Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_A03
         (880 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF237761-2|AAF81411.1|  908|Drosophila melanogaster unknown prot...    31   2.1  
AY060438-1|AAL25477.1|  906|Drosophila melanogaster LD46618p pro...    31   2.8  

>AF237761-2|AAF81411.1|  908|Drosophila melanogaster unknown
           protein.
          Length = 908

 Score = 31.1 bits (67), Expect = 2.1
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +1

Query: 352 SLYDRIKKLLAVGAPSFVRNVDLHNDLDLESIRKYTKPASERYFDK 489
           ++ +++ +L+  G   FVRN  LH DL L ++       S RY D+
Sbjct: 823 AIQNKVARLIT-GCEWFVRNTTLHRDLKLATVFDEINKHSSRYHDR 867


>AY060438-1|AAL25477.1|  906|Drosophila melanogaster LD46618p protein.
          Length = 906

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 15/66 (22%), Positives = 32/66 (48%)
 Frame = +1

Query: 292  WIIKFKMGYLKNENSCNNRASLYDRIKKLLAVGAPSFVRNVDLHNDLDLESIRKYTKPAS 471
            W+   ++  +  +++ N    L +R  + +    P +VR   LH DL+L ++ +     +
Sbjct: 809  WLYGIQIWGIAAKSNYNRIQVLQNRAMRAIT-DCPYYVRGTTLHRDLNLHTVEEQISRHT 867

Query: 472  ERYFDK 489
             RY D+
Sbjct: 868  SRYSDR 873


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,354,899
Number of Sequences: 53049
Number of extensions: 638113
Number of successful extensions: 1512
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1512
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4270708416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)