Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_O02
         (719 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0401 - 8575886-8575935,8576518-8576617,8576798-8576959,857...    28   6.5  
03_05_0151 - 21284751-21284800,21285422-21285521,21285702-212858...    28   6.5  
03_02_0502 - 8934646-8934834,8934974-8935121,8935228-8935304,893...    28   6.5  

>09_02_0401 -
           8575886-8575935,8576518-8576617,8576798-8576959,
           8577106-8577253,8577436-8577458,8577615-8577685,
           8577792-8577878,8578039-8578470,8578574-8579009
          Length = 502

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -2

Query: 124 GNGAKHVQPDISS*WDINXLY-ICECAARAMKQV*KRRPGML 2
           GN    V PDI   +D N +  + ECAA A++Q    RP M+
Sbjct: 411 GNFDILVDPDIGDDYDENKMMRMMECAAAAVRQSAHLRPSMV 452


>03_05_0151 -
           21284751-21284800,21285422-21285521,21285702-21285863,
           21286010-21286157,21286286-21286362,21286519-21286589,
           21286696-21286782,21286943-21287374,21287478-21287913
          Length = 520

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -2

Query: 124 GNGAKHVQPDISS*WDINXLY-ICECAARAMKQV*KRRPGML 2
           GN    V PDI   +D N +  + ECAA A++Q    RP M+
Sbjct: 429 GNFDILVDPDIGDDYDENKMMRMMECAAAAVRQSAHLRPSMV 470


>03_02_0502 -
           8934646-8934834,8934974-8935121,8935228-8935304,
           8935427-8935497,8935594-8935680,8935852-8936316,
           8936406-8936880
          Length = 503

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -2

Query: 124 GNGAKHVQPDISS*WDINXLY-ICECAARAMKQV*KRRPGML 2
           GN    V PDI   +D N +  + ECAA A++Q    RP M+
Sbjct: 453 GNFDILVDPDIGDDYDENIMMRMIECAAAAVRQSAHLRPSMV 494


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,559,541
Number of Sequences: 37544
Number of extensions: 300738
Number of successful extensions: 435
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 435
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1874582652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)