Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_P22
         (562 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   1.8  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   3.1  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   9.6  

>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 10/44 (22%), Positives = 21/44 (47%)
 Frame = -2

Query: 507 DVVSKIYIATDSSPVDMQSYELCCDMIDVVIDISCIYGMVDETE 376
           D+  + +   D+ P D Q   +C   +D+ ++      +VDE +
Sbjct: 546 DIDPQQFCNGDNRPADCQQNCMCTHKVDIPLNAIVEIVLVDEVQ 589


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -2

Query: 423 VVIDISCIYGMVDETETN 370
           +V D+  +YG + +T+TN
Sbjct: 303 IVFDLLQVYGHIPKTQTN 320


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -3

Query: 329 MVLYYIYERSTNSW 288
           ++LYYIY +  + W
Sbjct: 11  LLLYYIYSKHYSYW 24


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,071
Number of Sequences: 336
Number of extensions: 2822
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)