Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_P01
(466 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006684-9|AAF39958.1| 130|Caenorhabditis elegans Hypothetical ... 42 2e-04
Z54270-9|CAO82016.1| 787|Caenorhabditis elegans Hypothetical pr... 34 0.058
U29082-4|AAT92084.1| 279|Caenorhabditis elegans Troponin t prot... 34 0.058
U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t prot... 34 0.058
U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t prot... 34 0.058
Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical pr... 29 2.2
AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical ... 28 2.9
AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical... 28 2.9
AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical... 28 2.9
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 28 3.8
AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical... 28 3.8
Z22181-1|CAA80179.1| 710|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z54270-4|CAA91030.2| 1804|Caenorhabditis elegans Hypothetical pr... 27 6.6
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 27 8.8
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 27 8.8
AC084158-7|AAK68560.1| 929|Caenorhabditis elegans Hypothetical ... 27 8.8
>AC006684-9|AAF39958.1| 130|Caenorhabditis elegans Hypothetical
protein T02H6.11 protein.
Length = 130
Score = 41.9 bits (94), Expect = 2e-04
Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 5/63 (7%)
Frame = -1
Query: 322 SDSLSKWAY-NLSGFNKYGLLRDDCLHE-TPDVTEALRRL---PSHVVDERNFRIVRAIQ 158
+ +L K+A+ NL G +YGL D E P+VTEALRRL HV D+R R+ RA
Sbjct: 19 ASTLRKFAWSNLWGGREYGLQFHDTYFEPAPEVTEALRRLNLQEPHVFDQRKIRLSRAHT 78
Query: 157 LSM 149
L++
Sbjct: 79 LAL 81
>Z54270-9|CAO82016.1| 787|Caenorhabditis elegans Hypothetical
protein F11C1.5c protein.
Length = 787
Score = 33.9 bits (74), Expect = 0.058
Identities = 26/97 (26%), Positives = 42/97 (43%)
Frame = -2
Query: 321 VTASANGPTIFRDSINMVCYGMIACMKLLM*LKHSADFHPMLLTRETSVLYVPYSSPCKK 142
VTA+ NG D + MV +I + L+ + + L E L +
Sbjct: 460 VTAARNGDVCVLDGVEMVHSSVIMSLSQLIYHRRFDLPNGNRLVGEKEFLTIMERDGYDA 519
Query: 141 QSYTKEEWTKYEEDSLXLTPIVEQVEKERLEREQWEK 31
+Y K W K + S L +++Q+E ++ ERE W K
Sbjct: 520 DAYEKV-WNKVQAPSRKLASVIDQLEAKKKERE-WTK 554
>U29082-4|AAT92084.1| 279|Caenorhabditis elegans Troponin t protein
3, isoform c protein.
Length = 279
Score = 33.9 bits (74), Expect = 0.058
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = -2
Query: 147 KKQSYTKEEWTKYEEDSLXLTPIVEQVEKERLEREQWEKE 28
K Q Y + T+ E++ L + E+ EK +LEREQ EKE
Sbjct: 71 KLQDYEERRRTEREKEEEELKKLKEKQEKRKLEREQEEKE 110
>U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t protein
3, isoform b protein.
Length = 1178
Score = 33.9 bits (74), Expect = 0.058
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = -2
Query: 147 KKQSYTKEEWTKYEEDSLXLTPIVEQVEKERLEREQWEKE 28
K Q Y + T+ E++ L + E+ EK +LEREQ EKE
Sbjct: 905 KLQDYEERRRTEREKEEEELKKLKEKQEKRKLEREQEEKE 944
>U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t protein
3, isoform a protein.
Length = 350
Score = 33.9 bits (74), Expect = 0.058
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = -2
Query: 147 KKQSYTKEEWTKYEEDSLXLTPIVEQVEKERLEREQWEKE 28
K Q Y + T+ E++ L + E+ EK +LEREQ EKE
Sbjct: 71 KLQDYEERRRTEREKEEEELKKLKEKQEKRKLEREQEEKE 110
>Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical protein
T08G11.1b protein.
Length = 3185
Score = 28.7 bits (61), Expect = 2.2
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -2
Query: 162 YSSPCKKQSYTKEEWTKYEEDSLXLTPIVEQVEKERLEREQWE 34
+SS + S + + Y E PI+E VE E+ E E+W+
Sbjct: 1788 WSSAMRVSSGVSVQMSYYNESVSVWEPIIEPVENEKGEFERWK 1830
>Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical protein
T08G11.1a protein.
Length = 3212
Score = 28.7 bits (61), Expect = 2.2
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -2
Query: 162 YSSPCKKQSYTKEEWTKYEEDSLXLTPIVEQVEKERLEREQWE 34
+SS + S + + Y E PI+E VE E+ E E+W+
Sbjct: 1788 WSSAMRVSSGVSVQMSYYNESVSVWEPIIEPVENEKGEFERWK 1830
>AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical
protein W09B6.1a protein.
Length = 2054
Score = 28.3 bits (60), Expect = 2.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -2
Query: 132 TKEEWTKYEEDSLXLTPIVEQVEKERLEREQWEKEY 25
T E T++ E SL + P++ +EK+RL + Y
Sbjct: 1307 TTEVITEFSEASLGVYPVINTIEKKRLAARRVNSSY 1342
>AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical
protein C09E7.8b protein.
Length = 1080
Score = 28.3 bits (60), Expect = 2.9
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = -2
Query: 195 LTRETSVLYVPYSSPCKKQSYTKEEWTKYEEDSLXLTPIVEQVEKERLEREQWEKE 28
L+ + S L + S K + K+E T + +T + +Q+E+E+L +Q EKE
Sbjct: 700 LSGQISELEIQLKSELKTVQHLKKEQTISCNLTNEITKLKDQIEREKLCSKQLEKE 755
>AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical
protein C09E7.8a protein.
Length = 1114
Score = 28.3 bits (60), Expect = 2.9
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = -2
Query: 195 LTRETSVLYVPYSSPCKKQSYTKEEWTKYEEDSLXLTPIVEQVEKERLEREQWEKE 28
L+ + S L + S K + K+E T + +T + +Q+E+E+L +Q EKE
Sbjct: 734 LSGQISELEIQLKSELKTVQHLKKEQTISCNLTNEITKLKDQIEREKLCSKQLEKE 789
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 27.9 bits (59), Expect = 3.8
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = -2
Query: 147 KKQSYTKEEWTKYEEDSLXLTPIVEQVEKERLEREQWEKE 28
KKQ +EE + +++ Q EKERLERE EKE
Sbjct: 224 KKQQEEREEQERLQKEQQERDA---QEEKERLEREHAEKE 260
>AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical
protein Y54F10BM.2 protein.
Length = 1173
Score = 27.9 bits (59), Expect = 3.8
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = -2
Query: 147 KKQSYTKEEWTKYEEDSLXLTPIVEQVEKERLEREQWEKE 28
KKQ +EE + +++ Q EKERLERE EKE
Sbjct: 224 KKQQEEREEQERLQKEQQERDA---QEEKERLEREHAEKE 260
>Z22181-1|CAA80179.1| 710|Caenorhabditis elegans Hypothetical
protein ZK632.2 protein.
Length = 710
Score = 27.5 bits (58), Expect = 5.0
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -2
Query: 147 KKQSYTKEEWTKYEEDSLXLTPIVEQVEKERLEREQWEKE 28
+ Q T E Y+ED Q+EK+R +R+QW +E
Sbjct: 362 RMQRKTLEANDYYDEDDDLYLDRTGQLEKQREKRKQWAEE 401
>Z54270-4|CAA91030.2| 1804|Caenorhabditis elegans Hypothetical protein
F11C1.5a protein.
Length = 1804
Score = 27.1 bits (57), Expect = 6.6
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 120 WTKYEEDSLXLTPIVEQVEKERLEREQWEK 31
W K + S L +++Q+E ++ ERE W K
Sbjct: 1543 WNKVQAPSRKLASVIDQLEAKKKERE-WTK 1571
>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
protein.
Length = 1829
Score = 26.6 bits (56), Expect = 8.8
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -2
Query: 162 YSSPCKKQSYTKEEWTKYEEDSLXLTPIVEQVEKERLEREQWEK 31
Y S K SY +E EE+ T ++++ EKE + + WEK
Sbjct: 1161 YLSSFKVASYQTKETEGQEEEEEEETEVIKEDEKEP-DPDYWEK 1203
>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
Length = 1829
Score = 26.6 bits (56), Expect = 8.8
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -2
Query: 162 YSSPCKKQSYTKEEWTKYEEDSLXLTPIVEQVEKERLEREQWEK 31
Y S K SY +E EE+ T ++++ EKE + + WEK
Sbjct: 1161 YLSSFKVASYQTKETEGQEEEEEEETEVIKEDEKEP-DPDYWEK 1203
>AC084158-7|AAK68560.1| 929|Caenorhabditis elegans Hypothetical
protein Y69A2AR.16 protein.
Length = 929
Score = 26.6 bits (56), Expect = 8.8
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +1
Query: 118 PLFFSVGLFFAWRAVWHVQYGSFSRQQHGMEVC 216
P +G FAW ++ H + + SR+ E+C
Sbjct: 402 PFIIVMGELFAWASIEHDVFANASREMISPELC 434
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,879,587
Number of Sequences: 27780
Number of extensions: 192854
Number of successful extensions: 889
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 887
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 829055604
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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