Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_N17
         (733 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0501 + 4345522-4345720,4346598-4347167,4347294-4347366,435...    28   8.8  

>08_01_0501 +
           4345522-4345720,4346598-4347167,4347294-4347366,
           4351133-4353092,4353465-4353840,4353932-4354326,
           4354597-4354765,4355444-4355518,4357699-4357826,
           4357988-4358213,4358290-4358417,4358505-4358768
          Length = 1520

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 4/74 (5%)
 Frame = +1

Query: 94  FKPRSASARHXVTKHVXTXKNASLSQSKRISPI-FVGKQFPHNASSLLANSYAVF--IPX 264
           +K +   ARH ++  +   K   +  SKR     FVG Q  H  S +     A++  +  
Sbjct: 162 YKLKKMKARHEISNEIEELKTRVIEASKRHKRYNFVGLQSSHGTSGIDPRLRALYVEVDE 221

Query: 265 TAAINSPYSFV-EW 303
              I  P   V EW
Sbjct: 222 LVGIKGPKEHVMEW 235


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,990,995
Number of Sequences: 37544
Number of extensions: 275001
Number of successful extensions: 500
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 500
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1921741964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)