Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_N12
(738 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC014904-1|AAH14904.1| 893|Homo sapiens leucine-rich repeats an... 33 1.1
AF274972-1|AAG13461.1| 910|Homo sapiens PIDD protein. 33 1.1
AB209529-1|BAD92766.1| 751|Homo sapiens leucine rich repeat and... 33 1.1
U19765-1|AAA91782.1| 177|Homo sapiens nucleic acid binding prot... 32 2.5
M28372-1|AAA61975.1| 177|Homo sapiens SRE-binding protein protein. 32 2.5
DQ092367-1|AAY96755.1| 172|Homo sapiens cellular nucleic acid b... 32 2.5
DQ092366-1|AAY96754.1| 171|Homo sapiens cellular nucleic acid b... 32 2.5
DQ091187-1|AAY89856.1| 178|Homo sapiens cellular nucleic acid b... 32 2.5
BT019613-1|AAV38419.1| 178|Homo sapiens zinc finger protein 9 (... 32 2.5
BC093058-1|AAH93058.1| 177|Homo sapiens CCHC-type zinc finger, ... 32 2.5
BC014911-1|AAH14911.1| 170|Homo sapiens CNBP protein protein. 32 2.5
BC000288-1|AAH00288.1| 170|Homo sapiens CNBP protein protein. 32 2.5
AY329622-1|AAR89462.1| 177|Homo sapiens zinc finger protein 9 p... 32 2.5
AK054592-1|BAB70769.1| 167|Homo sapiens protein ( Homo sapiens ... 32 2.5
BC107584-1|AAI07585.1| 239|Homo sapiens ZCCHC3 protein protein. 31 5.7
BC069238-1|AAH69238.1| 403|Homo sapiens zinc finger, CCHC domai... 31 5.7
AL034548-4|CAB81631.1| 404|Homo sapiens zinc finger, CCHC domai... 31 5.7
>BC014904-1|AAH14904.1| 893|Homo sapiens leucine-rich repeats and
death domain containing protein.
Length = 893
Score = 33.1 bits (72), Expect = 1.1
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 487 RVCV*HFSMY*LWWGTSSCIPGLPMNIYKQLQL 585
R V HFS Y LW+ T +C+ GL +++L+L
Sbjct: 581 RFQVTHFSWYWLWYTTKNCVGGLARKAWERLRL 613
>AF274972-1|AAG13461.1| 910|Homo sapiens PIDD protein.
Length = 910
Score = 33.1 bits (72), Expect = 1.1
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 487 RVCV*HFSMY*LWWGTSSCIPGLPMNIYKQLQL 585
R V HFS Y LW+ T +C+ GL +++L+L
Sbjct: 581 RFQVTHFSWYWLWYTTKNCVGGLARKAWERLRL 613
>AB209529-1|BAD92766.1| 751|Homo sapiens leucine rich repeat and
death domain containing protein isoform 1 variant
protein.
Length = 751
Score = 33.1 bits (72), Expect = 1.1
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 487 RVCV*HFSMY*LWWGTSSCIPGLPMNIYKQLQL 585
R V HFS Y LW+ T +C+ GL +++L+L
Sbjct: 422 RFQVTHFSWYWLWYTTKNCVGGLARKAWERLRL 454
>U19765-1|AAA91782.1| 177|Homo sapiens nucleic acid binding protein
protein.
Length = 177
Score = 31.9 bits (69), Expect = 2.5
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = +2
Query: 395 QCFKCFKFNHSAKVCRSKQMCSYCAGDHHYK-ECVSDILV-CINCG-GGHLAVSRDC 556
+C+ C +F H K C +K C C H C V C CG GHLA R+C
Sbjct: 118 KCYSCGEFGHIQKDC-TKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLA--REC 171
>M28372-1|AAA61975.1| 177|Homo sapiens SRE-binding protein protein.
Length = 177
Score = 31.9 bits (69), Expect = 2.5
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = +2
Query: 395 QCFKCFKFNHSAKVCRSKQMCSYCAGDHHYK-ECVSDILV-CINCG-GGHLAVSRDC 556
+C+ C +F H K C +K C C H C V C CG GHLA R+C
Sbjct: 118 KCYSCGEFGHIQKDC-TKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLA--REC 171
>DQ092367-1|AAY96755.1| 172|Homo sapiens cellular nucleic acid
binding protein beta variant 2 protein.
Length = 172
Score = 31.9 bits (69), Expect = 2.5
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = +2
Query: 395 QCFKCFKFNHSAKVCRSKQMCSYCAGDHHYK-ECVSDILV-CINCG-GGHLAVSRDC 556
+C+ C +F H K C +K C C H C V C CG GHLA R+C
Sbjct: 113 KCYSCGEFGHIQKDC-TKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLA--REC 166
>DQ092366-1|AAY96754.1| 171|Homo sapiens cellular nucleic acid
binding protein beta variant 1 protein.
Length = 171
Score = 31.9 bits (69), Expect = 2.5
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = +2
Query: 395 QCFKCFKFNHSAKVCRSKQMCSYCAGDHHYK-ECVSDILV-CINCG-GGHLAVSRDC 556
+C+ C +F H K C +K C C H C V C CG GHLA R+C
Sbjct: 112 KCYSCGEFGHIQKDC-TKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLA--REC 165
>DQ091187-1|AAY89856.1| 178|Homo sapiens cellular nucleic acid
binding protein alpha variant 1 protein.
Length = 178
Score = 31.9 bits (69), Expect = 2.5
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = +2
Query: 395 QCFKCFKFNHSAKVCRSKQMCSYCAGDHHYK-ECVSDILV-CINCG-GGHLAVSRDC 556
+C+ C +F H K C +K C C H C V C CG GHLA R+C
Sbjct: 119 KCYSCGEFGHIQKDC-TKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLA--REC 172
>BT019613-1|AAV38419.1| 178|Homo sapiens zinc finger protein 9 (a
cellular retroviral nucleic acid binding protein)
protein.
Length = 178
Score = 31.9 bits (69), Expect = 2.5
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = +2
Query: 395 QCFKCFKFNHSAKVCRSKQMCSYCAGDHHYK-ECVSDILV-CINCG-GGHLAVSRDC 556
+C+ C +F H K C +K C C H C V C CG GHLA R+C
Sbjct: 119 KCYSCGEFGHIQKDC-TKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLA--REC 172
>BC093058-1|AAH93058.1| 177|Homo sapiens CCHC-type zinc finger,
nucleic acid binding protein protein.
Length = 177
Score = 31.9 bits (69), Expect = 2.5
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = +2
Query: 395 QCFKCFKFNHSAKVCRSKQMCSYCAGDHHYK-ECVSDILV-CINCG-GGHLAVSRDC 556
+C+ C +F H K C +K C C H C V C CG GHLA R+C
Sbjct: 118 KCYSCGEFGHIQKDC-TKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLA--REC 171
>BC014911-1|AAH14911.1| 170|Homo sapiens CNBP protein protein.
Length = 170
Score = 31.9 bits (69), Expect = 2.5
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = +2
Query: 395 QCFKCFKFNHSAKVCRSKQMCSYCAGDHHYK-ECVSDILV-CINCG-GGHLAVSRDC 556
+C+ C +F H K C +K C C H C V C CG GHLA R+C
Sbjct: 111 KCYSCGEFGHIQKDC-TKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLA--REC 164
>BC000288-1|AAH00288.1| 170|Homo sapiens CNBP protein protein.
Length = 170
Score = 31.9 bits (69), Expect = 2.5
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = +2
Query: 395 QCFKCFKFNHSAKVCRSKQMCSYCAGDHHYK-ECVSDILV-CINCG-GGHLAVSRDC 556
+C+ C +F H K C +K C C H C V C CG GHLA R+C
Sbjct: 111 KCYSCGEFGHIQKDC-TKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLA--REC 164
>AY329622-1|AAR89462.1| 177|Homo sapiens zinc finger protein 9
protein.
Length = 177
Score = 31.9 bits (69), Expect = 2.5
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = +2
Query: 395 QCFKCFKFNHSAKVCRSKQMCSYCAGDHHYK-ECVSDILV-CINCG-GGHLAVSRDC 556
+C+ C +F H K C +K C C H C V C CG GHLA R+C
Sbjct: 118 KCYSCGEFGHIQKDC-TKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLA--REC 171
>AK054592-1|BAB70769.1| 167|Homo sapiens protein ( Homo sapiens
cDNA FLJ30030 fis, clone 3NB692001339, highly similar to
CELLULAR NUCLEIC ACID BINDING PROTEIN. ).
Length = 167
Score = 31.9 bits (69), Expect = 2.5
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = +2
Query: 395 QCFKCFKFNHSAKVCRSKQMCSYCAGDHHYK-ECVSDILV-CINCG-GGHLAVSRDC 556
+C+ C +F H K C +K C C H C V C CG GHLA R+C
Sbjct: 108 KCYSCGEFGHIQKDC-TKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLA--REC 161
>BC107584-1|AAI07585.1| 239|Homo sapiens ZCCHC3 protein protein.
Length = 239
Score = 30.7 bits (66), Expect = 5.7
Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = +2
Query: 356 FRCEVQTYISPLI---QCFKCFKFNHSAKVCRSKQMCSYCA-GDHHYKEC 493
F+C +T++S +CF+C + H + CR +C+ C H + +C
Sbjct: 172 FKCGSRTHMSGSCTQDRCFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQC 221
>BC069238-1|AAH69238.1| 403|Homo sapiens zinc finger, CCHC domain
containing 3 protein.
Length = 403
Score = 30.7 bits (66), Expect = 5.7
Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = +2
Query: 356 FRCEVQTYISPLI---QCFKCFKFNHSAKVCRSKQMCSYCA-GDHHYKEC 493
F+C +T++S +CF+C + H + CR +C+ C H + +C
Sbjct: 336 FKCGSRTHMSGSCTQDRCFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQC 385
>AL034548-4|CAB81631.1| 404|Homo sapiens zinc finger, CCHC domain
containing 3 protein.
Length = 404
Score = 30.7 bits (66), Expect = 5.7
Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = +2
Query: 356 FRCEVQTYISPLI---QCFKCFKFNHSAKVCRSKQMCSYCA-GDHHYKEC 493
F+C +T++S +CF+C + H + CR +C+ C H + +C
Sbjct: 337 FKCGSRTHMSGSCTQDRCFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQC 386
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,171,439
Number of Sequences: 237096
Number of extensions: 2400767
Number of successful extensions: 7517
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 7327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7517
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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