Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_N22
(610 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 44 1e-04
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 44 1e-04
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 40 0.001
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 40 0.001
U50301-8|AAB37049.1| 339|Caenorhabditis elegans Serpin protein ... 39 0.002
Z75543-10|CAA99875.2| 279|Caenorhabditis elegans Hypothetical p... 31 0.64
AY728059-1|AAU43720.1| 279|Caenorhabditis elegans cadmium-induc... 31 0.64
Z81077-3|CAB03067.1| 527|Caenorhabditis elegans Hypothetical pr... 28 6.0
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 43.6 bits (98), Expect = 1e-04
Identities = 30/104 (28%), Positives = 50/104 (48%)
Frame = -2
Query: 606 TDGKYSMLVILPHPRTKIADMYKNFADVNLKDVFKQLQKDVDDFGLEDVDVKLPRFQIST 427
+D +Y V LP R + + K + D+ K ++ ++ +LP+F I
Sbjct: 215 SDQRYQFSVFLPKLRNSLKEALKKLNEKRFNDLLKTKKRTF-------MNTQLPKFTIEK 267
Query: 426 NVVLNKPLNDMGVYDIFQPDLANFQRITKENIFVSAIVHKADIE 295
++ L L +G+ DIF D A+ + EN+ +S VHKA IE
Sbjct: 268 DLNLKSHLQTLGITDIFS-DSADLSGLA-ENLKISEGVHKAIIE 309
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 43.6 bits (98), Expect = 1e-04
Identities = 30/104 (28%), Positives = 50/104 (48%)
Frame = -2
Query: 606 TDGKYSMLVILPHPRTKIADMYKNFADVNLKDVFKQLQKDVDDFGLEDVDVKLPRFQIST 427
+D +Y V LP R + + K + D+ K ++ ++ +LP+F I
Sbjct: 215 SDQRYQFSVFLPKLRNSLKEALKKLNEKRFNDLLKTKKRTF-------MNTQLPKFTIEK 267
Query: 426 NVVLNKPLNDMGVYDIFQPDLANFQRITKENIFVSAIVHKADIE 295
++ L L +G+ DIF D A+ + EN+ +S VHKA IE
Sbjct: 268 DLNLKSHLQTLGITDIFS-DSADLSGLA-ENLKISEGVHKAIIE 309
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 40.3 bits (90), Expect = 0.001
Identities = 26/103 (25%), Positives = 53/103 (51%)
Frame = -2
Query: 603 DGKYSMLVILPHPRTKIADMYKNFADVNLKDVFKQLQKDVDDFGLEDVDVKLPRFQISTN 424
D K+++ + LP R + D + ++++ L+ V V++P+F+I
Sbjct: 214 DPKFTLAIFLPKQRFGLVDALEKINGEYIQNLLNDLKSSY-------VSVQIPKFKIEKE 266
Query: 423 VVLNKPLNDMGVYDIFQPDLANFQRITKENIFVSAIVHKADIE 295
+ L + L +G+ +IF + A+ I + +F+S+ +HKA IE
Sbjct: 267 LDLKETLEAIGIKEIF-AEGADLSGIA-DKVFISSGIHKAIIE 307
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 40.3 bits (90), Expect = 0.001
Identities = 26/103 (25%), Positives = 53/103 (51%)
Frame = -2
Query: 603 DGKYSMLVILPHPRTKIADMYKNFADVNLKDVFKQLQKDVDDFGLEDVDVKLPRFQISTN 424
D K+++ + LP R + D + ++++ L+ V V++P+F+I
Sbjct: 214 DPKFTLAIFLPKQRFGLVDALEKINGEYIQNLLNDLKSSY-------VSVQIPKFKIEKE 266
Query: 423 VVLNKPLNDMGVYDIFQPDLANFQRITKENIFVSAIVHKADIE 295
+ L + L +G+ +IF + A+ I + +F+S+ +HKA IE
Sbjct: 267 LDLKETLEAIGIKEIF-AEGADLSGIA-DKVFISSGIHKAIIE 307
>U50301-8|AAB37049.1| 339|Caenorhabditis elegans Serpin protein 8
protein.
Length = 339
Score = 39.1 bits (87), Expect = 0.002
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Frame = -2
Query: 606 TDGKYSMLVILPHPRTKIADMYKNFADVNLKDVFKQLQKDVDDFGLEDVDVKLPRFQIST 427
TD + M + LP + +A+ K +++ L+ +V ++ V+V++P ++ T
Sbjct: 219 TDSSFEMTIFLPKEQFGLAEALKTLGTSTIQE----LKSNVSNYL---VNVQIPIWRNET 271
Query: 426 NVVLNKPLNDMGVYDIFQPD--LANFQRITKENIFVSAIVHKADIE 295
+ LN L +G+ I + NF EN+ +S +HKA IE
Sbjct: 272 EIDLNSTLQAIGITKILNESAYIGNFA----ENVHISEFIHKAIIE 313
>Z75543-10|CAA99875.2| 279|Caenorhabditis elegans Hypothetical
protein K01D12.14 protein.
Length = 279
Score = 31.1 bits (67), Expect = 0.64
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +2
Query: 302 SALCTMADTNIFSFVIRWKLAKSGW 376
+ALC +AD ++ S +I++K A+ W
Sbjct: 133 TALCRLADNHLLSIIIKYKAAEDAW 157
>AY728059-1|AAU43720.1| 279|Caenorhabditis elegans
cadmium-inducible lysosomal proteinCDR-5 protein.
Length = 279
Score = 31.1 bits (67), Expect = 0.64
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +2
Query: 302 SALCTMADTNIFSFVIRWKLAKSGW 376
+ALC +AD ++ S +I++K A+ W
Sbjct: 133 TALCRLADNHLLSIIIKYKAAEDAW 157
>Z81077-3|CAB03067.1| 527|Caenorhabditis elegans Hypothetical
protein F36A2.2 protein.
Length = 527
Score = 27.9 bits (59), Expect = 6.0
Identities = 16/61 (26%), Positives = 24/61 (39%)
Frame = +1
Query: 169 SGGRFLHYEVNKGPICVECGRRNPIGKSXXXXXXXXCSRFRDLYISFMHYGRHEYILLCD 348
SG R L + K P C CG+ P G+ C R++ + + H Y+
Sbjct: 463 SGARILEAKKIKFPPCARCGQ--PAGQGCANSKCKKCCRYQSKH-ELLDCKPHRYLFASQ 519
Query: 349 P 351
P
Sbjct: 520 P 520
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,775,791
Number of Sequences: 27780
Number of extensions: 225699
Number of successful extensions: 517
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 515
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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