Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_P11
(787 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72507-14|CAA96630.2| 383|Caenorhabditis elegans Hypothetical p... 235 3e-62
U40419-2|AAK67217.1| 269|Caenorhabditis elegans Hypothetical pr... 40 0.003
AF026214-7|AAP68943.1| 640|Caenorhabditis elegans Hypothetical ... 35 0.076
Z81030-1|CAB02703.1| 1204|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z70307-13|CAA94339.1| 354|Caenorhabditis elegans Hypothetical p... 29 3.8
AF098504-3|AAK73898.4| 2395|Caenorhabditis elegans Leucine-rich ... 29 3.8
AB297384-1|BAF48647.1| 2393|Caenorhabditis elegans PARK8-related... 29 3.8
AC024793-1|AAF60692.2| 649|Caenorhabditis elegans Atm (ataxia t... 28 6.6
AC006708-5|AAF60428.2| 254|Caenorhabditis elegans Hypothetical ... 28 8.7
>Z72507-14|CAA96630.2| 383|Caenorhabditis elegans Hypothetical
protein F17C11.8 protein.
Length = 383
Score = 235 bits (574), Expect = 3e-62
Identities = 109/228 (47%), Positives = 163/228 (71%), Gaps = 1/228 (0%)
Frame = -3
Query: 740 GIVGIERSIEXQHRATDQSISVAFQDLTKLMEKAKEMVSLSKNISTKIREKQGDISEDDT 561
GI GIER + H+ T ++I+ AF D++KLME A+EMV+LSK+IS K+R ++G+ISED+T
Sbjct: 153 GISGIERRLAENHQKTHETITQAFDDMSKLMETAREMVALSKSISEKVRSRKGEISEDET 212
Query: 560 VRFKSYLMSLGIDDPVTRDAF-RSDSEYYLGLAQQVSDMMVAVLLECGGIMSLADVWCRV 384
+ FKSYL+SLG+ DPVT+ F SDSEY+ LA+++SD++ + E GG+ +L +V+CR+
Sbjct: 213 IAFKSYLLSLGVSDPVTKSTFVGSDSEYFQKLAKEISDVLYEHIKENGGMCALPEVYCRI 272
Query: 383 NRARGLELVSPEDLLNACKLLRTVDAPMSLRKFPSGACVLQLNSNRDEEIAKSTSDMIQE 204
NRARG+EL+SPED++NAC L +++P+ L +FPSG V+QL S + T + + +
Sbjct: 273 NRARGMELLSPEDVMNACGALSRINSPLELHRFPSGVLVVQLKSASMDSTVGQTLEFVSK 332
Query: 203 NGYLTPEKLSQIANVSXLLARERLFTTERLGLACRDESIEGLAFDPNK 60
+ +L++ ++ +LARERL E GL CRD+SIEGL F PN+
Sbjct: 333 LERASANELAESLGITVILARERLLAAEESGLICRDDSIEGLLFYPNR 380
>U40419-2|AAK67217.1| 269|Caenorhabditis elegans Hypothetical
protein C27F2.5 protein.
Length = 269
Score = 39.5 bits (88), Expect = 0.003
Identities = 43/227 (18%), Positives = 94/227 (41%), Gaps = 9/227 (3%)
Frame = -3
Query: 746 RSGIVGIERSIEXQHRATDQSISVAFQDLTKLMEKAKEMVSLSKNISTKIREKQGDISED 567
R G+ I++ E ++ + +A + L + ++ ++ LS + + + +I ++
Sbjct: 6 RIGVAAIQKKQETANKFAAKGDQMAGEQLVQFSQQLEQ---LSAGLEMFAQRHRDEIKKN 62
Query: 566 DTVR--FKSYLMSLGIDDPVTRDAFRSDS----EYYLGLAQQVSDMMVAVLLECGGIMSL 405
R F+ S+G+D + F + + ++Y L Q+ ++ ++ GGIM++
Sbjct: 63 SQFRRHFQEMCASVGVDPLASSKGFWAKALGFGDFYYELGIQIVEICLSTTHINGGIMTV 122
Query: 404 ADVWCRVNRARG---LELVSPEDLLNACKLLRTVDAPMSLRKFPSGACVLQLNSNRDEEI 234
++ R+ R R + +S +D+L A L+ + L G ++Q
Sbjct: 123 EEIRNRLMRTRSRTRKDTISTDDILRAVDKLKVLGNGFELVPLGGGRFLVQSVPGELSMD 182
Query: 233 AKSTSDMIQENGYLTPEKLSQIANVSXLLARERLFTTERLGLACRDE 93
+ ++ Y+T E + A L + GLA DE
Sbjct: 183 HSRVLQLAEDAAYVTKELIIDKLRWDEARASSALEHLVKEGLAWTDE 229
>AF026214-7|AAP68943.1| 640|Caenorhabditis elegans Hypothetical
protein F52H2.1 protein.
Length = 640
Score = 34.7 bits (76), Expect = 0.076
Identities = 19/72 (26%), Positives = 35/72 (48%)
Frame = -3
Query: 671 FQDLTKLMEKAKEMVSLSKNISTKIREKQGDISEDDTVRFKSYLMSLGIDDPVTRDAFRS 492
F D ++ E + ++ ++ KIRE GD+S + S+ +DDPV R+ +
Sbjct: 396 FNDAQQIFEMLNQAAEIAHKMNEKIREANGDMSRMPVLE-PPPTFSICLDDPVFRELYPL 454
Query: 491 DSEYYLGLAQQV 456
+ Y+ QQ+
Sbjct: 455 HLQNYVYPVQQL 466
>Z81030-1|CAB02703.1| 1204|Caenorhabditis elegans Hypothetical
protein C01G10.1 protein.
Length = 1204
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/88 (21%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Frame = -3
Query: 383 NRARGLELVSPEDLLNACKLLRTVDAPMSLRKFPSGACVLQLNSNRDEEIAKSTSDM--I 210
++ RG+ ++ + ++L ++A +++R+F VL++N D E+AK + + +
Sbjct: 546 SQLRGISKCLSQEFMQPLRVLEVIEAMITVRQFAGNKTVLKMNQYLD-ELAKVKNQLWKV 604
Query: 209 QENGYLTPEKLSQIANVSXLLARERLFT 126
++ L + + N+ L LFT
Sbjct: 605 EKQIKLITSQSNSSHNLVLKLKTPELFT 632
>Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical
protein M02G9.1 protein.
Length = 909
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 262 CKTQAPLGNFRSDMGASTVRSNLQAFNKSSGDT 360
C+ Q P SD A+ VR+ + + +KS+G+T
Sbjct: 62 CQPQCPRAEINSDCSATCVRACIPSCSKSTGNT 94
>Z70307-13|CAA94339.1| 354|Caenorhabditis elegans Hypothetical
protein C39E9.13 protein.
Length = 354
Score = 29.1 bits (62), Expect = 3.8
Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Frame = -3
Query: 350 EDLLNACKLLRTVDA-PMSLRKFPSGACVLQLNSNRDEEIAKSTSDMIQENGYLTPEK-L 177
E N CK++ + ++ + S ++ + + DE++ K +I+ +L PE L
Sbjct: 155 EKYANNCKIVLSCESLSRIIEPLQSRCIIINVPAPTDEDVTKVLRKVIERESFLLPENVL 214
Query: 176 SQIANVSXLLARERLFTTERL 114
+I S R + TE L
Sbjct: 215 QKIVEKSEGNLRRAILMTEAL 235
>AF098504-3|AAK73898.4| 2395|Caenorhabditis elegans Leucine-rich
repeats, ras-likedomain, kinase protein 1 protein.
Length = 2395
Score = 29.1 bits (62), Expect = 3.8
Identities = 20/78 (25%), Positives = 31/78 (39%)
Frame = -1
Query: 304 PCHSENSLVELVSYS*IATGMKRLLNLQVI*YKKMDTLHQRSYRKSQMYQXCWRERDYLL 125
P HSE ++ + A K NL + + +D QR Y + Y R + +L
Sbjct: 1007 PIHSETGVIRQAEWKFEAKRSKGDKNLGPVGFSVIDFGGQREYHSTHQYFLSKRSLNLVL 1066
Query: 124 RKDLAWRAVTSQLKAWLL 71
K +QL WL+
Sbjct: 1067 WKITDGDEALAQLDTWLV 1084
>AB297384-1|BAF48647.1| 2393|Caenorhabditis elegans PARK8-related
kinase protein.
Length = 2393
Score = 29.1 bits (62), Expect = 3.8
Identities = 20/78 (25%), Positives = 31/78 (39%)
Frame = -1
Query: 304 PCHSENSLVELVSYS*IATGMKRLLNLQVI*YKKMDTLHQRSYRKSQMYQXCWRERDYLL 125
P HSE ++ + A K NL + + +D QR Y + Y R + +L
Sbjct: 1005 PIHSETGVIRQAEWKFEAKRSKGDKNLGPVGFSVIDFGGQREYHSTHQYFLSKRSLNLVL 1064
Query: 124 RKDLAWRAVTSQLKAWLL 71
K +QL WL+
Sbjct: 1065 WKITDGDEALAQLDTWLV 1082
>AC024793-1|AAF60692.2| 649|Caenorhabditis elegans Atm (ataxia
telangectasia mutated)family protein 1 protein.
Length = 649
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -3
Query: 452 DMMVAVLLECGGIMSLADVWCRVNRARGLELVSPEDLLNACKL 324
D V+ CGG +SL +V C V R GL + ++A K+
Sbjct: 381 DTECGVIEFCGGTVSLKEVMCGVTREGGLHREFNSEEVSASKV 423
>AC006708-5|AAF60428.2| 254|Caenorhabditis elegans Hypothetical
protein Y110A7A.11 protein.
Length = 254
Score = 27.9 bits (59), Expect = 8.7
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = -3
Query: 707 QHRATDQSISVAFQDLTKLMEK-AKEMVSLSKNISTKIREKQGDISEDDTVRFKSYLMSL 531
+HRA D S F + E+ A + +++++ T + GD+ ++DT R + LM+
Sbjct: 143 KHRAQDTSEDQEFMKNELVEEELANSLATMARSFKTMM-SAAGDVIKEDTER--AILMAK 199
Query: 530 GIDDPVTRDAFRSD 489
+DD T +S+
Sbjct: 200 EVDDNKTALGIQSE 213
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,380,870
Number of Sequences: 27780
Number of extensions: 359966
Number of successful extensions: 982
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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