Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_M20
         (698 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93383-6|CAB07623.1|  283|Caenorhabditis elegans Hypothetical pr...    33   0.15 
Z81039-3|CAB02775.1|  325|Caenorhabditis elegans Hypothetical pr...    28   5.6  
U29244-18|AAC71099.2|  515|Caenorhabditis elegans Hypothetical p...    28   5.6  
AL023856-1|CAA19566.1|  327|Caenorhabditis elegans Hypothetical ...    28   5.6  
AL132876-17|CAC48140.1|  934|Caenorhabditis elegans Hypothetical...    27   9.8  

>Z93383-6|CAB07623.1|  283|Caenorhabditis elegans Hypothetical
           protein F54B8.6 protein.
          Length = 283

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 21/54 (38%), Positives = 27/54 (50%)
 Frame = -1

Query: 482 CSLLITKKSSNTIFEILFFIPAFLIINMRLIVKVLFFIYGDRREYLLPNSVFIL 321
           CS  I  K S +IF   FFI  FL +++  I K  F +     EY + N  FIL
Sbjct: 32  CSKKIIFKPSLSIFYCRFFIDVFLTLSVS-INKTYFLLISISNEYAVKNLAFIL 84


>Z81039-3|CAB02775.1|  325|Caenorhabditis elegans Hypothetical
           protein C25D7.4 protein.
          Length = 325

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +2

Query: 41  NIRKCDIVNSKFNLIP-IKLLNVLVNSV*FKFCWVHY 148
           N RK +I    F +   +K+ N+L+NS  F +C + Y
Sbjct: 235 NFRKFEINLETFTVADAVKIKNILLNSANFNYCKIEY 271


>U29244-18|AAC71099.2|  515|Caenorhabditis elegans Hypothetical
           protein ZK1248.1 protein.
          Length = 515

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = +3

Query: 414 ECRDKKQNFKYCVTTFFCNQ 473
           E  DKKQ F Y    FFCNQ
Sbjct: 427 EALDKKQLFFYGAAVFFCNQ 446


>AL023856-1|CAA19566.1|  327|Caenorhabditis elegans Hypothetical
           protein Y94A7B.4 protein.
          Length = 327

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
 Frame = -1

Query: 452 NTIFEILFFIPAFLII--NMRLIVKVLFFIYGDRREYLL-PNSVFIL 321
           N +F I +FIP FL +  +     ++LF +Y D  EY+   N VF++
Sbjct: 137 NYLFGITYFIPIFLNVPSDQENARRILFNMYPDACEYVSDKNLVFVV 183


>AL132876-17|CAC48140.1|  934|Caenorhabditis elegans Hypothetical
           protein Y105E8A.21 protein.
          Length = 934

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +1

Query: 412 KNAGIKNKISNIVLLLFFVIRSEHIRFP 495
           KNAG +    N ++  FF+ +S+H  FP
Sbjct: 706 KNAGSRVHTDNRIVRSFFMFQSDHTAFP 733


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,430,779
Number of Sequences: 27780
Number of extensions: 279999
Number of successful extensions: 587
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 587
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)