Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_N13
         (527 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0315 - 2468267-2468293,2469021-2469070,2469159-2469234,246...    27   7.1  
11_01_0059 - 444991-446908,447595-448218,448431-448861,450974-45...    27   9.3  

>05_01_0315 -
           2468267-2468293,2469021-2469070,2469159-2469234,
           2469498-2469575,2469967-2470048,2470146-2470238,
           2470564-2470673,2470831-2470893,2471293-2471344,
           2471421-2471545,2472681-2472794,2472917-2472961,
           2473278-2473337,2474725-2474778,2474944-2474992,
           2475071-2475252,2475349-2475404,2475491-2475584
          Length = 469

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 401 IHTLFEQECRECYHDK*CYYHIQ 333
           +H    Q C+ CY  K CY+ +Q
Sbjct: 143 VHNKHMQRCQVCYSGKTCYFALQ 165


>11_01_0059 - 444991-446908,447595-448218,448431-448861,450974-452293
          Length = 1430

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -1

Query: 404  CIHTLFEQECRECYHDK*CYYHIQRRGFLCPCMVDV 297
            C HT   Q+ R  +H+    YHI  R     CMVD+
Sbjct: 1169 CTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDL 1204


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,123,531
Number of Sequences: 37544
Number of extensions: 221180
Number of successful extensions: 418
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 418
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1166441080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)