Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_N14
         (632 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               24   1.4  
DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    22   5.7  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    22   5.7  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    22   5.7  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    22   5.7  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    22   5.7  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    22   5.7  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    22   5.7  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    21   7.5  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    21   9.9  

>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 138 NFHSGFIVVTSFIYIYF 188
           N+H  FI+V + I++YF
Sbjct: 4   NYHFFFILVITLIFLYF 20


>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -1

Query: 413 LSNCFKFSYVP*NNKNFNEIHQLIDYH 333
           LSN +K+S     N N+N  ++ + Y+
Sbjct: 85  LSNNYKYSNYNNYNNNYNTNYKKLQYY 111


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -1

Query: 413 LSNCFKFSYVP*NNKNFNEIHQLIDYH 333
           LSN +K+S     N N+N  ++ + Y+
Sbjct: 85  LSNNYKYSNYNNYNNNYNTNYKKLQYY 111


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -1

Query: 413 LSNCFKFSYVP*NNKNFNEIHQLIDYH 333
           LSN +K+S     N N+N  ++ + Y+
Sbjct: 85  LSNNYKYSNYNNYNNNYNTNYKKLQYY 111


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -1

Query: 413 LSNCFKFSYVP*NNKNFNEIHQLIDYH 333
           LSN +K+S     N N+N  ++ + Y+
Sbjct: 85  LSNNYKYSNYNNYNNNYNTNYKKLQYY 111


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -1

Query: 413 LSNCFKFSYVP*NNKNFNEIHQLIDYH 333
           LSN +K+S     N N+N  ++ + Y+
Sbjct: 85  LSNNYKYSNYNNYNNNYNTNYKKLQYY 111


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -1

Query: 413 LSNCFKFSYVP*NNKNFNEIHQLIDYH 333
           LSN +K+S     N N+N  ++ + Y+
Sbjct: 85  LSNNYKYSNYNNYNNNYNTNYKKLQYY 111


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -1

Query: 413 LSNCFKFSYVP*NNKNFNEIHQLIDYH 333
           LSN +K+S     N N+N  ++ + Y+
Sbjct: 85  LSNNYKYSNYNNYNNNYNTNYKKLQYY 111


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/18 (50%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
 Frame = +3

Query: 138 NFHS-GFIVVTSFIYIYF 188
           NF S  FI++  FI++YF
Sbjct: 10  NFPSTSFILINYFIFLYF 27


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 416 VDLGSRIFFNLDFLILH 466
           +D  SR FF   FLIL+
Sbjct: 359 IDKVSRFFFPFSFLILN 375


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,036
Number of Sequences: 438
Number of extensions: 2781
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)