Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_P17
(675 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 98 8e-23
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 63 2e-12
L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein pro... 57 1e-10
L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein pro... 48 6e-08
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 44 1e-06
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 38 1e-04
AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc fi... 34 0.001
AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 33 0.002
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 25 0.87
DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. 24 1.2
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 24 1.2
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.2
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 24 1.5
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 23 2.7
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 23 2.7
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 97.9 bits (233), Expect = 8e-23
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 6/221 (2%)
Frame = -2
Query: 671 ICGYKSVQXRSLSKHLQTHYLQ----FTCESCGKSYATNTSLQHHIKYSCSRVGNKP-MC 507
+C Q HL++H + + C CGK++A L H + + G KP C
Sbjct: 66 LCQKAFDQKNLYQSHLRSHGKEGEDPYRCNICGKTFAVPARLTRHYR---THTGEKPYQC 122
Query: 506 RTCRREFDNLEDKRHHYKDSSHCRLYVCQECGERFAYNREKAAHLEKVHDVPLKQHKCPE 327
C + F E+ H + + R Y C C F ++ + H+ ++H + HKC
Sbjct: 123 EYCSKSFSVKENLSVHRRIHTKERPYKCDVCERAFEHSGKLHRHM-RIHTGE-RPHKCTV 180
Query: 326 CDEVFKKASSLAMHFRMVHTKDFSS-CPSCDKKFPNEYKLNRHLPVHTGEKPFKCSVCSK 150
C + F ++ L +H R HT + C +C K F +L H HTGEKP+ C +C K
Sbjct: 181 CSKTFIQSGQLVIHMR-THTGEKPYVCKACGKGFTCSKQLKVHTRTHTGEKPYTCDICGK 239
Query: 149 CFPRKSTLNQHMWIHSEIKRXTCKXCXKPXKQKVCWNTQMK 27
F L H H K C C + K +K
Sbjct: 240 SFGYNHVLKLHQVAHYGEKVYKCTLCHETFGSKKTMELHIK 280
Score = 94.7 bits (225), Expect = 7e-22
Identities = 55/153 (35%), Positives = 78/153 (50%), Gaps = 5/153 (3%)
Frame = -2
Query: 509 CRTCRREFD--NLEDK--RHHYKDSSHCRLYVCQECGERFAYNREKAAHLEKVHDVPLKQ 342
C C++ FD NL R H K+ Y C CG+ FA H + H K
Sbjct: 64 CLLCQKAFDQKNLYQSHLRSHGKEGEDP--YRCNICGKTFAVPARLTRHY-RTHTGE-KP 119
Query: 341 HKCPECDEVFKKASSLAMHFRMVHTKDFS-SCPSCDKKFPNEYKLNRHLPVHTGEKPFKC 165
++C C + F +L++H R +HTK+ C C++ F + KL+RH+ +HTGE+P KC
Sbjct: 120 YQCEYCSKSFSVKENLSVH-RRIHTKERPYKCDVCERAFEHSGKLHRHMRIHTGERPHKC 178
Query: 164 SVCSKCFPRKSTLNQHMWIHSEIKRXTCKXCXK 66
+VCSK F + L HM H+ K CK C K
Sbjct: 179 TVCSKTFIQSGQLVIHMRTHTGEKPYVCKACGK 211
Score = 91.9 bits (218), Expect = 5e-21
Identities = 52/182 (28%), Positives = 79/182 (43%), Gaps = 2/182 (1%)
Frame = -2
Query: 605 FTCESCGKSYATNTSLQHHIKYSCSRVGNKPM-CRTCRREFDNLEDKRHHYKDSSHCRLY 429
+ C C K++ Q H++ S + G P C C + F HY+ + + Y
Sbjct: 62 YQCLLCQKAFDQKNLYQSHLR-SHGKEGEDPYRCNICGKTFAVPARLTRHYRTHTGEKPY 120
Query: 428 VCQECGERFAYNREKAAHLEKVHDVPLKQHKCPECDEVFKKASSLAMHFRMVHTKDFS-S 252
C+ C + F+ + H ++H + +KC C+ F+ + L H R +HT +
Sbjct: 121 QCEYCSKSFSVKENLSVH-RRIHTKE-RPYKCDVCERAFEHSGKLHRHMR-IHTGERPHK 177
Query: 251 CPSCDKKFPNEYKLNRHLPVHTGEKPFKCSVCSKCFPRKSTLNQHMWIHSEIKRXTCKXC 72
C C K F +L H+ HTGEKP+ C C K F L H H+ K TC C
Sbjct: 178 CTVCSKTFIQSGQLVIHMRTHTGEKPYVCKACGKGFTCSKQLKVHTRTHTGEKPYTCDIC 237
Query: 71 XK 66
K
Sbjct: 238 GK 239
Score = 88.2 bits (209), Expect = 6e-20
Identities = 54/194 (27%), Positives = 87/194 (44%), Gaps = 3/194 (1%)
Frame = -2
Query: 671 ICGYKSVQXRSLSKHLQTHYLQ--FTCESCGKSYATNTSLQHHIKYSCSRVGNKPMCRTC 498
ICG L++H +TH + + CE C KS++ +L H + K C C
Sbjct: 96 ICGKTFAVPARLTRHYRTHTGEKPYQCEYCSKSFSVKENLSVHRRIHTKERPYK--CDVC 153
Query: 497 RREFDNLEDKRHHYKDSSHCRLYVCQECGERFAYNREKAAHLEKVHDVPLKQHKCPECDE 318
R F++ H + + R + C C + F + + H+ + H K + C C +
Sbjct: 154 ERAFEHSGKLHRHMRIHTGERPHKCTVCSKTFIQSGQLVIHM-RTHTGE-KPYVCKACGK 211
Query: 317 VFKKASSLAMHFRMVHTKDFS-SCPSCDKKFPNEYKLNRHLPVHTGEKPFKCSVCSKCFP 141
F + L +H R HT + +C C K F + L H H GEK +KC++C + F
Sbjct: 212 GFTCSKQLKVHTR-THTGEKPYTCDICGKSFGYNHVLKLHQVAHYGEKVYKCTLCHETFG 270
Query: 140 RKSTLNQHMWIHSE 99
K T+ H+ HS+
Sbjct: 271 SKKTMELHIKTHSD 284
Score = 72.5 bits (170), Expect = 3e-15
Identities = 37/125 (29%), Positives = 56/125 (44%), Gaps = 1/125 (0%)
Frame = -2
Query: 437 RLYVCQECGERFAYNREKAAHLEKVHDVPLKQHKCPECDEVFKKASSLAMHFRMVHTKDF 258
+ Y C C + F +HL ++C C + F + L H+R HT +
Sbjct: 60 KTYQCLLCQKAFDQKNLYQSHLRSHGKEGEDPYRCNICGKTFAVPARLTRHYR-THTGEK 118
Query: 257 S-SCPSCDKKFPNEYKLNRHLPVHTGEKPFKCSVCSKCFPRKSTLNQHMWIHSEIKRXTC 81
C C K F + L+ H +HT E+P+KC VC + F L++HM IH+ + C
Sbjct: 119 PYQCEYCSKSFSVKENLSVHRRIHTKERPYKCDVCERAFEHSGKLHRHMRIHTGERPHKC 178
Query: 80 KXCXK 66
C K
Sbjct: 179 TVCSK 183
Score = 28.3 bits (60), Expect = 0.071
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = -2
Query: 182 EKPFKCSVCSKCFPRKSTLNQHMWIHSEIKR--XTCKXCXK 66
EK ++C +C K F +K+ H+ H + C C K
Sbjct: 59 EKTYQCLLCQKAFDQKNLYQSHLRSHGKEGEDPYRCNICGK 99
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 63.3 bits (147), Expect = 2e-12
Identities = 22/60 (36%), Positives = 37/60 (61%)
Frame = -2
Query: 251 CPSCDKKFPNEYKLNRHLPVHTGEKPFKCSVCSKCFPRKSTLNQHMWIHSEIKRXTCKXC 72
CP C K+F ++ L H+ +HTGEKP+ CS C + F + + L +H+ +H+ + C+ C
Sbjct: 12 CPECHKRFTRDHHLKTHMRLHTGEKPYHCSHCDRQFVQVANLRRHLRVHTGERPYACELC 71
Score = 60.5 bits (140), Expect = 1e-11
Identities = 25/65 (38%), Positives = 36/65 (55%)
Frame = -2
Query: 347 KQHKCPECDEVFKKASSLAMHFRMVHTKDFSSCPSCDKKFPNEYKLNRHLPVHTGEKPFK 168
K +CPEC + F + L H R+ + C CD++F L RHL VHTGE+P+
Sbjct: 8 KPFECPECHKRFTRDHHLKTHMRLHTGEKPYHCSHCDRQFVQVANLRRHLRVHTGERPYA 67
Query: 167 CSVCS 153
C +C+
Sbjct: 68 CELCA 72
Score = 45.6 bits (103), Expect = 4e-07
Identities = 20/46 (43%), Positives = 24/46 (52%)
Frame = -2
Query: 191 HTGEKPFKCSVCSKCFPRKSTLNQHMWIHSEIKRXTCKXCXKPXKQ 54
HTGEKPF+C C K F R L HM +H+ K C C + Q
Sbjct: 4 HTGEKPFECPECHKRFTRDHHLKTHMRLHTGEKPYHCSHCDRQFVQ 49
Score = 37.1 bits (82), Expect = 2e-04
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = -2
Query: 605 FTCESCGKSYATNTSLQHHIKYSCSRVGNKPM-CRTCRREFDNLEDKRHHYKDSSHCRLY 429
F C C K + + L+ H++ G KP C C R+F + + R H + + R Y
Sbjct: 10 FECPECHKRFTRDHHLKTHMRL---HTGEKPYHCSHCDRQFVQVANLRRHLRVHTGERPY 66
Query: 428 VCQECGER 405
C+ C +
Sbjct: 67 ACELCAAK 74
Score = 36.3 bits (80), Expect = 3e-04
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = -2
Query: 431 YVCQECGERFAYNREKAAHLEKVHDVPLKQHKCPECDEVFKKASSLAMHFRMVHTKDFS- 255
+ C EC +RF + H+ ++H K + C CD F + ++L H R VHT +
Sbjct: 10 FECPECHKRFTRDHHLKTHM-RLHTGE-KPYHCSHCDRQFVQVANLRRHLR-VHTGERPY 66
Query: 254 SCPSCDKK 231
+C C K
Sbjct: 67 ACELCAAK 74
Score = 26.2 bits (55), Expect = 0.29
Identities = 15/59 (25%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
Frame = -2
Query: 533 SRVGNKPM-CRTCRREFDNLEDKRHHYKDSSHCRLYVCQECGERFAYNREKAAHLEKVH 360
+ G KP C C + F + H + + + Y C C +F HL +VH
Sbjct: 3 THTGEKPFECPECHKRFTRDHHLKTHMRLHTGEKPYHCSHCDRQFVQVANLRRHL-RVH 60
>L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein
protein.
Length = 81
Score = 57.2 bits (132), Expect = 1e-10
Identities = 26/68 (38%), Positives = 34/68 (50%)
Frame = -2
Query: 347 KQHKCPECDEVFKKASSLAMHFRMVHTKDFSSCPSCDKKFPNEYKLNRHLPVHTGEKPFK 168
K C C++V+ +L MH R HT C C K F + L H+ HTGEKPF
Sbjct: 15 KSFSCKYCEKVYVSLGALKMHIR-THTLP-CKCHLCGKAFSRPWLLQGHIRTHTGEKPFS 72
Query: 167 CSVCSKCF 144
C C++ F
Sbjct: 73 CQHCNRAF 80
Score = 44.0 bits (99), Expect = 1e-06
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = -2
Query: 254 SCPSCDKKFPNEYKLNRHLPVHTGEKPFKCSVCSKCFPRKSTLNQHMWIHSEIKRXTCKX 75
SC C+K + + L H+ HT P KC +C K F R L H+ H+ K +C+
Sbjct: 18 SCKYCEKVYVSLGALKMHIRTHT--LPCKCHLCGKAFSRPWLLQGHIRTHTGEKPFSCQH 75
Query: 74 CXK 66
C +
Sbjct: 76 CNR 78
Score = 41.9 bits (94), Expect = 5e-06
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = -2
Query: 668 CGYKSVQXRSLSKHLQTHYLQFTCESCGKSYATNTSLQHHIKYSCSRVGNKPM-CRTCRR 492
C V +L H++TH L C CGK+++ LQ HI+ + G KP C+ C R
Sbjct: 22 CEKVYVSLGALKMHIRTHTLPCKCHLCGKAFSRPWLLQGHIR---THTGEKPFSCQHCNR 78
Query: 491 EF 486
F
Sbjct: 79 AF 80
Score = 29.9 bits (64), Expect = 0.023
Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = -2
Query: 605 FTCESCGKSYATNTSLQHHIKYSCSRVGNKP-MCRTCRREFDNLEDKRHHYKDSSHCRLY 429
F+C+ C K Y + +L+ HI R P C C + F + H + + + +
Sbjct: 17 FSCKYCEKVYVSLGALKMHI-----RTHTLPCKCHLCGKAFSRPWLLQGHIRTHTGEKPF 71
Query: 428 VCQECGERFA 399
CQ C FA
Sbjct: 72 SCQHCNRAFA 81
Score = 23.8 bits (49), Expect = 1.5
Identities = 11/39 (28%), Positives = 15/39 (38%)
Frame = -2
Query: 182 EKPFKCSVCSKCFPRKSTLNQHMWIHSEIKRXTCKXCXK 66
+K F C C K + L H+ H+ C C K
Sbjct: 14 KKSFSCKYCEKVYVSLGALKMHIRTHT--LPCKCHLCGK 50
>L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein
protein.
Length = 69
Score = 48.4 bits (110), Expect = 6e-08
Identities = 21/50 (42%), Positives = 26/50 (52%)
Frame = -2
Query: 221 EYKLNRHLPVHTGEKPFKCSVCSKCFPRKSTLNQHMWIHSEIKRXTCKXC 72
++ L HL H G KPFKC CS KS LN H+ HS + + C C
Sbjct: 1 KHHLEYHLRNHFGSKPFKCEKCSYSCVNKSMLNSHLKSHSNVYQYRCANC 50
Score = 32.3 bits (70), Expect = 0.004
Identities = 19/66 (28%), Positives = 25/66 (37%), Gaps = 2/66 (3%)
Frame = -2
Query: 557 QHHIKYSC-SRVGNKPM-CRTCRREFDNLEDKRHHYKDSSHCRLYVCQECGERFAYNREK 384
+HH++Y + G+KP C C N H K S+ Y C C Y
Sbjct: 1 KHHLEYHLRNHFGSKPFKCEKCSYSCVNKSMLNSHLKSHSNVYQYRCANCTYATKYCHSL 60
Query: 383 AAHLEK 366
HL K
Sbjct: 61 KLHLRK 66
Score = 29.5 bits (63), Expect = 0.031
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Frame = -2
Query: 668 CGYKSVQXRSLSKHLQTH--YLQFTCESCGKSYATN--TSLQHHI-KYS 537
C Y V L+ HL++H Q+ C +C +YAT SL+ H+ KYS
Sbjct: 22 CSYSCVNKSMLNSHLKSHSNVYQYRCANC--TYATKYCHSLKLHLRKYS 68
Score = 28.7 bits (61), Expect = 0.054
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = -2
Query: 251 CPSCDKKFPNEYKLNRHLPVHTGEKPFKCSVCSKCFPRKSTLNQHM 114
C C N+ LN HL H+ ++C+ C+ +L H+
Sbjct: 19 CEKCSYSCVNKSMLNSHLKSHSNVYQYRCANCTYATKYCHSLKLHL 64
Score = 28.3 bits (60), Expect = 0.071
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
Frame = -2
Query: 638 LSKHLQTHY--LQFTCESCGKSYATNTSLQHHIKYSCSRVGNKPMCRTCRREFDNLEDKR 465
L HL+ H+ F CE C S + L H+K S S V + C C +
Sbjct: 4 LEYHLRNHFGSKPFKCEKCSYSCVNKSMLNSHLK-SHSNV-YQYRCANCTYATKYCHSLK 61
Query: 464 HHYKDSSH 441
H + SH
Sbjct: 62 LHLRKYSH 69
Score = 27.5 bits (58), Expect = 0.12
Identities = 14/62 (22%), Positives = 27/62 (43%)
Frame = -2
Query: 464 HHYKDSSHCRLYVCQECGERFAYNREKAAHLEKVHDVPLKQHKCPECDEVFKKASSLAMH 285
+H ++ + + C++C +HL+ +V Q++C C K SL +H
Sbjct: 6 YHLRNHFGSKPFKCEKCSYSCVNKSMLNSHLKSHSNV--YQYRCANCTYATKYCHSLKLH 63
Query: 284 FR 279
R
Sbjct: 64 LR 65
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 44.0 bits (99), Expect = 1e-06
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = -2
Query: 608 QFTCESCGKSYATNTSLQHHIKYSCSRVGNKPMCRTCRREFDNLEDKRHH 459
+F CE C K + T L+ HI+ +R +P+C C+R + +L R+H
Sbjct: 2 EFRCEPCNKILTSLTRLRRHIQNVHTRPSKEPICNICKRVYSSLNSLRNH 51
Score = 32.3 bits (70), Expect = 0.004
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = -2
Query: 425 CQECGERFAYNREKAAHLEKVHDVPLKQHKCPECDEVFKKASSLAMHFRMVH 270
C+ C + H++ VH P K+ C C V+ +SL H + H
Sbjct: 5 CEPCNKILTSLTRLRRHIQNVHTRPSKEPICNICKRVYSSLNSLRNHKSIYH 56
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 37.5 bits (83), Expect = 1e-04
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = -2
Query: 431 YVCQECGERFAYNREKAAHLEKVHDVPLKQHKCPECDEVFKKASSLAMHFRMVHTK 264
Y C CG+ + H E+ H PL C C +VF+ +SL H + H +
Sbjct: 372 YTCDVCGKTLSTKLTLKRHKEQQHFQPLNSAVCALCHKVFRTLNSLNNHKSIYHRR 427
Score = 36.3 bits (80), Expect = 3e-04
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -2
Query: 605 FTCESCGKSYATNTSLQHHIKYSCSRVGNKPMCRTCRREFDNLEDKRHH 459
+TC+ CGK+ +T +L+ H + + N +C C + F L +H
Sbjct: 372 YTCDVCGKTLSTKLTLKRHKEQQHFQPLNSAVCALCHKVFRTLNSLNNH 420
Score = 24.6 bits (51), Expect = 0.87
Identities = 15/57 (26%), Positives = 19/57 (33%), Gaps = 2/57 (3%)
Frame = -2
Query: 173 FKCSVCSKCFPRKSTLNQH--MWIHSEIKRXTCKXCXKPXKQKVCWNTQMKAPTRRQ 9
+ C VC K K TL +H + C C K + N RRQ
Sbjct: 372 YTCDVCGKTLSTKLTLKRHKEQQHFQPLNSAVCALCHKVFRTLNSLNNHKSIYHRRQ 428
>AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc
finger domain-Z2 isoform protein.
Length = 71
Score = 34.3 bits (75), Expect = 0.001
Identities = 14/56 (25%), Positives = 25/56 (44%)
Frame = -2
Query: 437 RLYVCQECGERFAYNREKAAHLEKVHDVPLKQHKCPECDEVFKKASSLAMHFRMVH 270
+L+ CQ CG+ H+ H ++++C C+ V+ +SL H H
Sbjct: 4 KLFTCQLCGKVLCSKASLKRHVADKHAERQEEYRCVICERVYCSRNSLMTHIYTYH 59
Score = 29.9 bits (64), Expect = 0.023
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = -2
Query: 605 FTCESCGKSYATNTSLQHHIKYSCSRVGNKPMCRTCRREF 486
FTC+ CGK + SL+ H+ + + C C R +
Sbjct: 6 FTCQLCGKVLCSKASLKRHVADKHAERQEEYRCVICERVY 45
Score = 29.1 bits (62), Expect = 0.041
Identities = 12/56 (21%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -2
Query: 266 KDFSSCPSCDKKFPNEYKLNRHLPVHTGEKP--FKCSVCSKCFPRKSTLNQHMWIH 105
K +C C K ++ L RH+ E+ ++C +C + + +++L H++ +
Sbjct: 3 KKLFTCQLCGKVLCSKASLKRHVADKHAERQEEYRCVICERVYCSRNSLMTHIYTY 58
Score = 23.8 bits (49), Expect = 1.5
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -2
Query: 188 TGEKPFKCSVCSKCFPRKSTLNQHM 114
+ +K F C +C K K++L +H+
Sbjct: 1 SAKKLFTCQLCGKVLCSKASLKRHV 25
>AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc
finger domain-Z3 isoform protein.
Length = 92
Score = 33.1 bits (72), Expect = 0.002
Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 3/57 (5%)
Frame = -2
Query: 521 NKPM-CRTCRREFDNLEDKRHHYKD--SSHCRLYVCQECGERFAYNREKAAHLEKVH 360
N+P C CRR F + H++D LYVC+ C R+ H H
Sbjct: 3 NEPQECPYCRRNFSCYYSLKRHFQDKHEQSDTLYVCEFCNRRYRTKNSLTTHKSLQH 59
Score = 29.5 bits (63), Expect = 0.031
Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = -2
Query: 251 CPSCDKKFPNEYKLNRHL--PVHTGEKPFKCSVCSKCFPRKSTLNQH 117
CP C + F Y L RH + + C C++ + K++L H
Sbjct: 8 CPYCRRNFSCYYSLKRHFQDKHEQSDTLYVCEFCNRRYRTKNSLTTH 54
Score = 28.7 bits (61), Expect = 0.054
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 662 YKSVQXRSLSKHLQTHYLQFTCESCGKSYATNTSLQHH 549
Y S++ KH Q+ L + CE C + Y T SL H
Sbjct: 18 YYSLKRHFQDKHEQSDTL-YVCEFCNRRYRTKNSLTTH 54
Score = 26.6 bits (56), Expect = 0.22
Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = -2
Query: 338 KCPECDEVFKKASSLAMHFRMVHTKD--FSSCPSCDKKFPNEYKLNRH 201
+CP C F SL HF+ H + C C++++ + L H
Sbjct: 7 ECPYCRRNFSCYYSLKRHFQDKHEQSDTLYVCEFCNRRYRTKNSLTTH 54
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 24.6 bits (51), Expect = 0.87
Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Frame = -2
Query: 584 KSYATNT----SLQHHIKYSCSRVGNKPMCRTCRREFDNLEDKRHHYKDSSHCRLYVCQE 417
K YAT++ S H +++ SR + C R +D+R+ + +L +
Sbjct: 208 KKYATSSNSLRSRTHGFQHTSSRYSRERSCSRDRNREYRKKDRRYEKLHNEKEKLLEERT 267
Query: 416 CGERFAYNREK 384
ER++ +RE+
Sbjct: 268 SRERYSRSRER 278
>DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein.
Length = 120
Score = 24.2 bits (50), Expect = 1.2
Identities = 10/24 (41%), Positives = 14/24 (58%), Gaps = 3/24 (12%)
Frame = -3
Query: 343 NTNAPSAT---KSSKKPHPSQCIF 281
N P T K +KKP P++C+F
Sbjct: 19 NVTMPETTPRRKKNKKPLPTECVF 42
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 24.2 bits (50), Expect = 1.2
Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Frame = -2
Query: 584 KSYATNT----SLQHHIKYSCSRVGNKPMCRTCRREFDNLEDKRHHYKDSSHCRLYVCQE 417
K YAT++ S H +++ SR + C R +D+R+ + +L +
Sbjct: 208 KKYATSSNSLRSRTHGFQHTSSRYSRERSCSRDRNREYRKKDRRYEKLHNEKEKLLEERT 267
Query: 416 CGERFAYNREKAAHLEK 366
+R++ +RE+ L K
Sbjct: 268 SCKRYSRSREREQKLYK 284
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 1.2
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 98 SRYGSTYADSELTS*ENTLNTRCT 169
+R S Y D++ S ENT N CT
Sbjct: 170 NRKNSDYLDNQEVSMENTENKSCT 193
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.8 bits (49), Expect = 1.5
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = -2
Query: 539 SCSRVGNKPMCRTCRREFDNLEDKRHHYKDSSHC 438
+C R+ + R+ R + +RH Y++ +HC
Sbjct: 1663 TCDRIKRGTVIRSIRSH-STWDPRRHMYEELNHC 1695
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 23.0 bits (47), Expect = 2.7
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Frame = -2
Query: 584 KSYATNT-SLQ---HHIKYSCSRVGNKPMCRTCRREFDNLEDKRHHYKDSSHCRLYVCQE 417
K YAT++ SL+ H +++ SR + C R +D+R+ + +L +
Sbjct: 208 KKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREYKKKDRRYEKLHNEKKKLLEERT 267
Query: 416 CGERFAYNREK 384
+R++ +RE+
Sbjct: 268 SRKRYSRSRER 278
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 23.0 bits (47), Expect = 2.7
Identities = 16/71 (22%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Frame = -2
Query: 584 KSYATNT----SLQHHIKYSCSRVGNKPMCRTCRREFDNLEDKRHHYKDSSHCRLYVCQE 417
K YAT++ S H +++ SR + C R +D+R+ + +L +
Sbjct: 208 KKYATSSNSLRSRTHDFQHTSSRYSRERSCSRDRNREYKEKDRRYEKLHNEKEKLLEERT 267
Query: 416 CGERFAYNREK 384
+R++ +RE+
Sbjct: 268 SRKRYSCSRER 278
Score = 22.6 bits (46), Expect = 3.5
Identities = 15/63 (23%), Positives = 28/63 (44%)
Frame = -2
Query: 569 NTSLQHHIKYSCSRVGNKPMCRTCRREFDNLEDKRHHYKDSSHCRLYVCQECGERFAYNR 390
+TS ++ + SCSR N+ RR +K ++ + + Y C E+ +Y
Sbjct: 226 HTSSRYSRERSCSRDRNREYKEKDRRYEKLHNEKEKLLEERTSRKRYSCSREREQKSYKN 285
Query: 389 EKA 381
E +
Sbjct: 286 ENS 288
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,613
Number of Sequences: 438
Number of extensions: 4126
Number of successful extensions: 60
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20464920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -