Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_N23
(626 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54342-17|CAA91155.2| 365|Caenorhabditis elegans Hypothetical p... 29 2.7
Z49913-8|CAA90148.2| 365|Caenorhabditis elegans Hypothetical pr... 29 2.7
AL032627-7|CAD56256.1| 306|Caenorhabditis elegans Hypothetical ... 29 3.6
AL032627-6|CAD56255.1| 331|Caenorhabditis elegans Hypothetical ... 29 3.6
AL032627-5|CAD45607.2| 314|Caenorhabditis elegans Hypothetical ... 29 3.6
AL032627-4|CAB54382.2| 327|Caenorhabditis elegans Hypothetical ... 29 3.6
AL032627-3|CAB54381.2| 325|Caenorhabditis elegans Hypothetical ... 29 3.6
AB081596-1|BAC19843.1| 325|Caenorhabditis elegans cyclic AMP-re... 29 3.6
AB081595-1|BAC19842.1| 306|Caenorhabditis elegans cyclic AMP-re... 29 3.6
Z73899-8|CAA98079.2| 669|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr... 27 8.3
>Z54342-17|CAA91155.2| 365|Caenorhabditis elegans Hypothetical
protein C08H9.8 protein.
Length = 365
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = -2
Query: 490 GDLIHYFNIKCNQQLAEQMKLWPQEDLKGGLKVPAKFIENAIVTRLLMIKPYK 332
GDL++Y + A+Q +W ED G L +K IEN++ T L+ Y+
Sbjct: 152 GDLLNYLRQNRERFQAKQ-PIWSNEDNSGYLIPKSKPIENSLYTSGLLSFAYQ 203
>Z49913-8|CAA90148.2| 365|Caenorhabditis elegans Hypothetical
protein C08H9.8 protein.
Length = 365
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = -2
Query: 490 GDLIHYFNIKCNQQLAEQMKLWPQEDLKGGLKVPAKFIENAIVTRLLMIKPYK 332
GDL++Y + A+Q +W ED G L +K IEN++ T L+ Y+
Sbjct: 152 GDLLNYLRQNRERFQAKQ-PIWSNEDNSGYLIPKSKPIENSLYTSGLLSFAYQ 203
>AL032627-7|CAD56256.1| 306|Caenorhabditis elegans Hypothetical
protein Y41C4A.4e protein.
Length = 306
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -2
Query: 577 TGWSVESLSAGAKSAGYPTITHGLFPNGGGDL 482
T W LS G S+ PT+T G GGG L
Sbjct: 207 TDWQSPMLSGGYSSSPSPTMTGGSMRMGGGPL 238
>AL032627-6|CAD56255.1| 331|Caenorhabditis elegans Hypothetical
protein Y41C4A.4d protein.
Length = 331
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -2
Query: 577 TGWSVESLSAGAKSAGYPTITHGLFPNGGGDL 482
T W LS G S+ PT+T G GGG L
Sbjct: 232 TDWQSPMLSGGYSSSPSPTMTGGSMRMGGGPL 263
>AL032627-5|CAD45607.2| 314|Caenorhabditis elegans Hypothetical
protein Y41C4A.4c protein.
Length = 314
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -2
Query: 577 TGWSVESLSAGAKSAGYPTITHGLFPNGGGDL 482
T W LS G S+ PT+T G GGG L
Sbjct: 215 TDWQSPMLSGGYSSSPSPTMTGGSMRMGGGPL 246
>AL032627-4|CAB54382.2| 327|Caenorhabditis elegans Hypothetical
protein Y41C4A.4b protein.
Length = 327
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -2
Query: 577 TGWSVESLSAGAKSAGYPTITHGLFPNGGGDL 482
T W LS G S+ PT+T G GGG L
Sbjct: 228 TDWQSPMLSGGYSSSPSPTMTGGSMRMGGGPL 259
>AL032627-3|CAB54381.2| 325|Caenorhabditis elegans Hypothetical
protein Y41C4A.4a protein.
Length = 325
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -2
Query: 577 TGWSVESLSAGAKSAGYPTITHGLFPNGGGDL 482
T W LS G S+ PT+T G GGG L
Sbjct: 226 TDWQSPMLSGGYSSSPSPTMTGGSMRMGGGPL 257
>AB081596-1|BAC19843.1| 325|Caenorhabditis elegans cyclic
AMP-response element bindingprotein 1 gamma 2 protein.
Length = 325
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -2
Query: 577 TGWSVESLSAGAKSAGYPTITHGLFPNGGGDL 482
T W LS G S+ PT+T G GGG L
Sbjct: 226 TDWQSPMLSGGYSSSPSPTMTGGSMRMGGGPL 257
>AB081595-1|BAC19842.1| 306|Caenorhabditis elegans cyclic
AMP-response element bindingprotein 1 beta protein.
Length = 306
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -2
Query: 577 TGWSVESLSAGAKSAGYPTITHGLFPNGGGDL 482
T W LS G S+ PT+T G GGG L
Sbjct: 207 TDWQSPMLSGGYSSSPSPTMTGGSMRMGGGPL 238
>Z73899-8|CAA98079.2| 669|Caenorhabditis elegans Hypothetical
protein ZK829.10 protein.
Length = 669
Score = 27.9 bits (59), Expect = 6.3
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1
Query: 527 SHHYSWPLSKWRW 489
S Y+WP+ KWRW
Sbjct: 481 SRAYTWPIWKWRW 493
>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical
protein F07A11.4 protein.
Length = 1095
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 158 FSSFVYSSQTYTANIPVEINTT 223
F++F YS +YT NI +NTT
Sbjct: 33 FNTFKYSPSSYTPNISRNLNTT 54
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,765,165
Number of Sequences: 27780
Number of extensions: 280296
Number of successful extensions: 626
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 614
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 626
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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