Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_N16
         (733 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            25   2.4  
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    23   9.7  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    23   9.7  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    23   9.7  
CR954257-5|CAJ14156.1|  227|Anopheles gambiae predicted protein ...    23   9.7  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   9.7  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   9.7  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +2

Query: 479  IDSSISHWCYPLLWFLNHHVSFKKG 553
            + S +S+   PL WFLN+H +  +G
Sbjct: 3072 LGSFLSYLRIPLDWFLNYHENTPEG 3096


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
 Frame = -3

Query: 332 LNNDR*T--RVWWPEVYGESNGQ 270
           L ND+ T  +VW P+ YG   GQ
Sbjct: 42  LTNDKATLIQVWKPKSYGSVKGQ 64


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
 Frame = -3

Query: 332 LNNDR*T--RVWWPEVYGESNGQ 270
           L ND+ T  +VW P+ YG   GQ
Sbjct: 42  LTNDKATLIQVWKPKSYGSVKGQ 64


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
 Frame = -3

Query: 332 LNNDR*T--RVWWPEVYGESNGQ 270
           L ND+ T  +VW P+ YG   GQ
Sbjct: 20  LTNDKATLIQVWKPKSYGSVKGQ 42


>CR954257-5|CAJ14156.1|  227|Anopheles gambiae predicted protein
           protein.
          Length = 227

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 140 ISRPSCYYKITTKYCTGCNK 81
           ++RPS   K T   CTG N+
Sbjct: 114 LARPSMIVKCTRNVCTGRNE 133


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
 Frame = -1

Query: 166  IVSGTAIIGSADQAATIKLLRSTVQD-AINK*YYKRQHHKIMHSKGLKSSKF 14
            I+S   +     Q  T  L  S  +  AIN  Y K Q H+I +   +K  +F
Sbjct: 1992 ILSDVLLSNHQSQIITSALYSSGNESLAINYEYQKNQIHEIHYPVSVKGKRF 2043


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
 Frame = -1

Query: 166  IVSGTAIIGSADQAATIKLLRSTVQD-AINK*YYKRQHHKIMHSKGLKSSKF 14
            I+S   +     Q  T  L  S  +  AIN  Y K Q H+I +   +K  +F
Sbjct: 1993 ILSDVLLSNHQSQIITSALYSSGNESLAINYEYQKNQIHEIHYPVSVKGKRF 2044


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 747,056
Number of Sequences: 2352
Number of extensions: 15540
Number of successful extensions: 23
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)