Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_P15
         (563 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant r...    27   0.42 
AY146748-1|AAO12063.1|  279|Anopheles gambiae odorant-binding pr...    24   3.0  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   6.9  

>AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant
           receptor Or4 protein.
          Length = 397

 Score = 27.1 bits (57), Expect = 0.42
 Identities = 11/59 (18%), Positives = 32/59 (54%)
 Frame = +2

Query: 218 RLRTVESLSLLIVKLFVIIACGLCCHCYLLSVC*FFIKHTLCRDKLV*YLKERVENLCT 394
           R    + ++ +++ L V++ CG  C+  ++++C   I H     ++   + E++E++ +
Sbjct: 180 RTSVEDYITFVLIMLPVVVMCGYVCNLKVMTIC-CSIGHCTLYTRMTIEMVEQLESMAS 237


>AY146748-1|AAO12063.1|  279|Anopheles gambiae odorant-binding
           protein AgamOBP41 protein.
          Length = 279

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 12/47 (25%), Positives = 25/47 (53%)
 Frame = -2

Query: 403 NIRRTQIFYPFF*VLHQFVTA*CMFYKKSTNTQQIAMATKSTSNYNK 263
           N+R+  +F P   +  Q VT+ CM   + T  Q ++++ ++    +K
Sbjct: 145 NLRQDSVFVPLDHLQLQHVTSRCMDVHQITTEQLMSLSAEAMDANDK 191


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.0 bits (47), Expect = 6.9
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = -3

Query: 546 IRSPKHGEQARAFSF 502
           ++SP+HG ++RA +F
Sbjct: 505 VQSPRHGHESRANNF 519


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 565,150
Number of Sequences: 2352
Number of extensions: 11494
Number of successful extensions: 36
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52983882
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)