Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_N12
(738 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF237761-1|AAF81410.1| 501|Drosophila melanogaster unknown prot... 68 1e-11
M38643-1|AAA28939.1| 549|Drosophila melanogaster protein ( D.me... 65 1e-10
M22874-1|AAA28674.1| 583|Drosophila melanogaster nucleic acid-b... 65 1e-10
AJ302712-1|CAC16870.1| 433|Drosophila melanogaster gag protein. 54 2e-07
M14954-1|AAA70221.1| 426|Drosophila melanogaster putative ORF1 ... 54 2e-07
AJ635224-1|CAG25619.1| 951|Drosophila melanogaster gag protein ... 54 3e-07
X68130-1|CAA48237.1| 943|Drosophila melanogaster protein ( D.me... 50 2e-06
U06920-1|AAC17188.3| 921|Drosophila melanogaster probable gag p... 50 2e-06
AJ542581-1|CAD65868.3| 965|Drosophila melanogaster gag protein ... 50 2e-06
X68816-2|CAA48714.1| 536|Drosophila melanogaster T-element prot... 46 4e-05
S56442-2|AAA14198.2| 536|Drosophila melanogaster Orf2 protein. 46 4e-05
M17214-1|AAA28507.1| 122|Drosophila melanogaster protein ( D.me... 44 3e-04
U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative singl... 42 0.001
AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein ... 42 0.001
AY561850-1|AAS68533.1| 970|Drosophila melanogaster gag protein ... 42 0.001
AY035777-1|AAK77970.1| 257|Drosophila melanogaster gag protein ... 42 0.001
AJ566116-1|CAD92792.1| 970|Drosophila melanogaster gag protein ... 42 0.001
X17551-1|CAA35586.1| 565|Drosophila melanogaster ORF1 for putat... 41 0.002
BT014916-1|AAT47767.1| 409|Drosophila melanogaster RE14563p pro... 41 0.002
X51968-1|CAA36226.1| 471|Drosophila melanogaster protein ( Dros... 39 0.008
AJ278684-1|CAB99191.1| 488|Drosophila melanogaster gag-like pro... 38 0.011
AY118596-1|AAM49965.1| 165|Drosophila melanogaster LD48005p pro... 37 0.033
AY075371-1|AAL68216.1| 165|Drosophila melanogaster GM14667p pro... 37 0.033
AE013599-3513|AAN16117.1| 165|Drosophila melanogaster CG3800-PA... 37 0.033
AY118707-1|AAM50567.1| 186|Drosophila melanogaster AT22983p pro... 35 0.13
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 34 0.23
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 34 0.23
AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical... 33 0.41
AY118620-1|AAM49989.1| 1394|Drosophila melanogaster LP11788p pro... 30 2.9
AE014297-4145|AAF56722.1| 1511|Drosophila melanogaster CG5639-PA... 30 2.9
AY118791-1|AAM50651.1| 64|Drosophila melanogaster GH15938p pro... 29 5.0
AE014298-622|AAF45940.2| 64|Drosophila melanogaster CG3712-PA ... 29 5.0
AE014297-1133|AAF54518.1| 1436|Drosophila melanogaster CG11872-P... 29 6.6
U23420-1|AAB03640.1| 1607|Drosophila melanogaster unknown protein. 29 8.7
U11691-1|AAA19905.1| 796|Drosophila melanogaster E239.9-1 protein. 29 8.7
AY180917-1|AAN87269.1| 2360|Drosophila melanogaster ORF protein. 29 8.7
>AF237761-1|AAF81410.1| 501|Drosophila melanogaster unknown
protein.
Length = 501
Score = 68.1 bits (159), Expect = 1e-11
Identities = 47/187 (25%), Positives = 83/187 (44%), Gaps = 16/187 (8%)
Frame = +2
Query: 44 ASQIGVNFQKAADANSFIKLDNFLSKHKFRAFIPAHLVEKVGVIKFVPTDLSNEDIYKNI 223
AS GV AADAN+F + N+L ++ + +++ + L + ++ I
Sbjct: 158 ASMSGVLRLYAADANTFRTIVNWLEIEEYE--FHCYQLKEDRPYRVCVKGLHHSTLHHQI 215
Query: 224 SSDAE-----IISIKRFMKRN--ADKKLMPMSSVAITFSTTTLPRYVYLNLFRCEVQTYI 382
+ E ++ I ++RN K P++ + + + + C ++ I
Sbjct: 216 KDELEKIGHKVLDIHTPLRRNEPGTSKASPVNMFFLNIAAAANNKEILAVKALCHMRVVI 275
Query: 383 SPL------IQCFKCFKFNHSAKVCRSKQMCSYCAGDHHYKECVS---DILVCINCGGGH 535
PL +QC +C + H+AK CR +C CAG+H K+C ++ C NCGG H
Sbjct: 276 EPLRKRNAIVQCHRCQQIGHTAKYCRKAHICVKCAGEHPAKDCTRPRIELCTCYNCGGQH 335
Query: 536 LAVSRDC 556
A + C
Sbjct: 336 PANYKGC 342
>M38643-1|AAA28939.1| 549|Drosophila melanogaster protein (
D.melanogaster mobileelement jockey gag-specific protein
gene, complete cds.).
Length = 549
Score = 64.9 bits (151), Expect = 1e-10
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Frame = +2
Query: 389 LIQCFKCFKFNHSAKVCRSKQMCSYCAGDHH--YKECVSDILVCINCGGGHLAVSRDCP 559
L+QC +C F HS C +C C+G H + C+SD+ +CINCGG H++ + CP
Sbjct: 368 LLQCQRCQIFGHSKNYCAQDPICGKCSGPHMTGFALCISDVCLCINCGGDHVSTDKSCP 426
>M22874-1|AAA28674.1| 583|Drosophila melanogaster nucleic
acid-binding protiein protein.
Length = 583
Score = 64.9 bits (151), Expect = 1e-10
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Frame = +2
Query: 389 LIQCFKCFKFNHSAKVCRSKQMCSYCAGDHH--YKECVSDILVCINCGGGHLAVSRDCP 559
L+QC +C F HS C +C C+G H + C+SD+ +CINCGG H++ + CP
Sbjct: 402 LLQCQRCQIFGHSKNYCAQDPICGKCSGPHMTGFALCISDVCLCINCGGDHVSTDKSCP 460
>AJ302712-1|CAC16870.1| 433|Drosophila melanogaster gag protein.
Length = 433
Score = 54.4 bits (125), Expect = 2e-07
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 1/124 (0%)
Frame = +2
Query: 191 DLSNEDIYKNISSDAEIISIKRFMKRNADKKLMPMSSVAITFSTTTLPRYVYLNLFRCEV 370
++ +I + + S + S+ +F K D P V +TF TLP + ++ +V
Sbjct: 137 NIPENEIVEELKSQ-NVHSVFKFTKM-IDGTPKPFGKVLVTFDRFTLPSKLTVSWHTVKV 194
Query: 371 QTYISPLIQCFKCFKFNHSAKVCRSKQMCSYC-AGDHHYKECVSDILVCINCGGGHLAVS 547
YI ++C C H++K C++ C C H C + C NC G H A S
Sbjct: 195 SEYIPNPMRCKSCQLLGHTSKHCKNPPACVSCNLAPHLPVPCTR--IFCANCTGQHPASS 252
Query: 548 RDCP 559
+CP
Sbjct: 253 PECP 256
>M14954-1|AAA70221.1| 426|Drosophila melanogaster putative ORF1
protein.
Length = 426
Score = 54.0 bits (124), Expect = 2e-07
Identities = 37/142 (26%), Positives = 61/142 (42%), Gaps = 17/142 (11%)
Frame = +2
Query: 200 NEDIYKNISSDAEIISIKRFMKR-----NADKK---LMPMSSVAITFSTTTLPRYVYLNL 355
+ED ++ +K+ MKR N+D L+ + ITF + LP V +
Sbjct: 114 DEDTILQELKPQKVSEVKKIMKRQNPNSNSDTNNITLVETGLIIITFESHKLPEIVRIGY 173
Query: 356 FRCEVQTYISPLIQCFKCFKFNHSAKVCRSKQMCSYCAGDHHY---KECVSDILVCINCG 526
V+ YI ++C KC +F H +C+S + C C+ H ++C ++ C+NC
Sbjct: 174 ETVRVRDYIPLPLRCKKCLRFGHPTPICKSVETCINCSETKHTNDGEKCTNE-KNCLNCR 232
Query: 527 GG------HLAVSRDCP*IFTN 574
H + R CP N
Sbjct: 233 NNPELDHQHSPIDRKCPTFIKN 254
>AJ635224-1|CAG25619.1| 951|Drosophila melanogaster gag protein
protein.
Length = 951
Score = 53.6 bits (123), Expect = 3e-07
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +2
Query: 392 IQCFKCFKFNHSAKVCRSKQMCSYCAGDHHYKECV---SDILVCINCGGGHLAVSRDCP 559
+QC++C F H+ C C CAGDH C S C+NC G H++ + CP
Sbjct: 654 VQCYRCQGFRHAKNSCMKPPRCMKCAGDHLSSCCTKPRSTPATCVNCSGEHISAYKGCP 712
>X68130-1|CAA48237.1| 943|Drosophila melanogaster protein (
D.melanogaster DNA sequenceof Het-A transposable element
9D4. ).
Length = 943
Score = 50.4 bits (115), Expect = 2e-06
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +2
Query: 392 IQCFKCFKFNHSAKVCRSKQMCSYCAGDHHYKECV---SDILVCINCGGGHLAVSRDCP 559
+QC++C F H+ C C CAG+H C + C+NC G H++ + CP
Sbjct: 646 VQCYRCQGFRHAKNSCMRPPRCMKCAGEHLSSCCTKPRTTPATCVNCSGQHISAYKGCP 704
>U06920-1|AAC17188.3| 921|Drosophila melanogaster probable gag
protein protein.
Length = 921
Score = 50.4 bits (115), Expect = 2e-06
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +2
Query: 392 IQCFKCFKFNHSAKVCRSKQMCSYCAGDHHYKECV---SDILVCINCGGGHLAVSRDCP 559
+QC++C F H+ C C CAG+H C + C+NC G H++ + CP
Sbjct: 624 VQCYRCQGFRHAKNSCMRPPRCMKCAGEHLSSCCTKPRTTPATCVNCSGQHISAYKGCP 682
>AJ542581-1|CAD65868.3| 965|Drosophila melanogaster gag protein
protein.
Length = 965
Score = 50.4 bits (115), Expect = 2e-06
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +2
Query: 392 IQCFKCFKFNHSAKVCRSKQMCSYCAGDHHYKECV---SDILVCINCGGGHLAVSRDCP 559
+QC++C F HS C C CAG H C + C+NC G H++ + CP
Sbjct: 661 VQCYRCQGFRHSKNSCMRPPRCMKCAGGHLSSCCTKPRTTPATCVNCSGEHISAYKGCP 719
>X68816-2|CAA48714.1| 536|Drosophila melanogaster T-element
protein.
Length = 536
Score = 46.4 bits (105), Expect = 4e-05
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +2
Query: 392 IQCFKCFKFNHSAKVCRSKQMCSYCAGDHHYKECV---SDILVCINCGGGHLAVSRDCP 559
+QC++C F H+ C C AG+H C + C+NC G H++ + CP
Sbjct: 239 VQCYRCQGFRHAKNSCMRPPRCMKSAGEHLSSCCTKPRTTPATCVNCSGQHISAYKGCP 297
>S56442-2|AAA14198.2| 536|Drosophila melanogaster Orf2 protein.
Length = 536
Score = 46.4 bits (105), Expect = 4e-05
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +2
Query: 392 IQCFKCFKFNHSAKVCRSKQMCSYCAGDHHYKECV---SDILVCINCGGGHLAVSRDCP 559
+QC++C F H+ C C AG+H C + C+NC G H++ + CP
Sbjct: 239 VQCYRCQGFRHAKNSCMRPPRCMKSAGEHLSSCCTKPRTTPATCVNCSGQHISAYKGCP 297
>M17214-1|AAA28507.1| 122|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 122
Score = 43.6 bits (98), Expect = 3e-04
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
Frame = +2
Query: 392 IQCFKCFKFNHSAKVCRSKQMCSYCAGDHHYKECVSD-----ILVCINCGGGHLAVSRDC 556
+QC C ++ H+ C +C C H K+C + C NCGG H A R C
Sbjct: 38 VQCTNCQEYGHTRSYCTLAPVCVVCGDLHDSKQCQINKENACEKKCNNCGGNHTANYRGC 97
Query: 557 P 559
P
Sbjct: 98 P 98
>U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative
single-stranded nucleicacid binding protein protein.
Length = 1043
Score = 41.5 bits (93), Expect = 0.001
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Frame = +2
Query: 395 QCFKCFKFNHSAKVCRSKQMCSYCAGDHHYKECVSD---ILVCINCGGGHLAVSRDCP 559
QC +C F H+ CR+ C C H C C NC G H++ + CP
Sbjct: 794 QCHRCQCFGHTKNYCRNPFKCMKCGQLHATVSCTKPKNLPATCANCNGSHVSSYKGCP 851
>AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein
protein.
Length = 1047
Score = 41.5 bits (93), Expect = 0.001
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Frame = +2
Query: 395 QCFKCFKFNHSAKVCRSKQMCSYCAGDHHYKECVSD---ILVCINCGGGHLAVSRDCP 559
QC +C F H+ CR+ C C H C C NC G H++ + CP
Sbjct: 794 QCHRCQCFGHTKNYCRNPFKCMKCGQLHASVSCTKPKNLPATCANCNGSHVSSYKGCP 851
>AY561850-1|AAS68533.1| 970|Drosophila melanogaster gag protein
protein.
Length = 970
Score = 41.5 bits (93), Expect = 0.001
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Frame = +2
Query: 395 QCFKCFKFNHSAKVCRSKQMCSYCAGDHHYKECVSD---ILVCINCGGGHLAVSRDCP 559
QC +C F H+ CR+ C C H C C NC G H++ + CP
Sbjct: 717 QCHRCQCFGHTKNYCRNPFKCMKCGQLHATVSCTKPKNLPATCANCNGSHVSSYKGCP 774
>AY035777-1|AAK77970.1| 257|Drosophila melanogaster gag protein
protein.
Length = 257
Score = 41.5 bits (93), Expect = 0.001
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Frame = +2
Query: 395 QCFKCFKFNHSAKVCRSKQMCSYCAGDHHYKECVSD---ILVCINCGGGHLAVSRDCP 559
QC +C F H+ CR+ C C H C C NC G H++ + CP
Sbjct: 4 QCHRCQCFGHTKNYCRNPFKCMKCGQLHATVSCTKPKNLPATCANCNGSHVSSYKGCP 61
>AJ566116-1|CAD92792.1| 970|Drosophila melanogaster gag protein
protein.
Length = 970
Score = 41.5 bits (93), Expect = 0.001
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Frame = +2
Query: 395 QCFKCFKFNHSAKVCRSKQMCSYCAGDHHYKECVSD---ILVCINCGGGHLAVSRDCP 559
QC +C F H+ CR+ C C H C C NC G H++ + CP
Sbjct: 717 QCHRCQCFGHTKNYCRNPFKCMKCGQLHATVSCTKPKNLPATCANCNGSHVSSYKGCP 774
>X17551-1|CAA35586.1| 565|Drosophila melanogaster ORF1 for putative
RNA bindingprotein protein.
Length = 565
Score = 40.7 bits (91), Expect = 0.002
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Frame = +2
Query: 380 ISPLIQCFKCFKFNHSAKVCRSKQMCSYCAGDHHYKECVSD-----ILVCINCGGGHLAV 544
I+P +QC C ++ H+ C K +C C+ H C + + C NCG H A
Sbjct: 379 INP-VQCTNCQEYGHTKAYCTLKSVCVVCSEPHTTANCPKNKDDKSVKKCSNCGEKHTAN 437
Query: 545 SRDC 556
R C
Sbjct: 438 YRGC 441
>BT014916-1|AAT47767.1| 409|Drosophila melanogaster RE14563p
protein.
Length = 409
Score = 40.7 bits (91), Expect = 0.002
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Frame = +2
Query: 380 ISPLIQCFKCFKFNHSAKVCRSKQMCSYCAGDHHYKECVSD-----ILVCINCGGGHLAV 544
I+P +QC C ++ H+ C K +C C+ H C + + C NCG H A
Sbjct: 223 INP-VQCTNCQEYGHTKAYCTLKSVCVVCSEPHTTANCPKNKDDKSVKKCSNCGEKHTAN 281
Query: 545 SRDC 556
R C
Sbjct: 282 YRGC 285
>X51968-1|CAA36226.1| 471|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 471
Score = 38.7 bits (86), Expect = 0.008
Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 8/82 (9%)
Frame = +2
Query: 338 YVYLNLFRC--EVQTYISPLIQCFKCFKFNHSAKVCRSKQ-MCSYCAGDHHYKECVSDIL 508
Y+ FRC +V+TY C +C F+H CR K+ +C C H + +
Sbjct: 382 YIKWFSFRCRSQVRTYA-----CHRCVGFDHKVSECRQKESVCRQCGQQGHTAAKCQNPV 436
Query: 509 VCINC-----GGGHLAVSRDCP 559
C NC GH +S CP
Sbjct: 437 DCRNCRHRGQPSGHYMLSNACP 458
>AJ278684-1|CAB99191.1| 488|Drosophila melanogaster gag-like
protein protein.
Length = 488
Score = 38.3 bits (85), Expect = 0.011
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 7/87 (8%)
Frame = +2
Query: 359 RCEVQTYISPLIQCFKCFKFNHSAKVCRS--KQMCSYCAGDHHYKE--CVSD--ILVC-I 517
RC + + P I+CF+C +F H A C+S + C G+H +K CV+ L+C
Sbjct: 397 RCRIAQDVRP-IRCFRCLEFGHRAPYCKSVDRSDCCLRCGEHGHKAKGCVAPPRCLICSS 455
Query: 518 NCGGGHLAVSRDCP*IFTNSCSCSKNQ 598
+ H CP N+ + Q
Sbjct: 456 DVDKNHATGGFACPTYKANTKGANSRQ 482
>AY118596-1|AAM49965.1| 165|Drosophila melanogaster LD48005p
protein.
Length = 165
Score = 36.7 bits (81), Expect = 0.033
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = +2
Query: 395 QCFKCFKFNHSAKVC-RSKQMCSYCAG-DHHYKECV-SDILVCINCG-GGHLAVSRDCP 559
+C+KC +F H A+ C + C C G H K+C +D C C GH R+CP
Sbjct: 56 KCYKCNQFGHFARACPEEAERCYRCNGIGHISKDCTQADNPTCYRCNKTGHWV--RNCP 112
>AY075371-1|AAL68216.1| 165|Drosophila melanogaster GM14667p
protein.
Length = 165
Score = 36.7 bits (81), Expect = 0.033
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = +2
Query: 395 QCFKCFKFNHSAKVC-RSKQMCSYCAG-DHHYKECV-SDILVCINCG-GGHLAVSRDCP 559
+C+KC +F H A+ C + C C G H K+C +D C C GH R+CP
Sbjct: 56 KCYKCNQFGHFARACPEEAERCYRCNGIGHISKDCTQADNPTCYRCNKTGHWV--RNCP 112
>AE013599-3513|AAN16117.1| 165|Drosophila melanogaster CG3800-PA
protein.
Length = 165
Score = 36.7 bits (81), Expect = 0.033
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = +2
Query: 395 QCFKCFKFNHSAKVC-RSKQMCSYCAG-DHHYKECV-SDILVCINCG-GGHLAVSRDCP 559
+C+KC +F H A+ C + C C G H K+C +D C C GH R+CP
Sbjct: 56 KCYKCNQFGHFARACPEEAERCYRCNGIGHISKDCTQADNPTCYRCNKTGHWV--RNCP 112
>AY118707-1|AAM50567.1| 186|Drosophila melanogaster AT22983p
protein.
Length = 186
Score = 34.7 bits (76), Expect = 0.13
Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
Frame = +2
Query: 380 ISPLIQCFKCFKFNHSAKVCRS----KQMCSYCAGDHHYKECVSDILVCINCGGGHLAVS 547
+ P +CF+C + H A CRS Q C C H EC + + G+ A S
Sbjct: 94 LEPRQRCFRCLEEGHIAAHCRSTVDRSQCCFRCGTAGHKAECPKEAKCFLCASRGNQATS 153
Query: 548 RD 553
D
Sbjct: 154 AD 155
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 33.9 bits (74), Expect = 0.23
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +3
Query: 564 YLQTAAVVLKTKNANLSLLCAYSPPRGGRFQYKTLKTIINKLPKPVFLAGDLNAHH 731
YLQ+ ++ L+ N + +L Y PPR + + ++ N L AGD NA H
Sbjct: 87 YLQSTSIALQLNNGSTTLAAVYCPPRFPISEDQFME-FFNTLGDRFIAAGDYNAKH 141
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 33.9 bits (74), Expect = 0.23
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +3
Query: 564 YLQTAAVVLKTKNANLSLLCAYSPPRGGRFQYKTLKTIINKLPKPVFLAGDLNAHH 731
YLQ+ ++ L+ N + +L Y PPR + + ++ N L AGD NA H
Sbjct: 87 YLQSTSIALQLNNGSTTLAAVYCPPRFPISEDQFME-FFNTLGDRFIAAGDYNAKH 141
>AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical
protein protein.
Length = 1830
Score = 33.1 bits (72), Expect = 0.41
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +2
Query: 377 YISPLIQCFKCFKFNHSAKVCRSKQMCSYCAGDHH 481
YI C CF H + C S C C G HH
Sbjct: 457 YIKKKQLCLNCFARGHQLRDCTSMHSCFTCKGRHH 491
>AY118620-1|AAM49989.1| 1394|Drosophila melanogaster LP11788p
protein.
Length = 1394
Score = 30.3 bits (65), Expect = 2.9
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Frame = +2
Query: 515 INCGGGHLAVSRDCP*I----FTNSCSCSKNQECKFILVVCI 628
+ C G+ S CP + N SCS ++EC+ I V C+
Sbjct: 801 LECESGYQMDSNGCPTCECRNYCNEVSCSPHEECQLISVECV 842
>AE014297-4145|AAF56722.1| 1511|Drosophila melanogaster CG5639-PA
protein.
Length = 1511
Score = 30.3 bits (65), Expect = 2.9
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Frame = +2
Query: 515 INCGGGHLAVSRDCP*I----FTNSCSCSKNQECKFILVVCI 628
+ C G+ S CP + N SCS ++EC+ I V C+
Sbjct: 918 LECESGYQMDSNGCPTCECRNYCNEVSCSPHEECQLISVECV 959
>AY118791-1|AAM50651.1| 64|Drosophila melanogaster GH15938p
protein.
Length = 64
Score = 29.5 bits (63), Expect = 5.0
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +2
Query: 59 VNFQKAADANSFIKLDNFLSKHKFRAFIPAHLVEKVGVIKFVPTDLSNEDIYK 217
V F+K + L++ +S H+F AF L +K+ +I+F P + E +Y+
Sbjct: 6 VLFKKVKSKRIMVVLESVVSGHQFNAF-RDRLADKLEIIRFDPY-IQQESLYR 56
>AE014298-622|AAF45940.2| 64|Drosophila melanogaster CG3712-PA
protein.
Length = 64
Score = 29.5 bits (63), Expect = 5.0
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +2
Query: 59 VNFQKAADANSFIKLDNFLSKHKFRAFIPAHLVEKVGVIKFVPTDLSNEDIYK 217
V F+K + L++ +S H+F AF L +K+ +I+F P + E +Y+
Sbjct: 6 VLFKKVKSKRIMVVLESVVSGHQFNAF-RDRLADKLEIIRFDPY-IQQESLYR 56
>AE014297-1133|AAF54518.1| 1436|Drosophila melanogaster CG11872-PA
protein.
Length = 1436
Score = 29.1 bits (62), Expect = 6.6
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +2
Query: 224 SSDAEIISIKRFMKRNADKKLMPMSSVAITFSTTT 328
SSD+ +IK+ +K + KLMP + V T TTT
Sbjct: 630 SSDSRPTTIKKIIKVSKKSKLMPPTPVTPTTPTTT 664
>U23420-1|AAB03640.1| 1607|Drosophila melanogaster unknown protein.
Length = 1607
Score = 28.7 bits (61), Expect = 8.7
Identities = 10/28 (35%), Positives = 11/28 (39%)
Frame = +2
Query: 398 CFKCFKFNHSAKVCRSKQMCSYCAGDHH 481
CF C H C S+ C C HH
Sbjct: 215 CFNCLSPAHMVGNCTSRHTCRICRRKHH 242
>U11691-1|AAA19905.1| 796|Drosophila melanogaster E239.9-1 protein.
Length = 796
Score = 28.7 bits (61), Expect = 8.7
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 398 CFKCFKFNHSAKVCRSKQMCSYCAGDHH 481
C +C + K C S+Q+CS C HH
Sbjct: 386 CLRCLRHPFGKK-CISEQLCSTCRKPHH 412
>AY180917-1|AAN87269.1| 2360|Drosophila melanogaster ORF protein.
Length = 2360
Score = 28.7 bits (61), Expect = 8.7
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 398 CFKCFKFNHSAKVCRSKQMCSYCAGDHH 481
C +C + K C S+Q+CS C HH
Sbjct: 465 CLRCLRHPFGKK-CISEQLCSTCRKPHH 491
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,988,794
Number of Sequences: 53049
Number of extensions: 747291
Number of successful extensions: 1628
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1609
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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