Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_P13
         (612 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    23   2.7  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    23   2.7  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    23   2.7  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    23   2.7  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    23   2.7  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    23   2.7  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    23   2.7  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    23   2.7  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   3.5  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           22   4.7  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   8.2  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   8.2  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   8.2  

>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 12/55 (21%), Positives = 22/55 (40%)
 Frame = -3

Query: 346 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 182
           H + P    Y   + +R+A+     P   TH   + +Y D       +   D++T
Sbjct: 64  HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 12/55 (21%), Positives = 22/55 (40%)
 Frame = -3

Query: 346 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 182
           H + P    Y   + +R+A+     P   TH   + +Y D       +   D++T
Sbjct: 64  HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 12/55 (21%), Positives = 22/55 (40%)
 Frame = -3

Query: 346 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 182
           H + P    Y   + +R+A+     P   TH   + +Y D       +   D++T
Sbjct: 64  HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 12/55 (21%), Positives = 22/55 (40%)
 Frame = -3

Query: 346 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 182
           H + P    Y   + +R+A+     P   TH   + +Y D       +   D++T
Sbjct: 64  HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 12/55 (21%), Positives = 22/55 (40%)
 Frame = -3

Query: 346 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 182
           H + P    Y   + +R+A+     P   TH   + +Y D       +   D++T
Sbjct: 64  HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 12/55 (21%), Positives = 22/55 (40%)
 Frame = -3

Query: 346 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 182
           H + P    Y   + +R+A+     P   TH   + +Y D       +   D++T
Sbjct: 20  HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 74


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 12/55 (21%), Positives = 22/55 (40%)
 Frame = -3

Query: 346 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 182
           H + P    Y   + +R+A+     P   TH   + +Y D       +   D++T
Sbjct: 64  HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 12/55 (21%), Positives = 22/55 (40%)
 Frame = -3

Query: 346 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 182
           H + P    Y   + +R+A+     P   TH   + +Y D       +   D++T
Sbjct: 64  HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 132 IIHKFPDSNLMKSIIFVVAMSNWMESL 212
           II +F    L   +  VV +SNW E L
Sbjct: 239 IIARFNIERLCNGLKRVVKLSNWREPL 265


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 12/55 (21%), Positives = 21/55 (38%)
 Frame = -3

Query: 346 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 182
           H + P    Y   + +R+A      P   TH   + +Y D       +   D++T
Sbjct: 64  HGLQPTMGDYTQLQPQRLAPTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = -3

Query: 532 NRXKYALTGNEVLKIVKQRLIK 467
           N  +  L  N++LK++++ L+K
Sbjct: 386 NISREMLQQNKILKVIRKNLVK 407


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +3

Query: 33  CPVESLMCTMSKEPGCLSRDTMVPTRPKLR 122
           C V+S     +K  GC S ++ V T   LR
Sbjct: 95  CSVKSESSQAAKYGGCFSGESTVLTSTGLR 124


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -1

Query: 330 RRLSTSCVKSSVWRPDLRMFR 268
           R+++  C+KS  WR  L + +
Sbjct: 525 RKVTFQCLKSIAWRAFLAVLK 545


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,034
Number of Sequences: 336
Number of extensions: 3319
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15561709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)