Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_P09
(679 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q3KAX2 Cluster: UspA; n=1; Pseudomonas fluorescens PfO-... 35 1.6
UniRef50_Q0RKI1 Cluster: Putative uncharacterized protein; n=1; ... 35 1.6
UniRef50_A4FNZ4 Cluster: Transposase Tn3 family protein; n=1; Sa... 35 1.6
UniRef50_Q7MAP1 Cluster: SENSOR KINASE OF TWO-COMPONENT REGULATO... 34 3.7
UniRef50_A3HJM9 Cluster: Putative uncharacterized protein; n=1; ... 33 4.8
UniRef50_Q1ZYM1 Cluster: Histidine kinase SHK278; n=1; Striga as... 33 6.4
UniRef50_A6LN06 Cluster: Putative uncharacterized protein; n=1; ... 33 8.4
UniRef50_A1ZK20 Cluster: Putative uncharacterized protein; n=1; ... 33 8.4
>UniRef50_Q3KAX2 Cluster: UspA; n=1; Pseudomonas fluorescens
PfO-1|Rep: UspA - Pseudomonas fluorescens (strain PfO-1)
Length = 307
Score = 35.1 bits (77), Expect = 1.6
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = -1
Query: 385 HVVEATPELGPKLAIKDTELMKLAKEIYERNMDEPTLETLPTHLRIL---GYVRP 230
HV+E + P L IKDT + + R +D L P HL ++ G+ RP
Sbjct: 100 HVLEYVQDFHPDLVIKDTHYVPALDRAFHRPLDWRLLRECPAHLHLVTSAGHARP 154
>UniRef50_Q0RKI1 Cluster: Putative uncharacterized protein; n=1;
Frankia alni ACN14a|Rep: Putative uncharacterized
protein - Frankia alni (strain ACN14a)
Length = 169
Score = 35.1 bits (77), Expect = 1.6
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -1
Query: 604 AKLEGNWMDPRGGTQDREWTDEEIENFIKTTMKSLRGQS 488
A + W + R Q+REW DE+ E F + T++ + +S
Sbjct: 76 AGMSEQWANQRAAEQEREWEDEQFERFHQETVRQVDAES 114
>UniRef50_A4FNZ4 Cluster: Transposase Tn3 family protein; n=1;
Saccharopolyspora erythraea NRRL 2338|Rep: Transposase
Tn3 family protein - Saccharopolyspora erythraea (strain
NRRL 23338)
Length = 401
Score = 35.1 bits (77), Expect = 1.6
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = -1
Query: 238 VRPCLYRTGLSDYQGGVARLAYELV----RDDRIPRYRAHNGCRPRWGLPPDGTRQPELD 71
V P +R + D +G + R+ Y L D + R R H RWG PP+ TR+PE
Sbjct: 318 VVPESWRPAVFDAEGRIERVPYGLCVLLSLRDMLSRRRVHIAGAGRWGRPPE-TREPEPV 376
Query: 70 GA 65
GA
Sbjct: 377 GA 378
>UniRef50_Q7MAP1 Cluster: SENSOR KINASE OF TWO-COMPONENT REGULATORY
SYSTEM ,; n=2; Wolinella succinogenes|Rep: SENSOR KINASE
OF TWO-COMPONENT REGULATORY SYSTEM , - Wolinella
succinogenes
Length = 390
Score = 33.9 bits (74), Expect = 3.7
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = -1
Query: 547 TDEEIENFIKTTMKSLRGQSTYFNDYCAHLSPEFKTRPFKPRDKKLKPCAL 395
T E+ +F + ++++L S D+ + + P+FK R F P + L+ AL
Sbjct: 199 TPEKFADFARGSIQTLHHLSNTIGDFYSFIKPDFKKREFSPYEALLESIAL 249
>UniRef50_A3HJM9 Cluster: Putative uncharacterized protein; n=1;
Pseudomonas putida GB-1|Rep: Putative uncharacterized
protein - Pseudomonas putida (strain GB-1)
Length = 162
Score = 33.5 bits (73), Expect = 4.8
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = -1
Query: 238 VRPCLYRTGLSDYQGGVARLAYELVRDDRIPRYRAHNGCRPRWGLPPD 95
+R LYR G DY+GG+ +LA+++ + + + H+ RW P +
Sbjct: 16 LRQALYRAG-RDYRGGITKLAFDMGLEVDTLQKKLHHNEERRWPTPDE 62
>UniRef50_Q1ZYM1 Cluster: Histidine kinase SHK278; n=1; Striga
asiatica|Rep: Histidine kinase SHK278 - Striga asiatica
(Asiatic witchweed) (Striga lutea)
Length = 1002
Score = 33.1 bits (72), Expect = 6.4
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = -1
Query: 379 VEATPELGPKLAIKDTELMKLAKEIYERNMDE 284
VE PE+GP L K +++ + +E++ERN++E
Sbjct: 748 VEVVPEVGPGLKKKPVQIVFVEEEMWERNVEE 779
>UniRef50_A6LN06 Cluster: Putative uncharacterized protein; n=1;
Thermosipho melanesiensis BI429|Rep: Putative
uncharacterized protein - Thermosipho melanesiensis
BI429
Length = 241
Score = 32.7 bits (71), Expect = 8.4
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = -1
Query: 661 EYRQHPIKKTKICRPEERWAKLEGNWMDPRGG-TQDREWTDEEIENFIKTTMKSLRGQST 485
EY Q IK K P++ K W + R TQ + WT E+I+ +I+T K L+G+
Sbjct: 146 EY-QDVIKAYKWSGPQD---KRTTKWCENRYKLTQKKPWTYEQIQKYIQTNPKKLKGKEI 201
Query: 484 YFNDYCAHLSPEFKTR 437
D+ L P + R
Sbjct: 202 R-ADHGTFLHPHIQCR 216
>UniRef50_A1ZK20 Cluster: Putative uncharacterized protein; n=1;
Microscilla marina ATCC 23134|Rep: Putative
uncharacterized protein - Microscilla marina ATCC 23134
Length = 1234
Score = 32.7 bits (71), Expect = 8.4
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = -1
Query: 541 EEIENFIKTTMKSLRGQSTYFNDYCAHLSPEFKTRPFKPRDKKL 410
E EN+ T +K G S+ FN C L F T PFK R+ L
Sbjct: 379 ELFENYFSTFIKDEEGFSSDFNIKCLGLIAFFYTLPFKDRETML 422
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 618,467,382
Number of Sequences: 1657284
Number of extensions: 11981963
Number of successful extensions: 34288
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 33154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34279
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52479343733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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