Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_P11
(787 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC050439-1|AAH50439.1| 386|Homo sapiens vacuolar protein sortin... 263 6e-70
BC037279-1|AAH37279.1| 386|Homo sapiens vacuolar protein sortin... 263 6e-70
AL359513-3|CAH71658.1| 386|Homo sapiens vacuolar protein sortin... 263 6e-70
AK023182-1|BAB14451.1| 261|Homo sapiens protein ( Homo sapiens ... 263 6e-70
AF151903-1|AAD34140.1| 386|Homo sapiens CGI-145 protein protein. 261 2e-69
AB208956-1|BAD92193.1| 224|Homo sapiens Hypothetical protein FL... 238 2e-62
BC038830-1|AAH38830.1| 257|Homo sapiens SNF8, ESCRT-II complex ... 46 1e-04
BC008976-1|AAH08976.1| 258|Homo sapiens SNF8, ESCRT-II complex ... 43 0.001
AF156102-1|AAD46560.1| 258|Homo sapiens ELL complex EAP30 subun... 43 0.001
U33822-1|AAC52059.1| 803|Homo sapiens TXBP181 protein. 31 6.2
>BC050439-1|AAH50439.1| 386|Homo sapiens vacuolar protein sorting
36 homolog (S. cerevisiae) protein.
Length = 386
Score = 263 bits (644), Expect = 6e-70
Identities = 123/231 (53%), Positives = 179/231 (77%), Gaps = 1/231 (0%)
Frame = -3
Query: 752 KIRS-GIVGIERSIEXQHRATDQSISVAFQDLTKLMEKAKEMVSLSKNISTKIREKQGDI 576
+IR+ GIVGIER +E + + TD++IS AF+DL+KLM KAKEMV LSK+I+ KI++KQGDI
Sbjct: 150 RIRAVGIVGIERKLEEKRKETDKNISEAFEDLSKLMIKAKEMVELSKSIANKIKDKQGDI 209
Query: 575 SEDDTVRFKSYLMSLGIDDPVTRDAFRSDSEYYLGLAQQVSDMMVAVLLECGGIMSLADV 396
+ED+T+RFKSYL+S+GI +PVTR+ + S ++Y++ LA+Q++ ++ L E GGIMSL +V
Sbjct: 210 TEDETIRFKSYLLSMGIANPVTRETYGSGTQYHMQLAKQLAGILQVPLEERGGIMSLTEV 269
Query: 395 WCRVNRARGLELVSPEDLLNACKLLRTVDAPMSLRKFPSGACVLQLNSNRDEEIAKSTSD 216
+C VNRARG+EL+SPEDL+NACK+L + P+ LR F SG V++L S+++EE+ S +
Sbjct: 270 YCLVNRARGMELLSPEDLVNACKMLEALKLPLRLRVFDSGVMVIELQSHKEEEMVASALE 329
Query: 215 MIQENGYLTPEKLSQIANVSXLLARERLFTTERLGLACRDESIEGLAFDPN 63
+ E G LT E+ +++ +S LLA+ERL E++G CRD+S+EGL F PN
Sbjct: 330 TVSEKGSLTSEEFAKLVGMSVLLAKERLLLAEKMGHLCRDDSVEGLRFYPN 380
>BC037279-1|AAH37279.1| 386|Homo sapiens vacuolar protein sorting
36 homolog (S. cerevisiae) protein.
Length = 386
Score = 263 bits (644), Expect = 6e-70
Identities = 123/231 (53%), Positives = 179/231 (77%), Gaps = 1/231 (0%)
Frame = -3
Query: 752 KIRS-GIVGIERSIEXQHRATDQSISVAFQDLTKLMEKAKEMVSLSKNISTKIREKQGDI 576
+IR+ GIVGIER +E + + TD++IS AF+DL+KLM KAKEMV LSK+I+ KI++KQGDI
Sbjct: 150 RIRAVGIVGIERKLEEKRKETDKNISEAFEDLSKLMIKAKEMVELSKSIANKIKDKQGDI 209
Query: 575 SEDDTVRFKSYLMSLGIDDPVTRDAFRSDSEYYLGLAQQVSDMMVAVLLECGGIMSLADV 396
+ED+T+RFKSYL+S+GI +PVTR+ + S ++Y++ LA+Q++ ++ L E GGIMSL +V
Sbjct: 210 TEDETIRFKSYLLSMGIANPVTRETYGSGTQYHMQLAKQLAGILQVPLEERGGIMSLTEV 269
Query: 395 WCRVNRARGLELVSPEDLLNACKLLRTVDAPMSLRKFPSGACVLQLNSNRDEEIAKSTSD 216
+C VNRARG+EL+SPEDL+NACK+L + P+ LR F SG V++L S+++EE+ S +
Sbjct: 270 YCLVNRARGMELLSPEDLVNACKMLEALKLPLRLRVFDSGVMVIELQSHKEEEMVASALE 329
Query: 215 MIQENGYLTPEKLSQIANVSXLLARERLFTTERLGLACRDESIEGLAFDPN 63
+ E G LT E+ +++ +S LLA+ERL E++G CRD+S+EGL F PN
Sbjct: 330 TVSEKGSLTSEEFAKLVGMSVLLAKERLLLAEKMGHLCRDDSVEGLRFYPN 380
>AL359513-3|CAH71658.1| 386|Homo sapiens vacuolar protein sorting
36 (yeast) protein.
Length = 386
Score = 263 bits (644), Expect = 6e-70
Identities = 123/231 (53%), Positives = 179/231 (77%), Gaps = 1/231 (0%)
Frame = -3
Query: 752 KIRS-GIVGIERSIEXQHRATDQSISVAFQDLTKLMEKAKEMVSLSKNISTKIREKQGDI 576
+IR+ GIVGIER +E + + TD++IS AF+DL+KLM KAKEMV LSK+I+ KI++KQGDI
Sbjct: 150 RIRAVGIVGIERKLEEKRKETDKNISEAFEDLSKLMIKAKEMVELSKSIANKIKDKQGDI 209
Query: 575 SEDDTVRFKSYLMSLGIDDPVTRDAFRSDSEYYLGLAQQVSDMMVAVLLECGGIMSLADV 396
+ED+T+RFKSYL+S+GI +PVTR+ + S ++Y++ LA+Q++ ++ L E GGIMSL +V
Sbjct: 210 TEDETIRFKSYLLSMGIANPVTRETYGSGTQYHMQLAKQLAGILQVPLEERGGIMSLTEV 269
Query: 395 WCRVNRARGLELVSPEDLLNACKLLRTVDAPMSLRKFPSGACVLQLNSNRDEEIAKSTSD 216
+C VNRARG+EL+SPEDL+NACK+L + P+ LR F SG V++L S+++EE+ S +
Sbjct: 270 YCLVNRARGMELLSPEDLVNACKMLEALKLPLRLRVFDSGVMVIELQSHKEEEMVASALE 329
Query: 215 MIQENGYLTPEKLSQIANVSXLLARERLFTTERLGLACRDESIEGLAFDPN 63
+ E G LT E+ +++ +S LLA+ERL E++G CRD+S+EGL F PN
Sbjct: 330 TVSEKGSLTSEEFAKLVGMSVLLAKERLLLAEKMGHLCRDDSVEGLRFYPN 380
>AK023182-1|BAB14451.1| 261|Homo sapiens protein ( Homo sapiens
cDNA FLJ13120 fis, clone NT2RP3002682, highly similar to
Homo sapiens CGI-145 protein mRNA. ).
Length = 261
Score = 263 bits (644), Expect = 6e-70
Identities = 123/231 (53%), Positives = 179/231 (77%), Gaps = 1/231 (0%)
Frame = -3
Query: 752 KIRS-GIVGIERSIEXQHRATDQSISVAFQDLTKLMEKAKEMVSLSKNISTKIREKQGDI 576
+IR+ GIVGIER +E + + TD++IS AF+DL+KLM KAKEMV LSK+I+ KI++KQGDI
Sbjct: 25 RIRAVGIVGIERKLEEKRKETDKNISEAFEDLSKLMIKAKEMVELSKSIANKIKDKQGDI 84
Query: 575 SEDDTVRFKSYLMSLGIDDPVTRDAFRSDSEYYLGLAQQVSDMMVAVLLECGGIMSLADV 396
+ED+T+RFKSYL+S+GI +PVTR+ + S ++Y++ LA+Q++ ++ L E GGIMSL +V
Sbjct: 85 TEDETIRFKSYLLSMGIANPVTRETYGSGTQYHMQLAKQLAGILQVPLEERGGIMSLTEV 144
Query: 395 WCRVNRARGLELVSPEDLLNACKLLRTVDAPMSLRKFPSGACVLQLNSNRDEEIAKSTSD 216
+C VNRARG+EL+SPEDL+NACK+L + P+ LR F SG V++L S+++EE+ S +
Sbjct: 145 YCLVNRARGMELLSPEDLVNACKMLEALKLPLRLRVFDSGVMVIELQSHKEEEMVASALE 204
Query: 215 MIQENGYLTPEKLSQIANVSXLLARERLFTTERLGLACRDESIEGLAFDPN 63
+ E G LT E+ +++ +S LLA+ERL E++G CRD+S+EGL F PN
Sbjct: 205 TVSEKGSLTSEEFAKLVGMSVLLAKERLLLAEKMGHLCRDDSVEGLRFYPN 255
>AF151903-1|AAD34140.1| 386|Homo sapiens CGI-145 protein protein.
Length = 386
Score = 261 bits (639), Expect = 2e-69
Identities = 122/231 (52%), Positives = 178/231 (77%), Gaps = 1/231 (0%)
Frame = -3
Query: 752 KIRS-GIVGIERSIEXQHRATDQSISVAFQDLTKLMEKAKEMVSLSKNISTKIREKQGDI 576
+IR+ GIVGIER +E + + TD++IS AF+DL+KLM KAKEMV LSK+I+ KI++KQGDI
Sbjct: 150 RIRAVGIVGIERKLEEKRKETDKNISEAFEDLSKLMIKAKEMVELSKSIANKIKDKQGDI 209
Query: 575 SEDDTVRFKSYLMSLGIDDPVTRDAFRSDSEYYLGLAQQVSDMMVAVLLECGGIMSLADV 396
+ED+T+RFKSYL+ +GI +PVTR+ + S ++Y++ LA+Q++ ++ L E GGIMSL +V
Sbjct: 210 TEDETIRFKSYLLRMGIANPVTRETYGSGTQYHMQLAKQLAGILQVPLEERGGIMSLTEV 269
Query: 395 WCRVNRARGLELVSPEDLLNACKLLRTVDAPMSLRKFPSGACVLQLNSNRDEEIAKSTSD 216
+C VNRARG+EL+SPEDL+NACK+L + P+ LR F SG V++L S+++EE+ S +
Sbjct: 270 YCLVNRARGMELLSPEDLVNACKMLEALKLPLRLRVFDSGVMVIELQSHKEEEMVASALE 329
Query: 215 MIQENGYLTPEKLSQIANVSXLLARERLFTTERLGLACRDESIEGLAFDPN 63
+ E G LT E+ +++ +S LLA+ERL E++G CRD+S+EGL F PN
Sbjct: 330 TVSEKGSLTSEEFAKLVGMSVLLAKERLLLAEKMGHLCRDDSVEGLRFYPN 380
>AB208956-1|BAD92193.1| 224|Homo sapiens Hypothetical protein
FLJ13120 variant protein.
Length = 224
Score = 238 bits (582), Expect = 2e-62
Identities = 109/204 (53%), Positives = 158/204 (77%)
Frame = -3
Query: 674 AFQDLTKLMEKAKEMVSLSKNISTKIREKQGDISEDDTVRFKSYLMSLGIDDPVTRDAFR 495
AF+DL+KLM KAKEMV LSK+I+ KI++KQGDI+ED+T+RFKSYL+S+GI +PVTR+ +
Sbjct: 15 AFEDLSKLMIKAKEMVELSKSIANKIKDKQGDITEDETIRFKSYLLSMGIANPVTRETYG 74
Query: 494 SDSEYYLGLAQQVSDMMVAVLLECGGIMSLADVWCRVNRARGLELVSPEDLLNACKLLRT 315
S ++Y++ LA+Q++ ++ L E GGIMSL +V+C VNRARG+EL+SPEDL+NACK+L
Sbjct: 75 SGTQYHMQLAKQLAGILQVPLEERGGIMSLTEVYCLVNRARGMELLSPEDLVNACKMLEA 134
Query: 314 VDAPMSLRKFPSGACVLQLNSNRDEEIAKSTSDMIQENGYLTPEKLSQIANVSXLLARER 135
+ P+ LR F SG V++L S+++EE+ S + + E G LT E+ +++ +S LLA+ER
Sbjct: 135 LKLPLRLRVFDSGVMVIELQSHKEEEMVASALETVSEKGSLTSEEFAKLVGMSVLLAKER 194
Query: 134 LFTTERLGLACRDESIEGLAFDPN 63
L E++G CRD+S+EGL F PN
Sbjct: 195 LLLAEKMGHLCRDDSVEGLRFYPN 218
>BC038830-1|AAH38830.1| 257|Homo sapiens SNF8, ESCRT-II complex
subunit, homolog (S. cerevisiae) protein.
Length = 257
Score = 46.4 bits (105), Expect = 1e-04
Identities = 44/202 (21%), Positives = 92/202 (45%), Gaps = 8/202 (3%)
Frame = -3
Query: 656 KLMEKAKEMVSLSKNISTKIREKQGDISEDDT--VRFKSYLMSLGIDDPVTRDAFRSD-- 489
+L + +K++ N+ + + +I ++ V+F+ ++G+D + F S+
Sbjct: 32 QLAQMSKQLDMFKTNLEEFASKHKQEIRKNPEFRVQFQDMCATIGVDPLASGKGFWSEML 91
Query: 488 --SEYYLGLAQQVSDMMVAVLLECGGIMSLADVWCRVNRARG--LELVSPEDLLNACKLL 321
++Y L Q+ ++ +A+ GG+++L ++ +V + RG + VS +DL+ A K L
Sbjct: 92 GVGDFYYELGVQIIEVCLALKHRNGGLITLEELHQQVLKGRGKFAQDVSQDDLIRAIKKL 151
Query: 320 RTVDAPMSLRKFPSGACVLQLNSNRDEEIAKSTSDMIQENGYLTPEKLSQIANVSXLLAR 141
+ + + P G L + + + + + ENGY+T ++ AR
Sbjct: 152 KALGTGFGI--IPVGGTYLIQSVPAELNMDHTVVLQLAENGYVTVSEIKASLKWETERAR 209
Query: 140 ERLFTTERLGLACRDESIEGLA 75
+ L + GLA D G A
Sbjct: 210 QVLEHLLKEGLAWLDLQAPGEA 231
>BC008976-1|AAH08976.1| 258|Homo sapiens SNF8, ESCRT-II complex
subunit, homolog (S. cerevisiae) protein.
Length = 258
Score = 42.7 bits (96), Expect = 0.001
Identities = 43/203 (21%), Positives = 93/203 (45%), Gaps = 9/203 (4%)
Frame = -3
Query: 656 KLMEKAKEMVSLSKNISTKIREKQGDISEDDT--VRFKSYLMSLGIDDPVTRDAFRSD-- 489
+L + +K++ N+ + + +I ++ V+F+ ++G+D + F S+
Sbjct: 32 QLAQMSKQLDMFKTNLEEFASKHKQEIRKNPEFRVQFQDMCATIGVDPLASGKGFWSEML 91
Query: 488 --SEYYLGLAQQVSDMMVAVLLECGGIMSLADVWCRVNRARG--LELVSPEDLLNACKLL 321
++Y L Q+ ++ +A+ GG+++L ++ +V + RG + VS +DL+ A K L
Sbjct: 92 GVGDFYYELGVQIIEVCLALKHRNGGLITLEELHQQVLKGRGKFAQDVSQDDLIRAIKKL 151
Query: 320 RTVDAPMSLRKFPSGACVLQLNSNRDEEIAKS-TSDMIQENGYLTPEKLSQIANVSXLLA 144
+ + + P G L + + + + + ++NGY+T ++ A
Sbjct: 152 KALGTGFGI--IPVGGTYLIQSVPAELNMDHTVVLQLAEKNGYVTVSEIKASLKWETERA 209
Query: 143 RERLFTTERLGLACRDESIEGLA 75
R+ L + GLA D G A
Sbjct: 210 RQVLEHLLKEGLAWLDLQAPGEA 232
>AF156102-1|AAD46560.1| 258|Homo sapiens ELL complex EAP30 subunit
protein.
Length = 258
Score = 42.7 bits (96), Expect = 0.001
Identities = 43/203 (21%), Positives = 93/203 (45%), Gaps = 9/203 (4%)
Frame = -3
Query: 656 KLMEKAKEMVSLSKNISTKIREKQGDISEDDT--VRFKSYLMSLGIDDPVTRDAFRSD-- 489
+L + +K++ N+ + + +I ++ V+F+ ++G+D + F S+
Sbjct: 32 QLAQMSKQLDMFKTNLEEFASKHKQEIRKNPEFRVQFQDMCATIGVDPLASGKGFWSEML 91
Query: 488 --SEYYLGLAQQVSDMMVAVLLECGGIMSLADVWCRVNRARG--LELVSPEDLLNACKLL 321
++Y L Q+ ++ +A+ GG+++L ++ +V + RG + VS +DL+ A K L
Sbjct: 92 GVGDFYYELGVQIIEVCLALKHRNGGLITLEELHQQVLKGRGKFAQDVSQDDLIRAIKKL 151
Query: 320 RTVDAPMSLRKFPSGACVLQLNSNRDEEIAKS-TSDMIQENGYLTPEKLSQIANVSXLLA 144
+ + + P G L + + + + + ++NGY+T ++ A
Sbjct: 152 KALGTGFGI--IPVGGTYLIQSVPAELNMDHTVVLQLAEKNGYVTVSEIKASLKWETERA 209
Query: 143 RERLFTTERLGLACRDESIEGLA 75
R+ L + GLA D G A
Sbjct: 210 RQVLEHLLKEGLAWLDLQAPGEA 232
>U33822-1|AAC52059.1| 803|Homo sapiens TXBP181 protein.
Length = 803
Score = 30.7 bits (66), Expect = 6.2
Identities = 21/109 (19%), Positives = 55/109 (50%)
Frame = -3
Query: 668 QDLTKLMEKAKEMVSLSKNISTKIREKQGDISEDDTVRFKSYLMSLGIDDPVTRDAFRSD 489
+DL + + ++ ++ KN+ +++ E + +R +S L + + + ++
Sbjct: 226 KDLEQKLSLQEQDAAIVKNMKSELVRLPRLERELEQLREESALREMRETNGLLQEELEG- 284
Query: 488 SEYYLGLAQQVSDMMVAVLLECGGIMSLADVWCRVNRARGLELVSPEDL 342
+ LG +++ + +V + LE +++ W R+++ GL + +PEDL
Sbjct: 285 LQRKLGRQEKMQETLVGLELENERLLAKLQSWERLDQTMGLSIRTPEDL 333
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,282,122
Number of Sequences: 237096
Number of extensions: 2289071
Number of successful extensions: 3841
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3838
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9590293096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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