Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_P11
         (787 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    27   0.13 
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      22   4.8  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   6.4  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    22   6.4  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    22   6.4  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          22   6.4  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    21   8.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.4  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   8.4  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   8.4  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 27.5 bits (58), Expect = 0.13
 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = -3

Query: 215 MIQENGYLTPEKLSQIANVSXLLARERLFTTE-RLGLACRDESIEGLAF 72
           M+QE    TP+++ Q+  +S  L R   F+     GL    + +  LAF
Sbjct: 287 MLQEEDIFTPDRIPQLEEMSNFLKRHTGFSLRPAAGLLTARDFLASLAF 335


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 329 CKHSISLLAIQALSPWLGL 385
           CK  ++ LAI  ++ W G+
Sbjct: 14  CKEKLNTLAISVMNQWPGV 32


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 683 YSDLWLYAVLLY 718
           YSD+W + VLL+
Sbjct: 674 YSDVWSFGVLLW 685


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/31 (25%), Positives = 14/31 (45%)
 Frame = +3

Query: 645 LH*LSEVLKRHTYTLICGSMLXFYTSFNSYN 737
           LH +  + + HT  L+C  +  F   +   N
Sbjct: 110 LHQICHICELHTIFLVCNVLTVFKIRYKDLN 140


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 646 RRQKKWYLYQRIFLQK*GKNKVIFQK 569
           R+ K W+  +R+  +K  KNKV+  K
Sbjct: 127 RQIKIWFQNRRMKFKKEEKNKVVTPK 152


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 646 RRQKKWYLYQRIFLQK*GKNKVIFQK 569
           R+ K W+  +R+  +K  KNKV+  K
Sbjct: 147 RQIKIWFQNRRMKFKKEEKNKVVTPK 172


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 136 DYLLRKDLAWRAVTSQLKAWL 74
           D   R+  A R  T+ LKAWL
Sbjct: 83  DLAARRKNATRESTATLKAWL 103


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 579 ITLFFPYFCRNIL**RYHFFC 641
           I L   YFCR  +    HF+C
Sbjct: 294 ILLCIYYFCRAFIIFPTHFYC 314


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 287 IFGVTWERLQFVVICKHSISLL 352
           IFG+ W  L FVV+   + ++L
Sbjct: 240 IFGLVWISLIFVVLIGDAYAVL 261


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 287 IFGVTWERLQFVVICKHSISLL 352
           IFG+ W  L FVV+   + ++L
Sbjct: 240 IFGLVWISLIFVVLIGDAYAVL 261


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,870
Number of Sequences: 336
Number of extensions: 3793
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)