Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_N12
         (738 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    27   0.24 
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    27   0.24 
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   3.0  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   5.2  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   5.2  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   5.2  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    22   6.9  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 26.6 bits (56), Expect = 0.24
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 549 GTAHEYLQTAAVVLKTKNANLSLLCAYSP 635
           G AHE   T   V  + +A ++L+C YSP
Sbjct: 730 GNAHETQITTLCVAISLSATVTLVCLYSP 758



 Score = 21.4 bits (43), Expect = 9.1
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +3

Query: 513 VLTVVGDI*LYPGTAHEYLQTAAVVLKTKNANLSLL 620
           VLT+V  I   PGT   Y     V+LK    ++S L
Sbjct: 640 VLTLVWMIIEPPGTRFFYPDRKQVILKCNIQDMSFL 675


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 26.6 bits (56), Expect = 0.24
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 549 GTAHEYLQTAAVVLKTKNANLSLLCAYSP 635
           G AHE   T   V  + +A ++L+C YSP
Sbjct: 820 GNAHETQITTLCVAISLSATVTLVCLYSP 848



 Score = 21.4 bits (43), Expect = 9.1
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +3

Query: 513 VLTVVGDI*LYPGTAHEYLQTAAVVLKTKNANLSLL 620
           VLT+V  I   PGT   Y     V+LK    ++S L
Sbjct: 730 VLTLVWMIIEPPGTRFFYPDRKQVILKCNIQDMSFL 765


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = +2

Query: 248 IKRFMKRNADKKLMPMSSVAITFSTTTLPRYVYLNLFRCEVQTY 379
           I+  ++RN+   L P   V   +  T   RY  L L   + QT+
Sbjct: 113 IETIIRRNSRYPLRPPQEVISHYRRTRRDRYTNLGLVNEQGQTW 156


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 292 YELCGYNFFNNYI 330
           YE+C Y FFN+ +
Sbjct: 163 YEMCPYFFFNSEV 175


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 292 YELCGYNFFNNYI 330
           YE+C Y FFN+ +
Sbjct: 163 YEMCPYFFFNSEV 175


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 12/47 (25%), Positives = 22/47 (46%)
 Frame = +2

Query: 230 DAEIISIKRFMKRNADKKLMPMSSVAITFSTTTLPRYVYLNLFRCEV 370
           D  ++S+KR +  +    +M  S   +T + T L     L ++ C V
Sbjct: 492 DGRVLSVKRELGNDTVIVMMNFSKNPVTVNLTKLHPPADLVVYACNV 538


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = +2

Query: 215 KNISSDAEIISIKRFMKRNADKKLMPMSSVAITFSTT 325
           KN      ++ +KR++    D  + P+SS  I  + T
Sbjct: 36  KNYDHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVT 72


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,180
Number of Sequences: 438
Number of extensions: 4823
Number of successful extensions: 19
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)