Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_P22
(562 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC003088-1|AAH03088.1| 249|Homo sapiens RRAGD protein protein. 207 2e-53
AL138717-3|CAB99362.1| 400|Homo sapiens protein ( onical ubiqui... 207 2e-53
AL138717-2|CAB99361.1| 249|Homo sapiens protein ( Human DNA seq... 207 2e-53
AF272036-1|AAG32663.1| 400|Homo sapiens Rag D protein. 207 2e-53
BC016668-1|AAH16668.1| 399|Homo sapiens Ras-related GTP binding... 205 7e-53
AL139260-1|CAI23049.1| 399|Homo sapiens Ras-related GTP binding... 205 7e-53
AF323609-1|AAG45221.1| 399|Homo sapiens GTPase-interacting prot... 205 7e-53
AF272035-1|AAG32662.1| 399|Homo sapiens Rag C protein. 205 7e-53
AK023373-1|BAB14548.1| 121|Homo sapiens protein ( Homo sapiens ... 141 2e-33
BC029041-1|AAH29041.1| 668|Homo sapiens ZBTB20 protein protein. 31 2.1
U82469-1|AAB53701.1| 520|Homo sapiens tubby related protein 2 T... 31 2.8
AF139460-1|AAG28340.2| 741|Homo sapiens BTB/POZ zinc finger pro... 31 2.8
BC026070-1|AAH26070.1| 520|Homo sapiens tubby like protein 2 pr... 29 8.5
>BC003088-1|AAH03088.1| 249|Homo sapiens RRAGD protein protein.
Length = 249
Score = 207 bits (506), Expect = 2e-53
Identities = 100/149 (67%), Positives = 120/149 (80%), Gaps = 1/149 (0%)
Frame = -2
Query: 561 NLLNILISNSGIEKAFLFDVVSKIYIATDSSPVDMQSYELCCDMIDVVIDISCIYGMVDE 382
NLLNI ISNSGIEKAFLFDVVSKIYIATDS+PVDMQ+YELCCDMIDVVIDISCIYG+ ++
Sbjct: 95 NLLNIFISNSGIEKAFLFDVVSKIYIATDSTPVDMQTYELCCDMIDVVIDISCIYGLKED 154
Query: 381 TETNTFNNESSSLIKLNNGTVLYLREVNKFLALVCILREENFQKQGVIDYNFLCFRHAIT 202
++ ES+++IKLNN TVLYL+EV KFLALVC +REE+F+++G+IDYNF CFR AI
Sbjct: 155 GAGTPYDKESTAIIKLNNTTVLYLKEVTKFLALVCFVREESFERKGLIDYNFHCFRKAIH 214
Query: 201 QVFELRNK-CQSSGTDRRRSGTPDAVPNG 118
+VFE+R K +S R A PNG
Sbjct: 215 EVFEVRMKVVKSRKVQNRLQKKKRATPNG 243
>AL138717-3|CAB99362.1| 400|Homo sapiens protein ( onical ubiquitin
conjugating ).).
Length = 400
Score = 207 bits (506), Expect = 2e-53
Identities = 100/149 (67%), Positives = 120/149 (80%), Gaps = 1/149 (0%)
Frame = -2
Query: 561 NLLNILISNSGIEKAFLFDVVSKIYIATDSSPVDMQSYELCCDMIDVVIDISCIYGMVDE 382
NLLNI ISNSGIEKAFLFDVVSKIYIATDS+PVDMQ+YELCCDMIDVVIDISCIYG+ ++
Sbjct: 246 NLLNIFISNSGIEKAFLFDVVSKIYIATDSTPVDMQTYELCCDMIDVVIDISCIYGLKED 305
Query: 381 TETNTFNNESSSLIKLNNGTVLYLREVNKFLALVCILREENFQKQGVIDYNFLCFRHAIT 202
++ ES+++IKLNN TVLYL+EV KFLALVC +REE+F+++G+IDYNF CFR AI
Sbjct: 306 GAGTPYDKESTAIIKLNNTTVLYLKEVTKFLALVCFVREESFERKGLIDYNFHCFRKAIH 365
Query: 201 QVFELRNK-CQSSGTDRRRSGTPDAVPNG 118
+VFE+R K +S R A PNG
Sbjct: 366 EVFEVRMKVVKSRKVQNRLQKKKRATPNG 394
>AL138717-2|CAB99361.1| 249|Homo sapiens protein ( Human DNA
sequence from clone RP11-11D8 on chromosome 6 Contains
the5' end of the NCUBE1 gene for non-canonical ubiquitin
conjugating ).
Length = 249
Score = 207 bits (506), Expect = 2e-53
Identities = 100/149 (67%), Positives = 120/149 (80%), Gaps = 1/149 (0%)
Frame = -2
Query: 561 NLLNILISNSGIEKAFLFDVVSKIYIATDSSPVDMQSYELCCDMIDVVIDISCIYGMVDE 382
NLLNI ISNSGIEKAFLFDVVSKIYIATDS+PVDMQ+YELCCDMIDVVIDISCIYG+ ++
Sbjct: 95 NLLNIFISNSGIEKAFLFDVVSKIYIATDSTPVDMQTYELCCDMIDVVIDISCIYGLKED 154
Query: 381 TETNTFNNESSSLIKLNNGTVLYLREVNKFLALVCILREENFQKQGVIDYNFLCFRHAIT 202
++ ES+++IKLNN TVLYL+EV KFLALVC +REE+F+++G+IDYNF CFR AI
Sbjct: 155 GAGTPYDKESTAIIKLNNTTVLYLKEVTKFLALVCFVREESFERKGLIDYNFHCFRKAIH 214
Query: 201 QVFELRNK-CQSSGTDRRRSGTPDAVPNG 118
+VFE+R K +S R A PNG
Sbjct: 215 EVFEVRMKVVKSRKVQNRLQKKKRATPNG 243
>AF272036-1|AAG32663.1| 400|Homo sapiens Rag D protein.
Length = 400
Score = 207 bits (506), Expect = 2e-53
Identities = 100/149 (67%), Positives = 120/149 (80%), Gaps = 1/149 (0%)
Frame = -2
Query: 561 NLLNILISNSGIEKAFLFDVVSKIYIATDSSPVDMQSYELCCDMIDVVIDISCIYGMVDE 382
NLLNI ISNSGIEKAFLFDVVSKIYIATDS+PVDMQ+YELCCDMIDVVIDISCIYG+ ++
Sbjct: 246 NLLNIFISNSGIEKAFLFDVVSKIYIATDSTPVDMQTYELCCDMIDVVIDISCIYGLKED 305
Query: 381 TETNTFNNESSSLIKLNNGTVLYLREVNKFLALVCILREENFQKQGVIDYNFLCFRHAIT 202
++ ES+++IKLNN TVLYL+EV KFLALVC +REE+F+++G+IDYNF CFR AI
Sbjct: 306 GAGTPYDKESTAIIKLNNTTVLYLKEVTKFLALVCFVREESFERKGLIDYNFHCFRKAIH 365
Query: 201 QVFELRNK-CQSSGTDRRRSGTPDAVPNG 118
+VFE+R K +S R A PNG
Sbjct: 366 EVFEVRMKVVKSRKVQNRLQKKKRATPNG 394
>BC016668-1|AAH16668.1| 399|Homo sapiens Ras-related GTP binding C
protein.
Length = 399
Score = 205 bits (501), Expect = 7e-53
Identities = 95/125 (76%), Positives = 112/125 (89%)
Frame = -2
Query: 561 NLLNILISNSGIEKAFLFDVVSKIYIATDSSPVDMQSYELCCDMIDVVIDISCIYGMVDE 382
NLLNI ISNSGIEKAFLFDVVSKIYIATDSSPVDMQSYELCCDMIDVVID+SCIYG+ ++
Sbjct: 245 NLLNIFISNSGIEKAFLFDVVSKIYIATDSSPVDMQSYELCCDMIDVVIDVSCIYGLKED 304
Query: 381 TETNTFNNESSSLIKLNNGTVLYLREVNKFLALVCILREENFQKQGVIDYNFLCFRHAIT 202
+ ++ ES ++IKLNN TVLYL+EV KFLALVCILREE+F+++G+IDYNF CFR AI
Sbjct: 305 GSGSAYDKESMAIIKLNNTTVLYLKEVTKFLALVCILREESFERKGLIDYNFHCFRKAIH 364
Query: 201 QVFEL 187
+VFE+
Sbjct: 365 EVFEV 369
>AL139260-1|CAI23049.1| 399|Homo sapiens Ras-related GTP binding C
protein.
Length = 399
Score = 205 bits (501), Expect = 7e-53
Identities = 95/125 (76%), Positives = 112/125 (89%)
Frame = -2
Query: 561 NLLNILISNSGIEKAFLFDVVSKIYIATDSSPVDMQSYELCCDMIDVVIDISCIYGMVDE 382
NLLNI ISNSGIEKAFLFDVVSKIYIATDSSPVDMQSYELCCDMIDVVID+SCIYG+ ++
Sbjct: 245 NLLNIFISNSGIEKAFLFDVVSKIYIATDSSPVDMQSYELCCDMIDVVIDVSCIYGLKED 304
Query: 381 TETNTFNNESSSLIKLNNGTVLYLREVNKFLALVCILREENFQKQGVIDYNFLCFRHAIT 202
+ ++ ES ++IKLNN TVLYL+EV KFLALVCILREE+F+++G+IDYNF CFR AI
Sbjct: 305 GSGSAYDKESMAIIKLNNTTVLYLKEVTKFLALVCILREESFERKGLIDYNFHCFRKAIH 364
Query: 201 QVFEL 187
+VFE+
Sbjct: 365 EVFEV 369
>AF323609-1|AAG45221.1| 399|Homo sapiens GTPase-interacting protein
2 protein.
Length = 399
Score = 205 bits (501), Expect = 7e-53
Identities = 95/125 (76%), Positives = 112/125 (89%)
Frame = -2
Query: 561 NLLNILISNSGIEKAFLFDVVSKIYIATDSSPVDMQSYELCCDMIDVVIDISCIYGMVDE 382
NLLNI ISNSGIEKAFLFDVVSKIYIATDSSPVDMQSYELCCDMIDVVID+SCIYG+ ++
Sbjct: 245 NLLNIFISNSGIEKAFLFDVVSKIYIATDSSPVDMQSYELCCDMIDVVIDVSCIYGLKED 304
Query: 381 TETNTFNNESSSLIKLNNGTVLYLREVNKFLALVCILREENFQKQGVIDYNFLCFRHAIT 202
+ ++ ES ++IKLNN TVLYL+EV KFLALVCILREE+F+++G+IDYNF CFR AI
Sbjct: 305 GSGSAYDKESMAIIKLNNTTVLYLKEVTKFLALVCILREESFERKGLIDYNFHCFRKAIH 364
Query: 201 QVFEL 187
+VFE+
Sbjct: 365 EVFEV 369
>AF272035-1|AAG32662.1| 399|Homo sapiens Rag C protein.
Length = 399
Score = 205 bits (501), Expect = 7e-53
Identities = 95/125 (76%), Positives = 112/125 (89%)
Frame = -2
Query: 561 NLLNILISNSGIEKAFLFDVVSKIYIATDSSPVDMQSYELCCDMIDVVIDISCIYGMVDE 382
NLLNI ISNSGIEKAFLFDVVSKIYIATDSSPVDMQSYELCCDMIDVVID+SCIYG+ ++
Sbjct: 245 NLLNIFISNSGIEKAFLFDVVSKIYIATDSSPVDMQSYELCCDMIDVVIDVSCIYGLKED 304
Query: 381 TETNTFNNESSSLIKLNNGTVLYLREVNKFLALVCILREENFQKQGVIDYNFLCFRHAIT 202
+ ++ ES ++IKLNN TVLYL+EV KFLALVCILREE+F+++G+IDYNF CFR AI
Sbjct: 305 GSGSAYDKESMAIIKLNNTTVLYLKEVTKFLALVCILREESFERKGLIDYNFHCFRKAIH 364
Query: 201 QVFEL 187
+VFE+
Sbjct: 365 EVFEV 369
>AK023373-1|BAB14548.1| 121|Homo sapiens protein ( Homo sapiens
cDNA FLJ13311 fis, clone OVARC1001476, highly similar to
Mus musculus YGR163w mRNA homologue. ).
Length = 121
Score = 141 bits (341), Expect = 2e-33
Identities = 62/91 (68%), Positives = 79/91 (86%)
Frame = -2
Query: 459 MQSYELCCDMIDVVIDISCIYGMVDETETNTFNNESSSLIKLNNGTVLYLREVNKFLALV 280
MQSYELCCDMIDVVID+SCIYG+ ++ + ++ ES ++IKLNN TVLYL+EV KFLALV
Sbjct: 1 MQSYELCCDMIDVVIDVSCIYGLKEDGSGSAYDKESMAIIKLNNTTVLYLKEVTKFLALV 60
Query: 279 CILREENFQKQGVIDYNFLCFRHAITQVFEL 187
CILREE+F+++G+IDYNF CFR AI +VFE+
Sbjct: 61 CILREESFERKGLIDYNFHCFRKAIHEVFEV 91
>BC029041-1|AAH29041.1| 668|Homo sapiens ZBTB20 protein protein.
Length = 668
Score = 31.5 bits (68), Expect = 2.1
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = -2
Query: 222 CFRHAITQVFELRNKCQSSGTDRRRSGTPDAVPNGAADSTESTSDHSQPQLAIXHLY 52
C R V ++ Q SG D R GTP++ +G + TES S PQ ++ +Y
Sbjct: 116 CTRIVSQNVGDVFPGIQDSGQDTPR-GTPESGTSGQSSDTESGYLQSHPQHSVDRIY 171
>U82469-1|AAB53701.1| 520|Homo sapiens tubby related protein 2
TULP2 protein.
Length = 520
Score = 31.1 bits (67), Expect = 2.8
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = -3
Query: 323 LYYIYERSTNSWHWFAFSGKKISKNKV*SITISYVSGMLLRKSLNFVINVK 171
LYY+Y +++S F +G+K ++K + IS +L R NFV V+
Sbjct: 304 LYYLYLETSDSLQRFLLAGRKRRRSKTSNYLISLDPTLLSRDGDNFVGKVR 354
>AF139460-1|AAG28340.2| 741|Homo sapiens BTB/POZ zinc finger
protein DPZF protein.
Length = 741
Score = 31.1 bits (67), Expect = 2.8
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = -2
Query: 222 CFRHAITQVFELRNKCQSSGTDRRRSGTPDAVPNGAADSTESTSDHSQPQLAIXHLY 52
C R V ++ Q SG D R GTP++ +G TES S PQ ++ +Y
Sbjct: 189 CTRIVSQNVGDVFPGIQDSGQDTPR-GTPESGTSGQGSDTESGYLQSHPQHSVDRIY 244
>BC026070-1|AAH26070.1| 520|Homo sapiens tubby like protein 2
protein.
Length = 520
Score = 29.5 bits (63), Expect = 8.5
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = -3
Query: 323 LYYIYERSTNSWHWFAFSGKKISKNKV*SITISYVSGMLLRKSLNFVINVK 171
LYY+Y +++S F +G+K ++K + IS L R NFV V+
Sbjct: 304 LYYLYLETSDSLQRFLLAGRKRRRSKTSNYLISLDPTHLSRDGDNFVGKVR 354
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,551,418
Number of Sequences: 237096
Number of extensions: 1441949
Number of successful extensions: 2779
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2779
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5646880600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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