Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_A07
         (810 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0036 + 436592-437572                                             40   0.002
01_01_0902 - 7099260-7099778,7100291-7100704,7101579-7102010           40   0.003
04_01_0033 + 391565-391974,393484-393520,394959-395483                 38   0.007
04_01_0035 - 433848-434372,434905-435381                               38   0.012
04_01_0037 + 444239-444667,444817-444825                               33   0.20 
04_01_0038 + 446314-446787,446829-447350                               31   1.4  
03_02_0602 + 9759055-9759223,9759305-9759455,9759548-9759593,975...    29   5.8  
04_04_1197 + 31672019-31672325,31672431-31672740,31673334-316783...    28   7.6  

>04_01_0036 + 436592-437572
          Length = 326

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 18/36 (50%), Positives = 25/36 (69%)
 Frame = +2

Query: 701 IDTELLXAAGPSLKVVATISVGHDHIDVAECXKRGV 808
           +  ELL A  PSL+ + T+S G +HID+ EC +RGV
Sbjct: 63  VGAELLDAV-PSLRCIITVSAGTNHIDLRECARRGV 97


>01_01_0902 - 7099260-7099778,7100291-7100704,7101579-7102010
          Length = 454

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
 Frame = +2

Query: 581 QLLKDQCDV-NLWNQPSPVPRAELLKEVAGVNGIYCXLTDKIDTELLXAAGPSLKVVATI 757
           Q L  +C +  LW  P+      L    + +  +       +D  ++ A  PSL++V++ 
Sbjct: 18  QELDRRCRLFRLWESPADRRDDYLRAHASSIRAVVPYALQGVDAAMIDAL-PSLEIVSSF 76

Query: 758 SVGHDHIDVAECXKRGV 808
           SVG D +D+  C +RGV
Sbjct: 77  SVGIDRVDLDACLRRGV 93


>04_01_0033 + 391565-391974,393484-393520,394959-395483
          Length = 323

 Score = 38.3 bits (85), Expect = 0.007
 Identities = 17/31 (54%), Positives = 22/31 (70%)
 Frame = +2

Query: 716 LXAAGPSLKVVATISVGHDHIDVAECXKRGV 808
           L  A PSL+ V + + G DHID+AEC +RGV
Sbjct: 74  LFDAVPSLRCVVSTAAGVDHIDLAECARRGV 104


>04_01_0035 - 433848-434372,434905-435381
          Length = 333

 Score = 37.5 bits (83), Expect = 0.012
 Identities = 17/28 (60%), Positives = 19/28 (67%)
 Frame = +2

Query: 725 AGPSLKVVATISVGHDHIDVAECXKRGV 808
           A PSL  V T   G DHID+AEC +RGV
Sbjct: 81  AVPSLGCVVTTGAGVDHIDLAECARRGV 108


>04_01_0037 + 444239-444667,444817-444825
          Length = 145

 Score = 33.5 bits (73), Expect = 0.20
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +2

Query: 716 LXAAGPSLKVVATISVGHDHIDVAECXKRGV 808
           L A  P L++V   S G DHID+  C +RG+
Sbjct: 62  LVARLPKLEIVVATSTGVDHIDLDACRRRGI 92


>04_01_0038 + 446314-446787,446829-447350
          Length = 331

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +2

Query: 731 PSLKVVATISVGHDHIDVAECXKRGV 808
           P+L++V   S G DHI++  C +RG+
Sbjct: 70  PALELVVASSAGVDHINLGACRRRGI 95


>03_02_0602 +
           9759055-9759223,9759305-9759455,9759548-9759593,
           9759974-9760033,9760519-9760555,9761268-9761347,
           9761413-9761516,9761613-9761673,9762962-9763019,
           9763866-9763918,9764357-9765320,9766131-9766185,
           9767223-9768786
          Length = 1133

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = -2

Query: 332 SSALKNDGLAK*IEA*STTTVPSKTLPLVDLMKDRALIL 216
           ++A   +GLAK ++      +  K +P+VDL KDR  I+
Sbjct: 62  AAAAPVEGLAKSLQGVEVFDLSGKAVPVVDLWKDRKAIV 100


>04_04_1197 + 31672019-31672325,31672431-31672740,31673334-31678335,
            31678677-31678715
          Length = 1885

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +1

Query: 412  DPEVGHPERHEIHVL*KYFNDHLRSVSWWYCY 507
            DP +G+P+R E+  L       L+ VS  YCY
Sbjct: 1290 DPSLGYPDRDELLRLPLNLISSLKKVSITYCY 1321


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,927,262
Number of Sequences: 37544
Number of extensions: 377914
Number of successful extensions: 592
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 592
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2209429392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)