Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_P09
         (679 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_04_0044 + 16754638-16754676,16755472-16755598,16756325-167564...    30   2.0  
07_03_0632 - 20112297-20116562                                         29   2.6  
12_01_0891 - 8629832-8629999,8630158-8630346,8630664-8630972,863...    29   4.5  
10_02_0142 + 5785143-5785376,5785638-5785764,5785777-5786885           29   4.5  
08_02_0885 + 22268287-22268988                                         28   7.9  

>03_04_0044 +
           16754638-16754676,16755472-16755598,16756325-16756451,
           16756866-16757431,16757896-16758211,16758373-16758613,
           16758734-16758823,16759343-16759780,16759877-16760185,
           16760392-16760406
          Length = 755

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 1/124 (0%)
 Frame = -1

Query: 433 FKPRDKKLKPCALKGDHVVEATPELGPKLAIKDTELMKLAKEIYERNMDEPTLETLPTHL 254
           +KP+     P A   D+VV ++      +      +  L+K++ + N+ E     +P HL
Sbjct: 293 WKPKSVSPSP-ANHADNVVHSSA--ASSVDGNQAHMAGLSKKLSQTNVSEDEHVIIPAHL 349

Query: 253 RILGYVRPCLYRTGLSDYQGGVARLAYELVRDDRIPR-YRAHNGCRPRWGLPPDGTRQPE 77
           R+    R  L      +++  V   A+ L  D    R + AH+  R    +PP  T Q +
Sbjct: 350 RVPDSERTHLI---FGNFECDVESKAFTLAPDASTNREFNAHSSSRSTDDVPP--TDQTD 404

Query: 76  LDGA 65
           L G+
Sbjct: 405 LVGS 408


>07_03_0632 - 20112297-20116562
          Length = 1421

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
 Frame = -1

Query: 673  EYXDEYRQHPIKKTKICRPEERWAKLEGNWMD-PRGGTQDR-EWTDEEIENFIKTTMKSL 500
            E  +EYRQ   KKT  C   E W K E  W++       D+ EW + E E+++K     L
Sbjct: 1331 ETINEYRQ---KKT--CEFWEGWLKYEEEWVESATDHLNDKGEWLENEEEDWLKNNSDEL 1385


>12_01_0891 -
           8629832-8629999,8630158-8630346,8630664-8630972,
           8631023-8631229
          Length = 290

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -2

Query: 597 WKGIGWTREAALRIENG 547
           WK +GWTR A   IE+G
Sbjct: 59  WKAVGWTRFAVKEIEDG 75


>10_02_0142 + 5785143-5785376,5785638-5785764,5785777-5786885
          Length = 489

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -1

Query: 148 PRYRAHNGCRPRWGLPPDGTRQPELDGAPFD 56
           P+YR  N  +P W  P DG  +  +DG+ FD
Sbjct: 316 PKYRVLNNHQPCWERPKDGWMKLNVDGS-FD 345


>08_02_0885 + 22268287-22268988
          Length = 233

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -1

Query: 124 CRPRWGLPPDGTRQPELDGAPFDGERL 44
           C+ RW  PP+G  +  +DG+ FD + L
Sbjct: 74  CKMRWERPPEGWMKANVDGS-FDSQLL 99


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,137,481
Number of Sequences: 37544
Number of extensions: 347107
Number of successful extensions: 1075
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1075
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)