Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_P01
         (466 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   2.4  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   7.4  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    20   9.8  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +3

Query: 192 STTWDGSLRSASVTSGVSCKQSSRNKP 272
           S TW  SLR+A +   +S  +   + P
Sbjct: 270 SNTWQNSLRAADIQPTLSSIRHPESNP 296


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -2

Query: 186 ETSVLYVPYSSPCKKQSYTKEEWTKY 109
           E  +L V Y S    Q+Y +  W K+
Sbjct: 526 EGPLLVVEYCSRGDLQTYLRTAWDKF 551


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +2

Query: 350 HHGSCSKSHFIDSQIYDFN 406
           +  S  K+   D Q+Y FN
Sbjct: 58  YFASLEKNPLFDGQLYSFN 76


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,511
Number of Sequences: 336
Number of extensions: 2034
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10721526
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)