Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_N12
(738 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090818-1|BAC57911.1| 285|Anopheles gambiae gag-like protein p... 48 2e-07
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos... 42 2e-05
AB090821-1|BAC57917.1| 353|Anopheles gambiae gag-like protein p... 42 3e-05
AB090816-1|BAC57907.1| 455|Anopheles gambiae gag-like protein p... 42 3e-05
AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein p... 41 5e-05
AB090824-1|BAC57923.1| 298|Anopheles gambiae gag-like protein p... 40 8e-05
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 40 8e-05
AB090817-1|BAC57909.1| 344|Anopheles gambiae gag-like protein p... 39 1e-04
M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein. 39 2e-04
AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein p... 38 3e-04
AB090820-1|BAC57915.1| 527|Anopheles gambiae gag-like protein p... 37 7e-04
M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles ... 36 0.001
AB090819-1|BAC57913.1| 400|Anopheles gambiae gag-like protein p... 35 0.003
AB090822-1|BAC57919.1| 468|Anopheles gambiae gag-like protein p... 32 0.021
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 28 0.35
DQ974161-1|ABJ52801.1| 409|Anopheles gambiae serpin 2 protein. 26 1.4
AF203339-1|AAF19834.1| 156|Anopheles gambiae immune-responsive ... 26 1.4
AB090815-1|BAC57905.1| 492|Anopheles gambiae gag-like protein p... 25 1.8
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc... 25 2.4
AJ250916-1|CAB91840.1| 435|Anopheles gambiae serine protease pr... 24 4.3
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 24 5.6
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 23 7.4
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 23 9.8
AJ438610-11|CAD27483.1| 765|Anopheles gambiae hypothetical prot... 23 9.8
>AB090818-1|BAC57911.1| 285|Anopheles gambiae gag-like protein
protein.
Length = 285
Score = 48.4 bits (110), Expect = 2e-07
Identities = 36/135 (26%), Positives = 57/135 (42%), Gaps = 10/135 (7%)
Frame = +2
Query: 182 VPTDLSNEDIYKNISS--DAEIISIK-RFMKRNADKKLMPMSSVAITFSTTTLPRYVYLN 352
+P D S+E+I +S+ EI S + +K + + AIT + L R +
Sbjct: 139 IPPDTSSEEISSEMSAALGVEIFSDQITTVKTHYGTLVAFFDCPAITVTDQALARQYTVG 198
Query: 353 LFRCEVQTYISPLIQCFKCFKFNHSAKVCRSK---QMCSYCAGDHHYKECVSDILVCINC 523
+C + QC++C+++ H+A C K C CA D H C + C+ C
Sbjct: 199 FSKCCRLRLLERRRQCYRCYEYGHTAARCHGKDRSSKCHRCAEDKHEGPCTRE-RKCLGC 257
Query: 524 GG----GHLAVSRDC 556
G GH R C
Sbjct: 258 EGPDAIGHSLGQRSC 272
>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
polyprotein protein.
Length = 1726
Score = 41.9 bits (94), Expect = 2e-05
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 398 CFKCFKFNHSAKVCRSKQMCSYCAGDHHYKEC 493
CF C + HSA+ CRS +C C HH K C
Sbjct: 377 CFNCLRKGHSARECRSTYVCQQCKRKHHSKLC 408
>AB090821-1|BAC57917.1| 353|Anopheles gambiae gag-like protein
protein.
Length = 353
Score = 41.5 bits (93), Expect = 3e-05
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = +2
Query: 392 IQCFKCFKFNHSAKVCRSK---QMCSYC-AGDHHYKECVSDILVCINCGGGHLAVSRDC 556
++CF+C + H+ C + +C +C A DH C SD CI CGG H + C
Sbjct: 289 VRCFRCLERGHTTADCAGEDRSSLCLHCGAADHRAASCTSD-PKCIVCGGPHRIAAPMC 346
>AB090816-1|BAC57907.1| 455|Anopheles gambiae gag-like protein
protein.
Length = 455
Score = 41.5 bits (93), Expect = 3e-05
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Frame = +2
Query: 395 QCFKCFKFNHSAKVCRS----KQMCSYCAGDHHY-KECVSDILVCINCGGGH 535
+C++C + H A+ C+S +Q C C D HY K C S+I C C G H
Sbjct: 389 RCYRCLERGHLARDCQSPVDRQQACIRCGADGHYAKSCTSEI-KCAACNGPH 439
>AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein
protein.
Length = 541
Score = 40.7 bits (91), Expect = 5e-05
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Frame = +2
Query: 395 QCFKCFKFNHSAKVCRS----KQMCSYCAGDHHYKECVSDILVCINCGGGHLAVSRDC 556
+C++C + H A CRS +Q+C C + H S + C CGG H C
Sbjct: 476 RCYRCLERGHLAHACRSSTDRQQLCIRCGSEGHKARDCSSYVKCAACGGPHRIGHMSC 533
>AB090824-1|BAC57923.1| 298|Anopheles gambiae gag-like protein
protein.
Length = 298
Score = 39.9 bits (89), Expect = 8e-05
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Frame = +2
Query: 395 QCFKCFKFNHSAKVCRSKQMCSYC----AGDHHYKECVSDILVCINCGGGHLAVSRDC 556
+CF+C + H + C+ S C A +H C +D+ C+ CGG H + C
Sbjct: 235 RCFRCLERGHMVRECQGTNRSSLCIRCGAANHKAVNCTNDVK-CLLCGGPHRIAAASC 291
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 39.9 bits (89), Expect = 8e-05
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Frame = +2
Query: 392 IQCFKCFKFNHSAKVCRS----KQMCSYCAGDHHYKECVSDILVCINCGGGHLAVSRDC 556
++C++C + H A CRS + MC C H + + C+ CGG H DC
Sbjct: 660 VRCYRCLELGHWAHDCRSPDDRQNMCIRCGVVGHMAKVCTSQPKCLKCGGPHTIGHPDC 718
>AB090817-1|BAC57909.1| 344|Anopheles gambiae gag-like protein
protein.
Length = 344
Score = 39.1 bits (87), Expect = 1e-04
Identities = 27/139 (19%), Positives = 59/139 (42%), Gaps = 3/139 (2%)
Frame = +2
Query: 119 KHKFRAFIPAHLVEKVGVIKFVPTDLSNEDIYKNISSDAEIISIKRFMKRNADKKLMPMS 298
K R P+ ++E + + + + E + ++ + EI IK R A + ++
Sbjct: 185 KASVRTLAPSKMIEIMHLDEITTPEEVAESVKAQLNIEIEIDRIKMKKGRAAGTQWARIN 244
Query: 299 SVAITFSTTTLPRYVYLNLFRCEVQTYISPLIQCFKCFKFNHSAKVCRS---KQMCSYCA 469
F + + + C ++ + +C+KC+K H++ CR +C C
Sbjct: 245 VSLPDFQSFLNLGKLKVGWSICHIREVMEEQ-KCYKCWKVGHTSYHCREPDRSNLCWKCG 303
Query: 470 GDHHYKECVSDILVCINCG 526
H K+ ++ + C++CG
Sbjct: 304 LSGHKKQACTNSVKCLDCG 322
>M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein.
Length = 613
Score = 38.7 bits (86), Expect = 2e-04
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = +2
Query: 392 IQCFKCFKFNHSAKVCRS----KQMCSYCAGDHHYKECVSDILVCINCGGGHLAVSRDC 556
++C++C + H+A+ CRS + +C C + H + + C C G H+ R C
Sbjct: 549 LRCYRCLEHGHNARDCRSPVDRQNVCIRCGQEGHKAGTCMEEIRCGKCDGPHVIGDRTC 607
>AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein
protein.
Length = 429
Score = 37.9 bits (84), Expect = 3e-04
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Frame = +2
Query: 395 QCFKCFKFNHSAKVCRS----KQMCSYCAGDHHY-KECVSDILVCINCGGGHLAVSRDC 556
+C++C + H A+ CRS ++ C C + H K+C +++ C C G H DC
Sbjct: 363 RCYRCLERGHIARECRSPVDRQKACIRCGAEGHLAKDCNAEV-KCAVCSGPHRVGHSDC 420
>AB090820-1|BAC57915.1| 527|Anopheles gambiae gag-like protein
protein.
Length = 527
Score = 36.7 bits (81), Expect = 7e-04
Identities = 25/137 (18%), Positives = 54/137 (39%), Gaps = 7/137 (5%)
Frame = +2
Query: 167 GVIKFVPTDLSNEDIYKNISSDAEIISIKRFMKRNADKKL---MPMSSVAITFSTTTLPR 337
G+ + + + + + + + ++ + +R+ K+ +P + +
Sbjct: 388 GIDNMIDEEAIKKALMTTLGKQSLVATVNLWERRDMTKRARVRLPRAEAELVKDRRLELG 447
Query: 338 YVYLNLFRCEVQTYISPLIQCFKCFKFNHSAKVCRSKQMCSYC--AGDHHYKE--CVSDI 505
Y Y ++ E L +CF+C + H A C + C GD +K C +++
Sbjct: 448 YTYCSVH--EAPKVSGQLTRCFRCLERGHIAATCTGEDRSKRCLRCGDQTHKASGCTNEV 505
Query: 506 LVCINCGGGHLAVSRDC 556
C+ CGG H + C
Sbjct: 506 K-CMLCGGAHRIGAAAC 521
>M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 574
Score = 36.3 bits (80), Expect = 0.001
Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 4/58 (6%)
Frame = +2
Query: 395 QCFKCFKFNHSAKVCRS----KQMCSYCAGDHHYKECVSDILVCINCGGGHLAVSRDC 556
+CF+C + H A CRS + +C C H + C CGG H +C
Sbjct: 507 RCFRCLEMGHIASNCRSTADRQNLCIRCGLTGHKARSCQNEAKCALCGGAHHIGHSEC 564
Score = 35.5 bits (78), Expect = 0.002
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +2
Query: 398 CFKCFKFNHSAKVCRSKQMCSYCAGDHH--YKECVSDILVC 514
C +C H A+ C+++ C+ C G HH + EC C
Sbjct: 531 CIRCGLTGHKARSCQNEAKCALCGGAHHIGHSECARSAQRC 571
>AB090819-1|BAC57913.1| 400|Anopheles gambiae gag-like protein
protein.
Length = 400
Score = 34.7 bits (76), Expect = 0.003
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Frame = +2
Query: 392 IQCFKCFKFNHSAKVCRSK---QMCSYCAGD-HHYKECVSDILVCINCGGG----HLAVS 547
++CFKC+K H C + ++C C + H +EC + + C++C H+ S
Sbjct: 328 VKCFKCWKLGHKGFECTGQDRSKLCIKCGQEGHKIREC-PNAMTCLDCREDMVEPHITGS 386
Query: 548 RDCP 559
CP
Sbjct: 387 LRCP 390
>AB090822-1|BAC57919.1| 468|Anopheles gambiae gag-like protein
protein.
Length = 468
Score = 31.9 bits (69), Expect = 0.021
Identities = 14/59 (23%), Positives = 24/59 (40%), Gaps = 4/59 (6%)
Frame = +2
Query: 392 IQCFKCFKFNHSAKVCRS----KQMCSYCAGDHHYKECVSDILVCINCGGGHLAVSRDC 556
++C++C + H ++ C S +C C H + C +C G H S C
Sbjct: 404 LRCYRCLERGHVSRDCHSPVNHSNVCIRCGTSGHLAATCEAEVRCASCAGPHRMGSAQC 462
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 27.9 bits (59), Expect = 0.35
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Frame = +3
Query: 618 LCAYSPPRGGRFQYKTLKTIINKL----PKPVFLAGDLNAHHVA 737
+C Y P G +++ + I+ L P+ VF AGDLNA H A
Sbjct: 86 ICCYVSPSAGVSEFEEVMQRIDVLARGHPRVVF-AGDLNAWHTA 128
>DQ974161-1|ABJ52801.1| 409|Anopheles gambiae serpin 2 protein.
Length = 409
Score = 25.8 bits (54), Expect = 1.4
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -3
Query: 244 YDFSIATNIFIDVFV 200
YD +IATN F+D F+
Sbjct: 116 YDLNIATNFFVDDFI 130
>AF203339-1|AAF19834.1| 156|Anopheles gambiae immune-responsive
serpin-related proteinISerpF1 protein.
Length = 156
Score = 25.8 bits (54), Expect = 1.4
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -3
Query: 244 YDFSIATNIFIDVFV 200
YD +IATN F+D F+
Sbjct: 17 YDLNIATNFFVDDFI 31
>AB090815-1|BAC57905.1| 492|Anopheles gambiae gag-like protein
protein.
Length = 492
Score = 25.4 bits (53), Expect = 1.8
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 362 CEVQTYISPLIQCFKCFKFNHSAKVCR 442
C V+ I P +CFKC++ H ++ C+
Sbjct: 407 CPVKIQI-PKRRCFKCWETGHFSRDCK 432
>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
channel alpha1 subunit protein.
Length = 1893
Score = 25.0 bits (52), Expect = 2.4
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 411 SNLIIPPKYVAVSKCVHIVQEITITK 488
S I+PP V+V +CV +++ +TK
Sbjct: 568 STQIMPPLGVSVLRCVRLLRVFKVTK 593
>AJ250916-1|CAB91840.1| 435|Anopheles gambiae serine protease
protein.
Length = 435
Score = 24.2 bits (50), Expect = 4.3
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +1
Query: 310 NFFNNYITPLCVSQL 354
+FFN+YI P+C+ L
Sbjct: 302 SFFNSYIWPICMPPL 316
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 23.8 bits (49), Expect = 5.6
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +3
Query: 570 QTAAVVLKTKNANLSLLCAYSPPRGGRFQYKTLKTIINKLPKP---VFLAGDLNAHHV 734
QT VV + C Y P+ G +++++ I+ + + V LAGD NA H+
Sbjct: 72 QTLGVVAADVGGTTIVSC-YVSPQTGVPEFRSIMEKIDLIVRGCSRVLLAGDFNAMHL 128
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 23.4 bits (48), Expect = 7.4
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +3
Query: 543 YPGTAHEYLQTAAVVLKTKNANLSLLCAYSPPRGGRFQYKTLKTIINKLPKP---VFLAG 713
YP + +V+ N ++++ Y P G Q++ + I+ L + V LAG
Sbjct: 62 YPIQRIRSVTVLGIVVADVNG-ITIVYYYVKPNVGVRQFEEIMERIDILIRGHPRVLLAG 120
Query: 714 DLNAHHVA 737
D NA H A
Sbjct: 121 DFNAWHTA 128
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 23.0 bits (47), Expect = 9.8
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +3
Query: 75 LQMLIALSNLTTFSASTNS 131
LQ ALS++T+FS+S N+
Sbjct: 608 LQSTTALSSITSFSSSGNT 626
>AJ438610-11|CAD27483.1| 765|Anopheles gambiae hypothetical protein
protein.
Length = 765
Score = 23.0 bits (47), Expect = 9.8
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +3
Query: 75 LQMLIALSNLTTFSASTNS 131
LQ ALS++T+FS+S N+
Sbjct: 609 LQSTTALSSITSFSSSGNT 627
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 814,091
Number of Sequences: 2352
Number of extensions: 17770
Number of successful extensions: 87
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 78
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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