Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_N12
(738 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81481-3|CAB03949.1| 1496|Caenorhabditis elegans Hypothetical pr... 40 0.002
U97593-1|AAB52875.1| 715|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical pr... 38 0.006
U58740-1|AAB00611.1| 1073|Caenorhabditis elegans Hypothetical pr... 38 0.006
AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical... 38 0.006
AL032651-1|CAB60580.1| 681|Caenorhabditis elegans Hypothetical ... 36 0.023
AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical ... 36 0.023
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 31 0.64
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 31 0.64
Z81116-7|CAB03306.1| 669|Caenorhabditis elegans Hypothetical pr... 31 0.85
U41553-1|AAA83291.1| 1250|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 29 3.4
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 29 3.4
Z83229-1|CAB05738.1| 281|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z81476-2|CAB03918.1| 1469|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z68749-7|CAA92962.2| 728|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z68749-6|CAC35818.1| 689|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z68219-9|CAA92483.2| 728|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z68219-7|CAC35827.1| 689|Caenorhabditis elegans Hypothetical pr... 28 6.0
U41031-2|AAA82619.2| 615|Caenorhabditis elegans Hypothetical pr... 28 6.0
AY851363-1|AAW34127.1| 728|Caenorhabditis elegans fibulin-1D sp... 28 6.0
AF070477-1|AAC24035.1| 589|Caenorhabditis elegans fibulin-1D pr... 28 6.0
AF051403-1|AAC28324.1| 689|Caenorhabditis elegans fibulin-1 iso... 28 6.0
AF051401-1|AAC28321.1| 689|Caenorhabditis elegans fibulin-1 iso... 28 6.0
Z71266-8|CAA95846.2| 729|Caenorhabditis elegans Hypothetical pr... 28 7.9
>Z81481-3|CAB03949.1| 1496|Caenorhabditis elegans Hypothetical
protein C38D9.3 protein.
Length = 1496
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 398 CFKCFKFNHSAKVCRSKQMCSYCAGDHHYKEC 493
C C +H K CRS + C+YC G HH C
Sbjct: 731 CANCLNPHHDIKKCRSYRSCAYCMGKHHSGAC 762
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 431 KVCRSKQMCSYCAGDHH-YKECVSDILVCINCGGGH 535
+V R K++C+ C HH K+C S C C G H
Sbjct: 723 EVIREKRLCANCLNPHHDIKKCRS-YRSCAYCMGKH 757
>U97593-1|AAB52875.1| 715|Caenorhabditis elegans Hypothetical
protein C46G7.3 protein.
Length = 715
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +2
Query: 365 EVQTYISPLIQCFKCFKFNHSAKVCRSKQMCSYCAGDHHYKEC 493
EV+ +I+ +C C HS+ +C S C+YC+G HH C
Sbjct: 639 EVRRFIANDNRCAVCAGERHSSSMCYSTLKCTYCSGRHHPAGC 681
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = +2
Query: 455 CSYCAGDHHYKECVSDILVCINCGGGH 535
C+ CAG+ H L C C G H
Sbjct: 650 CAVCAGERHSSSMCYSTLKCTYCSGRH 676
>Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical
protein F15D4.7 protein.
Length = 2268
Score = 38.3 bits (85), Expect = 0.006
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 398 CFKCFKFNHSAKVCRSKQMCSYCAGDHHYKEC 493
C C +H + CRS + C+YC G HH C
Sbjct: 692 CANCLNPHHDIEKCRSYRSCAYCMGKHHSGAC 723
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 431 KVCRSKQMCSYCAGDHHYKECVSDILVCINCGGGH 535
+V R K++C+ C HH E C C G H
Sbjct: 684 EVIREKKLCANCLNPHHDIEKCRSYRSCAYCMGKH 718
>U58740-1|AAB00611.1| 1073|Caenorhabditis elegans Hypothetical
protein R09H3.1 protein.
Length = 1073
Score = 38.3 bits (85), Expect = 0.006
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 398 CFKCFKFNHSAKVCRSKQMCSYCAGDHH 481
C C NH + C+S + C+YCAG HH
Sbjct: 551 CAICLVRNHHTQQCKSNRKCTYCAGAHH 578
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +2
Query: 440 RSKQMCSYC-AGDHHYKECVSDILVCINCGGGH 535
R K +C+ C +HH ++C S+ C C G H
Sbjct: 546 RDKNLCAICLVRNHHTQQCKSN-RKCTYCAGAH 577
>AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical
protein F15D4.7 protein.
Length = 2268
Score = 38.3 bits (85), Expect = 0.006
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 398 CFKCFKFNHSAKVCRSKQMCSYCAGDHHYKEC 493
C C +H + CRS + C+YC G HH C
Sbjct: 692 CANCLNPHHDIEKCRSYRSCAYCMGKHHSGAC 723
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 431 KVCRSKQMCSYCAGDHHYKECVSDILVCINCGGGH 535
+V R K++C+ C HH E C C G H
Sbjct: 684 EVIREKKLCANCLNPHHDIEKCRSYRSCAYCMGKH 718
>AL032651-1|CAB60580.1| 681|Caenorhabditis elegans Hypothetical
protein Y6D1A.1 protein.
Length = 681
Score = 36.3 bits (80), Expect = 0.023
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +2
Query: 362 CEVQTYISPLIQCFKCFKFNHSAKVCRSKQMCSYCAGDHHYKECVS-DILVCINC 523
C + Y + QCFK N+ K C+ C G H +K+C S VC+ C
Sbjct: 267 CALCGYRHSVDQCFKFINVNNRRKALIMAGRCTRCLGRHSFKDCRSAKFNVCMYC 321
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +2
Query: 395 QCFKCFKFNHSAKVCRSKQMCSYCAGDHHYKEC-VSDILVCINC 523
QCFK N+ + C+ C G H +K C + + VC C
Sbjct: 607 QCFKIIDVNNRREELLMGGRCTRCLGKHSFKNCRLVKLHVCRYC 650
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = +2
Query: 395 QCFKCFKFNHSAKVCRSKQMCSYCAGDHHYKEC 493
QCFK N+ + C+ C G H ++ C
Sbjct: 463 QCFKIINVNNRREALLMGGRCTRCLGKHSFQTC 495
>AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical
protein R52.2 protein.
Length = 1019
Score = 36.3 bits (80), Expect = 0.023
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 398 CFKCFKFNHSAKVCRSKQMCSYCAGDHHYKECVS 499
CF C + H C + C++C G+HH C S
Sbjct: 348 CFGCLRSGHQRSKCSRPRTCNHCKGNHHTVFCQS 381
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 31.5 bits (68), Expect = 0.64
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = +2
Query: 398 CFKCFKFNHSAKVCRSKQM-CSYCAG-DHHYKECVS 499
CF C K+ H A C + Q C+ C +H EC S
Sbjct: 204 CFNCKKYGHRATECSAPQRECANCGDPNHRANECAS 239
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 31.5 bits (68), Expect = 0.64
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = +2
Query: 398 CFKCFKFNHSAKVCRSKQM-CSYCAG-DHHYKECVS 499
CF C K+ H A C + Q C+ C +H EC S
Sbjct: 204 CFNCKKYGHRATECSAPQRECANCGDPNHRANECAS 239
>Z81116-7|CAB03306.1| 669|Caenorhabditis elegans Hypothetical
protein T06C12.8 protein.
Length = 669
Score = 31.1 bits (67), Expect = 0.85
Identities = 19/78 (24%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 167 GVIKFVPTDLSNEDIY-KNISSDAEIISIKRFMKRNADKKLMPMSS-VAITFSTTTLPRY 340
G++ ++ T L N+ + KN + E + + ++ N K P S+ ++ FS L +
Sbjct: 208 GMLVYLCTLLKNDHMSCKNNQEEFEKLLDTKMVEENKAAKPKPTSTTISKIFSYFFLFCF 267
Query: 341 VYLNLFRCEVQTYISPLI 394
+Y+ F C + +++ P+I
Sbjct: 268 LYITFFACHLGSWVKPMI 285
>U41553-1|AAA83291.1| 1250|Caenorhabditis elegans Hypothetical
protein ZK1193.2 protein.
Length = 1250
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = +2
Query: 26 VVSRINASQIGVNFQKAA--DANSFIKLDNFLSKHKFR--AFIPAHLVEKVGVIKFVPTD 193
++ RI ++I +N +++ I LD +S +F +FI A V VPT+
Sbjct: 120 ILQRIEVNKIQINVVQSSLNPCGQDISLDGLISLTQFSGGSFITATTPNAGNVFNQVPTN 179
Query: 194 LSNEDIYKNISSD 232
+ IY+NI+ D
Sbjct: 180 YMSNLIYENIAQD 192
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 29.1 bits (62), Expect = 3.4
Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 4/84 (4%)
Frame = +2
Query: 356 FRCEVQTYISPLIQCFKCFKFNHSAKVCRSKQMCSYCAGDHHYKECVSDILVCIN--CGG 529
FRC ++Q C FN S + S C+ Y +C SD C N C
Sbjct: 4006 FRCAHSRLCLNILQL--CNGFNDCGPNDFSDEHLSMCSSFSEYGDCSSDQFKCANGKCVN 4063
Query: 530 GHLAVSR--DCP*IFTNSCSCSKN 595
G +A R DC ++ CSK+
Sbjct: 4064 GTVACDRKDDCG-DASDEIGCSKH 4086
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 29.1 bits (62), Expect = 3.4
Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 4/84 (4%)
Frame = +2
Query: 356 FRCEVQTYISPLIQCFKCFKFNHSAKVCRSKQMCSYCAGDHHYKECVSDILVCIN--CGG 529
FRC ++Q C FN S + S C+ Y +C SD C N C
Sbjct: 4006 FRCAHSRLCLNILQL--CNGFNDCGPNDFSDEHLSMCSSFSEYGDCSSDQFKCANGKCVN 4063
Query: 530 GHLAVSR--DCP*IFTNSCSCSKN 595
G +A R DC ++ CSK+
Sbjct: 4064 GTVACDRKDDCG-DASDEIGCSKH 4086
>Z83229-1|CAB05738.1| 281|Caenorhabditis elegans Hypothetical
protein F54F11.1 protein.
Length = 281
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/50 (26%), Positives = 28/50 (56%)
Frame = +2
Query: 98 KLDNFLSKHKFRAFIPAHLVEKVGVIKFVPTDLSNEDIYKNISSDAEIIS 247
+++ FLS +KF + P +++ G I F D ++ ++ +NI + I+
Sbjct: 102 QINQFLSNNKFLSDDPLVILQTGGTIDFFGGDTNSTEVVENIQQTIQNIT 151
>Z81476-2|CAB03918.1| 1469|Caenorhabditis elegans Hypothetical
protein C25F9.2 protein.
Length = 1469
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +2
Query: 437 CRSKQMCSYCAGDHHYKECVSDILVCINCGGGHLAVSRDCP*IFTNSCSC-SKNQEC 604
CR C+ A D+HY C + C+NCG D I C+ K+Q+C
Sbjct: 463 CRFCYKCATFANDNHYLYCKAK---CMNCGTNTCEPGNDK--IVCGECNVYFKSQDC 514
>Z68749-7|CAA92962.2| 728|Caenorhabditis elegans Hypothetical
protein F56H11.1c protein.
Length = 728
Score = 28.3 bits (60), Expect = 6.0
Identities = 22/77 (28%), Positives = 30/77 (38%)
Frame = +2
Query: 368 VQTYISPLIQCFKCFKFNHSAKVCRSKQMCSYCAGDHHYKECVSDILVCINCGGGHLAVS 547
+ T S L QC +K + C C+ EC VC+N G S
Sbjct: 535 INTKGSYLCQCPPGYKIQPDGRTCVDVDECAM-------GECAGSDKVCVNTLGSFKCHS 587
Query: 548 RDCP*IFTNSCSCSKNQ 598
DCP + + S +KNQ
Sbjct: 588 IDCPTNYIHD-SLNKNQ 603
>Z68749-6|CAC35818.1| 689|Caenorhabditis elegans Hypothetical
protein F56H11.1b protein.
Length = 689
Score = 28.3 bits (60), Expect = 6.0
Identities = 22/77 (28%), Positives = 30/77 (38%)
Frame = +2
Query: 368 VQTYISPLIQCFKCFKFNHSAKVCRSKQMCSYCAGDHHYKECVSDILVCINCGGGHLAVS 547
+ T S L QC +K + C C+ EC VC+N G S
Sbjct: 496 INTKGSYLCQCPPGYKIQPDGRTCVDVDECAM-------GECAGSDKVCVNTLGSFKCHS 548
Query: 548 RDCP*IFTNSCSCSKNQ 598
DCP + + S +KNQ
Sbjct: 549 IDCPTNYIHD-SLNKNQ 564
>Z68219-9|CAA92483.2| 728|Caenorhabditis elegans Hypothetical
protein F56H11.1c protein.
Length = 728
Score = 28.3 bits (60), Expect = 6.0
Identities = 22/77 (28%), Positives = 30/77 (38%)
Frame = +2
Query: 368 VQTYISPLIQCFKCFKFNHSAKVCRSKQMCSYCAGDHHYKECVSDILVCINCGGGHLAVS 547
+ T S L QC +K + C C+ EC VC+N G S
Sbjct: 535 INTKGSYLCQCPPGYKIQPDGRTCVDVDECAM-------GECAGSDKVCVNTLGSFKCHS 587
Query: 548 RDCP*IFTNSCSCSKNQ 598
DCP + + S +KNQ
Sbjct: 588 IDCPTNYIHD-SLNKNQ 603
>Z68219-7|CAC35827.1| 689|Caenorhabditis elegans Hypothetical
protein F56H11.1b protein.
Length = 689
Score = 28.3 bits (60), Expect = 6.0
Identities = 22/77 (28%), Positives = 30/77 (38%)
Frame = +2
Query: 368 VQTYISPLIQCFKCFKFNHSAKVCRSKQMCSYCAGDHHYKECVSDILVCINCGGGHLAVS 547
+ T S L QC +K + C C+ EC VC+N G S
Sbjct: 496 INTKGSYLCQCPPGYKIQPDGRTCVDVDECAM-------GECAGSDKVCVNTLGSFKCHS 548
Query: 548 RDCP*IFTNSCSCSKNQ 598
DCP + + S +KNQ
Sbjct: 549 IDCPTNYIHD-SLNKNQ 564
>U41031-2|AAA82619.2| 615|Caenorhabditis elegans Hypothetical
protein C16B8.2 protein.
Length = 615
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -3
Query: 634 GLYAHNKDKFAFLVFRTTAAVCKYSWAVPGYS*MSPTT 521
G+ + FA + RTTA V KY W P + +PTT
Sbjct: 254 GMARFVSEDFAKQLQRTTAKVKKYDWFPPTTTATTPTT 291
>AY851363-1|AAW34127.1| 728|Caenorhabditis elegans fibulin-1D
splice variant protein.
Length = 728
Score = 28.3 bits (60), Expect = 6.0
Identities = 22/77 (28%), Positives = 30/77 (38%)
Frame = +2
Query: 368 VQTYISPLIQCFKCFKFNHSAKVCRSKQMCSYCAGDHHYKECVSDILVCINCGGGHLAVS 547
+ T S L QC +K + C C+ EC VC+N G S
Sbjct: 535 INTKGSYLCQCPPGYKIQPDGRTCVDVDECAM-------GECAGSDKVCVNTLGSFKCHS 587
Query: 548 RDCP*IFTNSCSCSKNQ 598
DCP + + S +KNQ
Sbjct: 588 IDCPTNYIHD-SLNKNQ 603
>AF070477-1|AAC24035.1| 589|Caenorhabditis elegans fibulin-1D
precursor protein.
Length = 589
Score = 28.3 bits (60), Expect = 6.0
Identities = 22/77 (28%), Positives = 30/77 (38%)
Frame = +2
Query: 368 VQTYISPLIQCFKCFKFNHSAKVCRSKQMCSYCAGDHHYKECVSDILVCINCGGGHLAVS 547
+ T S L QC +K + C C+ EC VC+N G S
Sbjct: 396 INTKGSYLCQCPPGYKIQPDGRTCVDVDECAM-------GECAGSDKVCVNTLGSFKCHS 448
Query: 548 RDCP*IFTNSCSCSKNQ 598
DCP + + S +KNQ
Sbjct: 449 IDCPTNYIHD-SLNKNQ 464
>AF051403-1|AAC28324.1| 689|Caenorhabditis elegans fibulin-1
isoform D precursor protein.
Length = 689
Score = 28.3 bits (60), Expect = 6.0
Identities = 22/77 (28%), Positives = 30/77 (38%)
Frame = +2
Query: 368 VQTYISPLIQCFKCFKFNHSAKVCRSKQMCSYCAGDHHYKECVSDILVCINCGGGHLAVS 547
+ T S L QC +K + C C+ EC VC+N G S
Sbjct: 496 INTKGSYLCQCPPGYKIQPDGRTCVDVDECAM-------GECAGSDKVCVNTLGSFKCHS 548
Query: 548 RDCP*IFTNSCSCSKNQ 598
DCP + + S +KNQ
Sbjct: 549 IDCPTNYIHD-SLNKNQ 564
>AF051401-1|AAC28321.1| 689|Caenorhabditis elegans fibulin-1
isoform D precursor protein.
Length = 689
Score = 28.3 bits (60), Expect = 6.0
Identities = 22/77 (28%), Positives = 30/77 (38%)
Frame = +2
Query: 368 VQTYISPLIQCFKCFKFNHSAKVCRSKQMCSYCAGDHHYKECVSDILVCINCGGGHLAVS 547
+ T S L QC +K + C C+ EC VC+N G S
Sbjct: 496 INTKGSYLCQCPPGYKIQPDGRTCVDVDECAM-------GECAGSDKVCVNTLGSFKCHS 548
Query: 548 RDCP*IFTNSCSCSKNQ 598
DCP + + S +KNQ
Sbjct: 549 IDCPTNYIHD-SLNKNQ 564
>Z71266-8|CAA95846.2| 729|Caenorhabditis elegans Hypothetical
protein R06C7.9 protein.
Length = 729
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +2
Query: 419 NHSAKVCRSKQMCSYCAGDH-HYKECVSDILVCINCG 526
N S +C SK C DH H + + D+++C CG
Sbjct: 175 NCSCSICGSKFSTIRCLLDHRHQEHSLKDMMMCGLCG 211
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,697,742
Number of Sequences: 27780
Number of extensions: 395423
Number of successful extensions: 959
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 958
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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