Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_N05
(623 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061305-1|AAL28853.1| 616|Drosophila melanogaster LD21694p pro... 59 6e-09
AJ620304-1|CAF04333.1| 616|Drosophila melanogaster THO complex ... 59 6e-09
AE013599-3748|AAF47114.2| 616|Drosophila melanogaster CG2980-PA... 59 6e-09
AE014297-471|AAS65115.1| 923|Drosophila melanogaster CG15186-PC... 34 0.18
AE014297-472|AAN13360.2| 1091|Drosophila melanogaster CG15186-PB... 33 0.31
AE014297-470|AAF54118.2| 1072|Drosophila melanogaster CG15186-PA... 33 0.31
AY325814-1|AAP88969.1| 509|Drosophila melanogaster traffic jam ... 29 5.1
AE014134-3104|AAF53804.2| 509|Drosophila melanogaster CG10034-P... 29 5.1
>AY061305-1|AAL28853.1| 616|Drosophila melanogaster LD21694p
protein.
Length = 616
Score = 58.8 bits (136), Expect = 6e-09
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 3/179 (1%)
Frame = -2
Query: 583 EIGRPYVWAQRMCGIDFMTSELNEQSVRRAVEPCPNLSVATVENFIMTLKKRLKCRVKLM 404
+ G+P+ W Q MC I + S + + NL+ E I + +RL +L
Sbjct: 376 DYGKPFCWLQSMCSIATVNSSMLYKHEL-------NLNKNNKE-IIDRIARRLNSWQRLS 427
Query: 403 HELQDLESGKISPPKGSLPPSMRLAG---SLTQWQSVGWPEYSQAPSTAFLVTEGLVSAN 233
+++ L I SL ++ AG SL QW ++ E S A +
Sbjct: 428 QQIRGLTFKDID--LYSLQENIYPAGLSCSLVQWTAITHEELHSQISDALNSSSADKGIT 485
Query: 232 DLLYRAIITRQSAKLVALVALRSDYPKSVPIFSLTLHWNGTHHAGINDDIRDIERVVNT 56
YRA+I R SAK+ + + S+YP +P++ L +HWNG A N I+ +E N+
Sbjct: 486 YNSYRAVIVRGSAKMECFIRIPSNYPLEMPLWILNVHWNGCLTAQNNSAIKMMEFWTNS 544
>AJ620304-1|CAF04333.1| 616|Drosophila melanogaster THO complex 5
protein.
Length = 616
Score = 58.8 bits (136), Expect = 6e-09
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 3/179 (1%)
Frame = -2
Query: 583 EIGRPYVWAQRMCGIDFMTSELNEQSVRRAVEPCPNLSVATVENFIMTLKKRLKCRVKLM 404
+ G+P+ W Q MC I + S + + NL+ E I + +RL +L
Sbjct: 376 DYGKPFCWLQSMCSIATVNSSMLYKHEL-------NLNKNNKE-IIDRIARRLNSWQRLS 427
Query: 403 HELQDLESGKISPPKGSLPPSMRLAG---SLTQWQSVGWPEYSQAPSTAFLVTEGLVSAN 233
+++ L I SL ++ AG SL QW ++ E S A +
Sbjct: 428 QQIRGLTFKDID--LYSLQENIYPAGLSCSLVQWTAITHEELHSQISDALNSSSADKGIT 485
Query: 232 DLLYRAIITRQSAKLVALVALRSDYPKSVPIFSLTLHWNGTHHAGINDDIRDIERVVNT 56
YRA+I R SAK+ + + S+YP +P++ L +HWNG A N I+ +E N+
Sbjct: 486 YNSYRAVIVRGSAKMECFIRIPSNYPLEMPLWILNVHWNGCLTAQNNSAIKMMEFWTNS 544
>AE013599-3748|AAF47114.2| 616|Drosophila melanogaster CG2980-PA
protein.
Length = 616
Score = 58.8 bits (136), Expect = 6e-09
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 3/179 (1%)
Frame = -2
Query: 583 EIGRPYVWAQRMCGIDFMTSELNEQSVRRAVEPCPNLSVATVENFIMTLKKRLKCRVKLM 404
+ G+P+ W Q MC I + S + + NL+ E I + +RL +L
Sbjct: 376 DYGKPFCWLQSMCSIATVNSSMLYKHEL-------NLNKNNKE-IIDRIARRLNSWQRLS 427
Query: 403 HELQDLESGKISPPKGSLPPSMRLAG---SLTQWQSVGWPEYSQAPSTAFLVTEGLVSAN 233
+++ L I SL ++ AG SL QW ++ E S A +
Sbjct: 428 QQIRGLTFKDID--LYSLQENIYPAGLSCSLVQWTAITHEELHSQISDALNSSSADKGIT 485
Query: 232 DLLYRAIITRQSAKLVALVALRSDYPKSVPIFSLTLHWNGTHHAGINDDIRDIERVVNT 56
YRA+I R SAK+ + + S+YP +P++ L +HWNG A N I+ +E N+
Sbjct: 486 YNSYRAVIVRGSAKMECFIRIPSNYPLEMPLWILNVHWNGCLTAQNNSAIKMMEFWTNS 544
>AE014297-471|AAS65115.1| 923|Drosophila melanogaster CG15186-PC,
isoform C protein.
Length = 923
Score = 33.9 bits (74), Expect = 0.18
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = -2
Query: 457 ENFIMTLKKRLKCRVKLMHELQDLESGKISPPKGSLPPSMRLAGSLTQWQSVGWPEYSQ- 281
++F +K RLK KL ++ QDLE + P GS PP +R + ++ P Q
Sbjct: 367 KHFFAPIKPRLKLNTKLANQGQDLEQDDL--PPGSPPPPLRDPPDIFVNNALASPYQRQV 424
Query: 280 APSTAFLVTEGLVSANDLLYRAIITRQSAK 191
+P T + E +++ + + I+ Q K
Sbjct: 425 SPQTDSVNLESILNDIETISEDILAIQLEK 454
>AE014297-472|AAN13360.2| 1091|Drosophila melanogaster CG15186-PB,
isoform B protein.
Length = 1091
Score = 33.1 bits (72), Expect = 0.31
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = -2
Query: 457 ENFIMTLKKRLKCRVKLMHELQDLESGKISPPKGSLPPSMR 335
++F +K RLK KL ++ QDLE + P GS PP +R
Sbjct: 386 KHFFAPIKPRLKLNTKLANQGQDLEQDDL--PPGSPPPPLR 424
>AE014297-470|AAF54118.2| 1072|Drosophila melanogaster CG15186-PA,
isoform A protein.
Length = 1072
Score = 33.1 bits (72), Expect = 0.31
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = -2
Query: 457 ENFIMTLKKRLKCRVKLMHELQDLESGKISPPKGSLPPSMR 335
++F +K RLK KL ++ QDLE + P GS PP +R
Sbjct: 367 KHFFAPIKPRLKLNTKLANQGQDLEQDDL--PPGSPPPPLR 405
>AY325814-1|AAP88969.1| 509|Drosophila melanogaster traffic jam
protein.
Length = 509
Score = 29.1 bits (62), Expect = 5.1
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = -2
Query: 547 CGIDFMTSELNEQSVRRAVEPCPNLSVATVENFIMTLKKR---LKCRVKLMHELQDLE 383
C D M + L + + + + CP V ++ TLK R CR K +H+ +LE
Sbjct: 394 CLNDDMLTTLTVRELNKRLHGCPREEVVRLKQKRRTLKNRGYAQNCRSKRLHQRHELE 451
>AE014134-3104|AAF53804.2| 509|Drosophila melanogaster CG10034-PA
protein.
Length = 509
Score = 29.1 bits (62), Expect = 5.1
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = -2
Query: 547 CGIDFMTSELNEQSVRRAVEPCPNLSVATVENFIMTLKKR---LKCRVKLMHELQDLE 383
C D M + L + + + + CP V ++ TLK R CR K +H+ +LE
Sbjct: 394 CLNDDMLTTLTVRELNKRLHGCPREEVVRLKQKRRTLKNRGYAQNCRSKRLHQRHELE 451
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,687,063
Number of Sequences: 53049
Number of extensions: 493688
Number of successful extensions: 1340
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1340
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2579793750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -