Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_O02
         (719 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z98860-2|CAB11545.1|  337|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z81533-4|CAB04338.1|  280|Caenorhabditis elegans Hypothetical pr...    29   3.3  
AL021492-12|CAJ76949.1|  622|Caenorhabditis elegans Hypothetical...    29   3.3  
AL021492-11|CAA16378.1|  684|Caenorhabditis elegans Hypothetical...    29   3.3  

>Z98860-2|CAB11545.1|  337|Caenorhabditis elegans Hypothetical
           protein Y26G10.2 protein.
          Length = 337

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = -1

Query: 527 FCRRYVLYSPSSNVCV*STATTKFCNAYKIL*LDYTRQVPCFSNMFITIFYVVIFL 360
           F   YV+YS +S+ C+       FCN    +   Y +   C    F  I Y+ +FL
Sbjct: 101 FTSMYVVYSLASSSCL-----LLFCNRILSILNMYRKSKTCIRRFFELILYIFVFL 151


>Z81533-4|CAB04338.1|  280|Caenorhabditis elegans Hypothetical
           protein F36G9.7 protein.
          Length = 280

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = -3

Query: 405 FLQHVYYYFLCCDFLMKAQCY-NVFALIS*SVSECCKNK 292
           F    YY +LC  +     CY ++F  ++ S SE C +K
Sbjct: 238 FSSFPYYEYLCTHYWTNLTCYTSIFVFVNVSFSEKCVSK 276


>AL021492-12|CAJ76949.1|  622|Caenorhabditis elegans Hypothetical
           protein Y45F10D.3b protein.
          Length = 622

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +2

Query: 470 QYFKHKHYWKASIIRNADRRLFIDMPYIIYTTLADKNSGPN 592
           +Y   +H+W   +I+     LF+   Y+IY+ +A  N GPN
Sbjct: 5   RYLSRRHHW---VIQYCGLLLFL---YLIYSYVATSNDGPN 39


>AL021492-11|CAA16378.1|  684|Caenorhabditis elegans Hypothetical
           protein Y45F10D.3a protein.
          Length = 684

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +2

Query: 470 QYFKHKHYWKASIIRNADRRLFIDMPYIIYTTLADKNSGPN 592
           +Y   +H+W   +I+     LF+   Y+IY+ +A  N GPN
Sbjct: 67  RYLSRRHHW---VIQYCGLLLFL---YLIYSYVATSNDGPN 101


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,407,267
Number of Sequences: 27780
Number of extensions: 306153
Number of successful extensions: 504
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 504
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)