Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_A03
         (880 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   3.7  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    23   3.7  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   8.6  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   8.6  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   8.6  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -1

Query: 730 SNSNTFLITSTLNDAPN 680
           SNSN F++ +T+N+  N
Sbjct: 461 SNSNQFILMTTVNEGNN 477


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +1

Query: 394 PSFVRNVDLHNDLDLES 444
           P F RN+D +N+ DL++
Sbjct: 365 PKFPRNIDEYNNNDLDT 381


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 10/26 (38%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = +1

Query: 358 YDRIKKLLAVGAPSFVRNVD-LHNDL 432
           YD+I ++L      F++N+D LH+ L
Sbjct: 83  YDKILQVLGATPRDFLQNLDALHDHL 108


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 526  SGGNNKAIIMTQPYRSN 476
            S GN +  I TQP R+N
Sbjct: 1287 SPGNQQQTIQTQPSRNN 1303


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 10/26 (38%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = +1

Query: 358 YDRIKKLLAVGAPSFVRNVD-LHNDL 432
           YD+I ++L      F++N+D LH+ L
Sbjct: 83  YDKILQVLGATPRDFLQNLDALHDHL 108


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,371
Number of Sequences: 438
Number of extensions: 4503
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)