BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_P18
(406 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF164153-1|AAD47077.1| 131|Anopheles gambiae ribosomal protein ... 193 2e-51
AY583530-1|AAS93544.1| 260|Anopheles gambiae NOS protein protein. 24 1.8
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p... 24 1.8
AY578810-1|AAT07315.1| 897|Anopheles gambiae smurf protein. 23 3.2
AY496421-1|AAS80138.1| 439|Anopheles gambiae bacteria responsiv... 22 9.8
AJ618928-1|CAF02007.1| 285|Anopheles gambiae odorant-binding pr... 22 9.8
>AF164153-1|AAD47077.1| 131|Anopheles gambiae ribosomal protein S17
protein.
Length = 131
Score = 193 bits (471), Expect = 2e-51
Identities = 93/110 (84%), Positives = 100/110 (90%)
Frame = -1
Query: 331 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 152
IEKYYTRLT+DFDTNKRI EE+AIIPTKPLRNKIAGF THLM+RLRHSQVRGISIKLQEE
Sbjct: 17 IEKYYTRLTMDFDTNKRIVEEVAIIPTKPLRNKIAGFVTHLMKRLRHSQVRGISIKLQEE 76
Query: 151 ERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPATQG 2
ERERRDNYVP+VSALE DIIEVDP+TK+MLK LDFNNI +QLT P G
Sbjct: 77 ERERRDNYVPDVSALEQDIIEVDPETKEMLKHLDFNNI-VVQLTNPTAPG 125
>AY583530-1|AAS93544.1| 260|Anopheles gambiae NOS protein protein.
Length = 260
Score = 24.2 bits (50), Expect = 1.8
Identities = 13/47 (27%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = -1
Query: 178 GISIKLQEEERERRDNYVPEVSALE-HDIIEVDPDTKDMLKMLDFNN 41
G + +L+EEE + + + PE+ E + ++V + K+M+ + D +N
Sbjct: 87 GTTCELEEEEVDLQAKHAPEMDGSELMEAVDVAAELKNMV-LQDISN 132
>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
protein.
Length = 1077
Score = 24.2 bits (50), Expect = 1.8
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -2
Query: 201 VSDTRKCEESLSNFRKRSVRGVTTMSQKCLLSNMTS 94
+++TR C E++S F+ R T+ +K + + TS
Sbjct: 356 INETRVCGENISTFQLEERRRRRTVIEKLNIEDGTS 391
>AY578810-1|AAT07315.1| 897|Anopheles gambiae smurf protein.
Length = 897
Score = 23.4 bits (48), Expect = 3.2
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 100 DIIEVDPDTKDMLKMLDFNNINGL 29
DI +VDPD L + NNI G+
Sbjct: 636 DIEDVDPDLHRSLTWILENNITGI 659
>AY496421-1|AAS80138.1| 439|Anopheles gambiae bacteria responsive
protein 2 protein.
Length = 439
Score = 21.8 bits (44), Expect = 9.8
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -1
Query: 142 RRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNI 38
R D Y ++ L H V D ++ LDF NI
Sbjct: 208 RSDGYQLGITVLSHVNSSVFMDIPAIINYLDFVNI 242
>AJ618928-1|CAF02007.1| 285|Anopheles gambiae odorant-binding
protein OBPjj83a protein.
Length = 285
Score = 21.8 bits (44), Expect = 9.8
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Frame = -1
Query: 184 VRGISI--KLQEEERERRDNYVPEV 116
+R +SI KLQ ++RRD YV V
Sbjct: 168 IRSLSICAKLQRIPKDRRDLYVQGV 192
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 388,940
Number of Sequences: 2352
Number of extensions: 7348
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32494788
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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