Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_P13
         (612 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011369-1|AAR96161.1|  261|Drosophila melanogaster RE57333p pro...   350   1e-96
AE014296-2240|AAF49846.1|  261|Drosophila melanogaster CG11276-P...   350   1e-96
AE014296-2239|AAF49847.1|  261|Drosophila melanogaster CG11276-P...   350   1e-96
D16257-1|BAA03786.1|  261|Drosophila melanogaster ribosomal prot...   344   5e-95
AF114160-1|AAD26161.2| 2077|Drosophila melanogaster adherin Nipp...    29   6.5  
AE013599-26|EAA46003.3| 2077|Drosophila melanogaster CG17704-PF,...    29   6.5  
AE013599-25|EAA46004.3| 2077|Drosophila melanogaster CG17704-PE,...    29   6.5  

>BT011369-1|AAR96161.1|  261|Drosophila melanogaster RE57333p
           protein.
          Length = 261

 Score =  350 bits (860), Expect = 1e-96
 Identities = 159/201 (79%), Positives = 177/201 (88%)
 Frame = -3

Query: 607 GVYAPRPSTGPHKLRECLPXVIFLRNRXKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPA 428
           GV+APRPSTGPHKLRE LP +IFLRNR KYAL G EV KIV QRL+KVDGKVRTDPTYPA
Sbjct: 25  GVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQRLVKVDGKVRTDPTYPA 84

Query: 427 GFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDG 248
           G+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+   G K VP+LVTHDG
Sbjct: 85  GYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDG 144

Query: 247 RTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGS 68
           RTIRYPDPLI  NDS+Q+DIA+ KI D+IKF+SGNLCMITGGRNLGRVGT+V+RERHPGS
Sbjct: 145 RTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGTVVNRERHPGS 204

Query: 67  FDIVHIKDSTGHTXATRLNNV 5
           FDIVHIKDS GH  ATRL NV
Sbjct: 205 FDIVHIKDSQGHVFATRLTNV 225


>AE014296-2240|AAF49846.1|  261|Drosophila melanogaster CG11276-PB,
           isoform B protein.
          Length = 261

 Score =  350 bits (860), Expect = 1e-96
 Identities = 159/201 (79%), Positives = 177/201 (88%)
 Frame = -3

Query: 607 GVYAPRPSTGPHKLRECLPXVIFLRNRXKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPA 428
           GV+APRPSTGPHKLRE LP +IFLRNR KYAL G EV KIV QRL+KVDGKVRTDPTYPA
Sbjct: 25  GVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQRLVKVDGKVRTDPTYPA 84

Query: 427 GFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDG 248
           G+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+   G K VP+LVTHDG
Sbjct: 85  GYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDG 144

Query: 247 RTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGS 68
           RTIRYPDPLI  NDS+Q+DIA+ KI D+IKF+SGNLCMITGGRNLGRVGT+V+RERHPGS
Sbjct: 145 RTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGTVVNRERHPGS 204

Query: 67  FDIVHIKDSTGHTXATRLNNV 5
           FDIVHIKDS GH  ATRL NV
Sbjct: 205 FDIVHIKDSQGHVFATRLTNV 225


>AE014296-2239|AAF49847.1|  261|Drosophila melanogaster CG11276-PA,
           isoform A protein.
          Length = 261

 Score =  350 bits (860), Expect = 1e-96
 Identities = 159/201 (79%), Positives = 177/201 (88%)
 Frame = -3

Query: 607 GVYAPRPSTGPHKLRECLPXVIFLRNRXKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPA 428
           GV+APRPSTGPHKLRE LP +IFLRNR KYAL G EV KIV QRL+KVDGKVRTDPTYPA
Sbjct: 25  GVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQRLVKVDGKVRTDPTYPA 84

Query: 427 GFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDG 248
           G+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+   G K VP+LVTHDG
Sbjct: 85  GYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDG 144

Query: 247 RTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGS 68
           RTIRYPDPLI  NDS+Q+DIA+ KI D+IKF+SGNLCMITGGRNLGRVGT+V+RERHPGS
Sbjct: 145 RTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGTVVNRERHPGS 204

Query: 67  FDIVHIKDSTGHTXATRLNNV 5
           FDIVHIKDS GH  ATRL NV
Sbjct: 205 FDIVHIKDSQGHVFATRLTNV 225


>D16257-1|BAA03786.1|  261|Drosophila melanogaster ribosomal protein
           S4 protein.
          Length = 261

 Score =  344 bits (846), Expect = 5e-95
 Identities = 157/201 (78%), Positives = 175/201 (87%)
 Frame = -3

Query: 607 GVYAPRPSTGPHKLRECLPXVIFLRNRXKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPA 428
           GV+APRPSTGPHKLRE LP + FLRNR KYAL G EV KIV QRL+KV GKVRTDPTYPA
Sbjct: 25  GVFAPRPSTGPHKLRESLPLLTFLRNRLKYALNGAEVTKIVMQRLVKVYGKVRTDPTYPA 84

Query: 427 GFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDG 248
           G+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+   G K VP+LVTHDG
Sbjct: 85  GYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDG 144

Query: 247 RTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGS 68
           RTIRYPDPLI  NDS+Q+DIA+ KI D+IKF+SGNLCMITGGRNLGRVGT+V+RERHPGS
Sbjct: 145 RTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGTVVNRERHPGS 204

Query: 67  FDIVHIKDSTGHTXATRLNNV 5
           FDIVHIKDS GH  ATRL NV
Sbjct: 205 FDIVHIKDSQGHVFATRLTNV 225


>AF114160-1|AAD26161.2| 2077|Drosophila melanogaster adherin Nipped-B
            protein.
          Length = 2077

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
 Frame = +2

Query: 242  GAAIMRY-QVRNILRSGRH-TLDFTQLVLSLLRGDTVDCESALNIID*TKQFISL 400
            G  ++RY   + I +S R  +LD+  +V + LR DTV+    +NIID   Q I L
Sbjct: 888  GTMLVRYVSDKGIEQSIRLVSLDYLGIVAARLRKDTVESRCRVNIIDSMIQSIKL 942


>AE013599-26|EAA46003.3| 2077|Drosophila melanogaster CG17704-PF,
            isoform F protein.
          Length = 2077

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
 Frame = +2

Query: 242  GAAIMRY-QVRNILRSGRH-TLDFTQLVLSLLRGDTVDCESALNIID*TKQFISL 400
            G  ++RY   + I +S R  +LD+  +V + LR DTV+    +NIID   Q I L
Sbjct: 888  GTMLVRYVSDKGIEQSIRLVSLDYLGIVAARLRKDTVESRCRVNIIDSMIQSIKL 942


>AE013599-25|EAA46004.3| 2077|Drosophila melanogaster CG17704-PE,
            isoform E protein.
          Length = 2077

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
 Frame = +2

Query: 242  GAAIMRY-QVRNILRSGRH-TLDFTQLVLSLLRGDTVDCESALNIID*TKQFISL 400
            G  ++RY   + I +S R  +LD+  +V + LR DTV+    +NIID   Q I L
Sbjct: 888  GTMLVRYVSDKGIEQSIRLVSLDYLGIVAARLRKDTVESRCRVNIIDSMIQSIKL 942


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,115,867
Number of Sequences: 53049
Number of extensions: 651904
Number of successful extensions: 1575
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1575
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)