Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_N23
(626 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC064946-1|AAH64946.1| 318|Homo sapiens coenzyme Q9 homolog (S.... 138 2e-32
BC054340-1|AAH54340.2| 318|Homo sapiens coenzyme Q9 homolog (S.... 138 2e-32
AC004382-6|AAC24313.1| 318|Homo sapiens Unknown gene product pr... 138 2e-32
BC001478-1|AAH01478.2| 203|Homo sapiens COQ9 protein protein. 125 1e-28
AK130508-1|BAC85367.1| 121|Homo sapiens protein ( Homo sapiens ... 31 4.4
AB075856-1|BAB85562.1| 351|Homo sapiens KIAA1976 protein protein. 31 4.4
>BC064946-1|AAH64946.1| 318|Homo sapiens coenzyme Q9 homolog (S.
cerevisiae) protein.
Length = 318
Score = 138 bits (333), Expect = 2e-32
Identities = 70/179 (39%), Positives = 109/179 (60%), Gaps = 3/179 (1%)
Frame = -2
Query: 610 ILERALEFVSQTGWSVESLSAGAKSAGYPTITHGLFPNGGGDLIHYFNIKCNQQLAEQMK 431
IL ALEFV GW+ E+++ GA+S G + +F G +LI +F +CN +L ++
Sbjct: 103 ILTAALEFVPAHGWTAEAIAEGAQSLGLSSAAASMFGKDGSELILHFVTQCNTRLTRVLE 162
Query: 430 LWPQEDLKGGLKVPAK---FIENAIVTRLLMIKPYKSTWPKAMAIQTLPNNVPNGLATLL 260
Q+ ++ G K F+ +A+ TRL M+ PY WP+A++I LP+N+P+ L+ L
Sbjct: 163 E-EQKLVQLGQAEKRKTDQFLRDAVETRLRMLIPYIEHWPRALSILMLPHNIPSSLSLLT 221
Query: 259 SLVDDICYHSGDRSVDFNWYIRRVGLAGIYKAAELFYLTDNSQENNATRSFVSSRIRDA 83
S+VDD+ +++GD+S DFNWY RR LA IY EL + D+S + T F+ +R+ DA
Sbjct: 222 SMVDDMWHYAGDQSTDFNWYTRRAMLAAIYNTTELVMMQDSSPDFEDTWRFLENRVNDA 280
>BC054340-1|AAH54340.2| 318|Homo sapiens coenzyme Q9 homolog (S.
cerevisiae) protein.
Length = 318
Score = 138 bits (333), Expect = 2e-32
Identities = 70/179 (39%), Positives = 109/179 (60%), Gaps = 3/179 (1%)
Frame = -2
Query: 610 ILERALEFVSQTGWSVESLSAGAKSAGYPTITHGLFPNGGGDLIHYFNIKCNQQLAEQMK 431
IL ALEFV GW+ E+++ GA+S G + +F G +LI +F +CN +L ++
Sbjct: 103 ILTAALEFVPAHGWTAEAIAEGAQSLGLSSAAASMFGKDGSELILHFVTQCNTRLTRVLE 162
Query: 430 LWPQEDLKGGLKVPAK---FIENAIVTRLLMIKPYKSTWPKAMAIQTLPNNVPNGLATLL 260
Q+ ++ G K F+ +A+ TRL M+ PY WP+A++I LP+N+P+ L+ L
Sbjct: 163 E-EQKLVQLGQAEKRKTDQFLRDAVETRLRMLIPYIEHWPRALSILMLPHNIPSSLSLLT 221
Query: 259 SLVDDICYHSGDRSVDFNWYIRRVGLAGIYKAAELFYLTDNSQENNATRSFVSSRIRDA 83
S+VDD+ +++GD+S DFNWY RR LA IY EL + D+S + T F+ +R+ DA
Sbjct: 222 SMVDDMWHYAGDQSTDFNWYTRRAMLAAIYNTTELVMMQDSSPDFEDTWRFLENRVNDA 280
>AC004382-6|AAC24313.1| 318|Homo sapiens Unknown gene product
protein.
Length = 318
Score = 138 bits (333), Expect = 2e-32
Identities = 70/179 (39%), Positives = 109/179 (60%), Gaps = 3/179 (1%)
Frame = -2
Query: 610 ILERALEFVSQTGWSVESLSAGAKSAGYPTITHGLFPNGGGDLIHYFNIKCNQQLAEQMK 431
IL ALEFV GW+ E+++ GA+S G + +F G +LI +F +CN +L ++
Sbjct: 103 ILTAALEFVPAHGWTAEAIAEGAQSLGLSSAAASMFGKDGSELILHFVTQCNTRLTRVLE 162
Query: 430 LWPQEDLKGGLKVPAK---FIENAIVTRLLMIKPYKSTWPKAMAIQTLPNNVPNGLATLL 260
Q+ ++ G K F+ +A+ TRL M+ PY WP+A++I LP+N+P+ L+ L
Sbjct: 163 E-EQKLVQLGQAEKRKTDQFLRDAVETRLRMLIPYIEHWPRALSILMLPHNIPSSLSLLT 221
Query: 259 SLVDDICYHSGDRSVDFNWYIRRVGLAGIYKAAELFYLTDNSQENNATRSFVSSRIRDA 83
S+VDD+ +++GD+S DFNWY RR LA IY EL + D+S + T F+ +R+ DA
Sbjct: 222 SMVDDMWHYAGDQSTDFNWYTRRAMLAAIYNTTELVMMQDSSPDFEDTWRFLENRVNDA 280
>BC001478-1|AAH01478.2| 203|Homo sapiens COQ9 protein protein.
Length = 203
Score = 125 bits (302), Expect = 1e-28
Identities = 62/166 (37%), Positives = 101/166 (60%), Gaps = 3/166 (1%)
Frame = -2
Query: 571 WSVESLSAGAKSAGYPTITHGLFPNGGGDLIHYFNIKCNQQLAEQMKLWPQEDLKGGLKV 392
W+ E+++ GA+S G + +F G +LI +F +CN +L ++ Q+ ++ G
Sbjct: 1 WTAEAIAEGAQSLGLSSAAASMFGKDGSELILHFVTQCNTRLTRVLEE-EQKLVQLGQAE 59
Query: 391 PAK---FIENAIVTRLLMIKPYKSTWPKAMAIQTLPNNVPNGLATLLSLVDDICYHSGDR 221
K F+ +A+ TRL M+ PY WP+A++I LP+N+P+ L+ L S+VDD+ +++GD+
Sbjct: 60 KRKTDQFLRDAVETRLRMLIPYIEHWPRALSILMLPHNIPSSLSLLTSMVDDMWHYAGDQ 119
Query: 220 SVDFNWYIRRVGLAGIYKAAELFYLTDNSQENNATRSFVSSRIRDA 83
S DFNWY RR LA IY EL + D+S + T F+ +R+ DA
Sbjct: 120 STDFNWYTRRAMLAAIYNTTELVMMQDSSPDFEDTWRFLENRVNDA 165
>AK130508-1|BAC85367.1| 121|Homo sapiens protein ( Homo sapiens
cDNA FLJ26998 fis, clone SLV04689. ).
Length = 121
Score = 30.7 bits (66), Expect = 4.4
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 323 PCTLVWFYHE*PCYYSIFNKLCW 391
PCT+ + Y C SI N LCW
Sbjct: 12 PCTITYCYTANDCTLSIINNLCW 34
>AB075856-1|BAB85562.1| 351|Homo sapiens KIAA1976 protein protein.
Length = 351
Score = 30.7 bits (66), Expect = 4.4
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -1
Query: 575 WMVSRVFECRCKISWLSHHYSWPLSKWRW 489
W V R ++C C+ L S P +WRW
Sbjct: 316 WEVPRKYQCSCRPHALGESGSSPSRRWRW 344
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,607,409
Number of Sequences: 237096
Number of extensions: 1891577
Number of successful extensions: 7066
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7056
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -