Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_N01
         (806 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    28   0.29 
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    25   3.6  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    24   4.8  
AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.       24   4.8  
AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.       24   4.8  
AY028784-1|AAK32958.2|  499|Anopheles gambiae cytochrome P450 pr...    24   6.3  

>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1209

 Score = 28.3 bits (60), Expect = 0.29
 Identities = 15/25 (60%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
 Frame = +2

Query: 170  VQQFLSFRHGL--RFLVCGRLLPDP 238
            V Q L+ RH L  RFL C R LPDP
Sbjct: 1053 VHQQLALRHKLVERFLPCYRYLPDP 1077


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -1

Query: 434 PGAG*EHRRRRPGVRK 387
           PGA   HRRRRP  R+
Sbjct: 327 PGAAERHRRRRPPPRR 342


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = -2

Query: 688 RVRQVDPQIASMNKGDCFVLDLDNDIYVFVGEKAKNVEK 572
           R ++ +PQI      D F  D D+D    VG++ ++ E+
Sbjct: 309 RSKKTNPQIVEYEFDDDFPFDDDSDFDDDVGDRLESEEE 347


>AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = -2

Query: 688 RVRQVDPQIASMNKGDCFVLDLDNDIYVFVGEKAKNVEK 572
           R ++ +PQI      D F  D D+D    VG++ ++ E+
Sbjct: 79  RSKKTNPQIVEYEFDDDFPFDDDSDFDDDVGDRLESEEE 117


>AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = -2

Query: 688 RVRQVDPQIASMNKGDCFVLDLDNDIYVFVGEKAKNVEK 572
           R ++ +PQI      D F  D D+D    VG++ ++ E+
Sbjct: 79  RSKKTNPQIVEYEFDDDFPFDDDSDFDDDVGDRLESEEE 117


>AY028784-1|AAK32958.2|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = -2

Query: 643 DCFVLDLDNDIYVFVGEKAKNVEKLKAIS--FANQVRDQ 533
           DC  L+  N  +  +G++  N+ KLKA+   FA   R Q
Sbjct: 193 DCNSLENPNSQFRVMGKRMINLPKLKALKVFFAMMFRKQ 231


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 731,663
Number of Sequences: 2352
Number of extensions: 13189
Number of successful extensions: 33
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85239615
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)