGD----DRRITAIQKLKELGRRNFDEKSMVE-VLSTVP 324


>AC024809-10|AAF59547.1|  272|Caenorhabditis elegans Hypothetical
           protein Y53G8AR.1 protein.
          Length = 272

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 20/84 (23%), Positives = 40/84 (47%)
 Frame = +3

Query: 279 LIRIKIYGLNSNKESKHVQCVLKSIPKNVSRRLTFRSNEFFYNEISFYEKVLPELSKFRA 458
           LI +  YGL +  +  + +   ++ P   +   T  S E  Y E+   +  +P+L+K+R 
Sbjct: 10  LIVLAFYGL-AGAQDANPEVTTEAAPVEAT---TPTSQEQLYEEVK--KSFIPKLNKYRR 63

Query: 459 SKSANEPFDKCPKLLFSYVDGVHD 530
             +    +    +L++  V+G HD
Sbjct: 64  EVAKRLNWTNMNELVYGEVEGYHD 87


>AF047663-5|AAC04446.2|  247|Caenorhabditis elegans Hypothetical
           protein W09G12.8 protein.
          Length = 247

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +3

Query: 393 EFFYNEISFYEKVLPELSKFRASKSANEPFDKCPKLLFS-YVDGVHDVI 536
           E  Y E+   E   P L++F A + +N P    P+L  S YV+  +DV+
Sbjct: 119 ECHYPELKDVELEDPVLNRFGAFEGSNTPIKLSPQLSQSNYVEFTYDVV 167


>Z81460-2|CAB03831.1|  439|Caenorhabditis elegans Hypothetical
           protein C04A11.2 protein.
          Length = 439

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = +2

Query: 269 PQRVDSHQNLRPEFEQRVEARPVRIKEHPKKR 364
           P R+   +N RPEF +RVEAR   I+   +KR
Sbjct: 315 PPRIHLERN-RPEFIERVEARQSIIRAASEKR 345


>Z54284-5|CAA91062.1|  444|Caenorhabditis elegans Hypothetical
           protein D2085.6 protein.
          Length = 444

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -1

Query: 269 VGITLAGVADILPMGEGCVLAEPFGERFVQSLV-GDERRHAG 147
           V   + GV ++LP+GE   L EP  +  V +L+   +RR  G
Sbjct: 306 VSTRVGGVPEVLPIGEFISLEEPVPDDLVDALLKAVDRREKG 347


>Z93396-6|CAB07715.1|  109|Caenorhabditis elegans Hypothetical
           protein ZC15.8 protein.
          Length = 109

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 15/62 (24%), Positives = 25/62 (40%)
 Frame = +1

Query: 391 MSSSITRSVSTRKSYLNYQSSEPQKAPMNRSTNARNCYSHTSTGSMTSFVWKTNRYMITA 570
           M S +  S+     +  YQ  + Q+ P N    + N Y  T   +      +TN++  T 
Sbjct: 1   MQSFLIASLLVASVFAQYQQQQYQQQPYNNQQYSNNQYQTTRGYNQQQQYGQTNQFGQTT 60

Query: 571 VP 576
            P
Sbjct: 61  TP 62


>Z81514-5|CAB04192.2|  611|Caenorhabditis elegans Hypothetical
           protein F26F2.6 protein.
          Length = 611

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
 Frame = +3

Query: 150 GVSPLITNERLNESLTKWFGEDTTFTHWEYVGDTGKGDSYLSELIRIKI------YGLNS 311
           G+  + TN+ LN  L   + ED   T   +VG   K D++   L ++KI      + LN+
Sbjct: 337 GLMTVATNDTLNYFLKGDYLEDIKMTPRFHVGIIKKDDTWTWRLPQLKIDQSPIPWSLNT 396

Query: 312 NKESKHVQCVLKSIPKN 362
            K +   +C    +P +
Sbjct: 397 RKVADTEKCGYVQLPSD 413


>Z81138-2|CAB03473.1| 2265|Caenorhabditis elegans Hypothetical
           protein W05B2.4 protein.
          Length = 2265

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +3

Query: 123 MADDFKTLTGVSPLITNERL 182
           + DD+K L GVSP +T E L
Sbjct: 360 LIDDYKVLWGVSPKLTEEEL 379


>U55364-11|AAA97976.1|  196|Caenorhabditis elegans Hypothetical
           protein F21C10.4 protein.
          Length = 196

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 18/54 (33%), Positives = 23/54 (42%)
 Frame = +1

Query: 379 RSAAMSSSITRSVSTRKSYLNYQSSEPQKAPMNRSTNARNCYSHTSTGSMTSFV 540
           RS         S S+R SYLNY SS  +      +T+  N Y  T T   T  +
Sbjct: 47  RSGGAGGGKFHSSSSRSSYLNYDSSAFRSNVFKPTTS--NSYFATGTSGSTHVI 98


>AF067215-1|AAC17011.1|  495|Caenorhabditis elegans Hypothetical
           protein ZK380.2 protein.
          Length = 495

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 31/133 (23%), Positives = 54/133 (40%)
 Frame = +3

Query: 306 NSNKESKHVQCVLKSIPKNVSRRLTFRSNEFFYNEISFYEKVLPELSKFRASKSANEPFD 485
           NS ++ K ++  LKS   N   R    S+  FYN      K+      F  +   +E  +
Sbjct: 334 NSWEKDKKIEN-LKSQLHNAQARNAAISDREFYNSQEKDRKIEKLKHSFCINHQFSEHIE 392

Query: 486 KCPKLLFSYVDGVHDVICLEDESIYDYGGAVRQEGIDYDHAKLSFKVLARFHAISFAMKD 665
           K      SYV+ ++D+  +  E+ Y+       + +D     L     ARF  I F    
Sbjct: 393 KLKLEHKSYVESLNDLKYMFSEAQYEL-----LDSLDVKPRALCDYYRARFDLIHFYSSK 447

Query: 666 QKPDEFXRIRKEL 704
           +K  +   + +E+
Sbjct: 448 EKERQRKELEQEM 460


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,694,611
Number of Sequences: 27780
Number of extensions: 312219
Number of successful extensions: 1055
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1055
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)