Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_N10
         (399 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1050 + 30419673-30419789,30419882-30419977,30420180-304202...    28   3.1  
07_03_0256 - 15875066-15877025,15877292-15877911                       26   9.5  

>04_04_1050 +
           30419673-30419789,30419882-30419977,30420180-30420264,
           30420352-30420386,30420479-30420544,30420646-30420686,
           30420818-30420933,30421101-30421207,30421354-30421491,
           30421610-30421744,30421888-30421998
          Length = 348

 Score = 27.9 bits (59), Expect = 3.1
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -1

Query: 372 DNLCRTFVQPVTRERESTHETDYPLHLWTRIS 277
           D  CR +V+   R RE+   TDY + L T ++
Sbjct: 289 DKDCRPWVEKYQRSRETVSRTDYEVDLITTLT 320


>07_03_0256 - 15875066-15877025,15877292-15877911
          Length = 859

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -1

Query: 315 ETDYPLHLWTRISCELLNL 259
           E D+ LHLWT   C L  L
Sbjct: 674 EDDFSLHLWTLAPCRLRKL 692


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,386,748
Number of Sequences: 37544
Number of extensions: 101866
Number of successful extensions: 154
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 154
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 682720236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)