Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_A03
         (880 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   5.3  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   5.3  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    24   7.0  
AY341161-1|AAR13725.1|  159|Anopheles gambiae CED6 protein.            23   9.3  
AY341160-1|AAR13724.1|  159|Anopheles gambiae CED6 protein.            23   9.3  
AY341159-1|AAR13723.1|  159|Anopheles gambiae CED6 protein.            23   9.3  
AY341158-1|AAR13722.1|  159|Anopheles gambiae CED6 protein.            23   9.3  
AY341157-1|AAR13721.1|  159|Anopheles gambiae CED6 protein.            23   9.3  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -1

Query: 730  SNSNTFLITSTLNDAPNIDLNRYSRSFALT*K 635
            +NSNT  + S  ND  N+ + R   SF +T K
Sbjct: 1180 TNSNTLAVISRTNDGKNVFV-RSMDSFGITRK 1210


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -1

Query: 730  SNSNTFLITSTLNDAPNIDLNRYSRSFALT*K 635
            +NSNT  + S  ND  N+ + R   SF +T K
Sbjct: 1181 TNSNTLAVISRTNDGKNVFV-RSMDSFGITRK 1211


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +1

Query: 592 EFIKFNKVKLEKGLPFMLKQTTASIY*GQY 681
           E IK  K+KL+  LP +L+     I  G Y
Sbjct: 570 EMIKAKKIKLDHELPTLLETELGWIVSGAY 599


>AY341161-1|AAR13725.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -1

Query: 745 CFVLLSNSNTFLITSTLNDAPNIDLNRY 662
           CFV +SN     IT T+  A ++   RY
Sbjct: 125 CFVFISNKLASDITLTIGQAFDLAYRRY 152


>AY341160-1|AAR13724.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -1

Query: 745 CFVLLSNSNTFLITSTLNDAPNIDLNRY 662
           CFV +SN     IT T+  A ++   RY
Sbjct: 125 CFVFISNKLASDITLTIGQAFDLAYRRY 152


>AY341159-1|AAR13723.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -1

Query: 745 CFVLLSNSNTFLITSTLNDAPNIDLNRY 662
           CFV +SN     IT T+  A ++   RY
Sbjct: 125 CFVFISNKLASDITLTIGQAFDLAYRRY 152


>AY341158-1|AAR13722.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -1

Query: 745 CFVLLSNSNTFLITSTLNDAPNIDLNRY 662
           CFV +SN     IT T+  A ++   RY
Sbjct: 125 CFVFISNKLASDITLTIGQAFDLAYRRY 152


>AY341157-1|AAR13721.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -1

Query: 745 CFVLLSNSNTFLITSTLNDAPNIDLNRY 662
           CFV +SN     IT T+  A ++   RY
Sbjct: 125 CFVFISNKLASDITLTIGQAFDLAYRRY 152


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 830,464
Number of Sequences: 2352
Number of extensions: 14444
Number of successful extensions: 92
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 92
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94266828
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)