Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_A03
         (880 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    25   0.59 
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    24   1.8  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    23   4.2  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    22   7.3  

>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 25.4 bits (53), Expect = 0.59
 Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
 Frame = +2

Query: 146 ISLRSVIN*-IIRFQVYSKFSYIYYILN*FEVIKPIYR--HKIL 268
           I L+SV+   II  ++YS+F Y + I    + IK  YR  H++L
Sbjct: 121 ILLKSVLEIVIIDIEIYSQFLYGFMIYLILDTIKSKYRQMHRLL 164


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 461 SPRRNVTSIRLCHNNRLIVAAADYSPN 541
           SPR    + R C +NRL+V A   SP+
Sbjct: 241 SPRARPLA-RTCRDNRLLVLAGTSSPS 266


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +1

Query: 415 DLHNDLDLESIRK 453
           D + DLDL+SIRK
Sbjct: 222 DYYGDLDLKSIRK 234


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +1

Query: 673 GQYLERHSASMLLGMCWNCSKERNSXSCXCTQLLMLHK 786
           G  L+RH    L   C  CS+ + + S    + L+ HK
Sbjct: 60  GAELKRHLPDALHTECSKCSETQKNGSKKIMRHLIDHK 97


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,174
Number of Sequences: 336
Number of extensions: 3503
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24306755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)