Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_M16
(629 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase su... 386 e-108
AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical ... 75 4e-14
AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily a... 73 1e-13
U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpa... 69 2e-12
AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical ... 39 0.003
AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical ... 39 0.003
AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical ... 39 0.003
Z82288-5|CAB05324.1| 380|Caenorhabditis elegans Hypothetical pr... 29 2.1
AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical ... 29 2.1
Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical pr... 29 2.7
U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical pr... 29 3.6
U23513-1|ABD94110.1| 294|Caenorhabditis elegans Hypothetical pr... 29 3.6
U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical pr... 28 6.3
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 28 6.3
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z50797-5|CAA90675.1| 342|Caenorhabditis elegans Hypothetical pr... 27 8.4
>U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase
subunit protein 2 protein.
Length = 538
Score = 386 bits (951), Expect = e-108
Identities = 187/208 (89%), Positives = 197/208 (94%)
Frame = -3
Query: 624 EYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTK 445
EYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMG+MQERITTTK
Sbjct: 300 EYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERITTTK 359
Query: 444 KGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDP 265
KGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSR IAEL IYPAVDPLDSTSRIMDP
Sbjct: 360 KGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELAIYPAVDPLDSTSRIMDP 419
Query: 264 NIIGAEHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQV 85
N++G HY++ARGVQKILQDYKSLQDIIAILGMDELSEEDKLTV+RARKIQRFLSQPFQV
Sbjct: 420 NVVGQNHYDIARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFLSQPFQV 479
Query: 84 AEVFTGHAGKLVPLEETIKGCSKMXAGD 1
AEVFTGH GK V LEETI+G + + G+
Sbjct: 480 AEVFTGHQGKFVSLEETIRGFTMILKGE 507
>AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical
protein Y49A3A.2 protein.
Length = 606
Score = 74.9 bits (176), Expect = 4e-14
Identities = 57/191 (29%), Positives = 95/191 (49%), Gaps = 15/191 (7%)
Frame = -3
Query: 624 EYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTK 445
EYFRD G +V + D+ R+ +A E+S LG +P+ GY LA + + ER K
Sbjct: 324 EYFRDM-GLNVAMMADSTSRWAEALREISGRLGEMPADSGYPAYLAARLASFYERAGRVK 382
Query: 444 -------KGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDS 286
+GS+T V A+ P D DP + T + L + +A+ +P+++ L S
Sbjct: 383 CLGSPEREGSVTIVGAVSPPGGDFADPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLIS 442
Query: 285 TSRIM-------DPNIIGAEHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVAR 127
S M + N E ++ ++ILQ+ + L +I+ ++G L+E DK+T+
Sbjct: 443 YSEYMRALEEFYEKNY--PEFVSLRTKCKEILQEEEDLSEIVQLVGKASLAESDKVTLEV 500
Query: 126 ARKIQ-RFLSQ 97
A+ I+ FL Q
Sbjct: 501 AKIIKDDFLQQ 511
>AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily
assigned gene nameprotein 300 protein.
Length = 501
Score = 73.3 bits (172), Expect = 1e-13
Identities = 48/183 (26%), Positives = 93/183 (50%), Gaps = 7/183 (3%)
Frame = -3
Query: 624 EYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTK 445
E+F G+ VL+ + ++ + +A E+SA +P G+ + TD+ T+ ER K
Sbjct: 275 EFFAYHCGKHVLVVLTDMSSYAEALREISAAREEVPGRRGFPGYMYTDLATIYERAGRVK 334
Query: 444 --KGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIM 271
+GSIT + + +P +D+T P P T + + + + + IYP +D L S SR+M
Sbjct: 335 GREGSITQIPILTMPNNDITHPIPDLTGYITEGQIYIDKQLHKRLIYPPIDVLPSLSRLM 394
Query: 270 ----DPNIIGAEHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQR-F 106
+ +H +++ + K +Q + A++G++ LS +D L + K ++ F
Sbjct: 395 KSAVGEGMTREDHSDLSNQLYACYAMGKDVQAMKAVVGVEALSPDDLLYLEFLAKFEKNF 454
Query: 105 LSQ 97
++Q
Sbjct: 455 IAQ 457
>U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpase
protein 12 protein.
Length = 491
Score = 69.3 bits (162), Expect = 2e-12
Identities = 50/183 (27%), Positives = 89/183 (48%), Gaps = 7/183 (3%)
Frame = -3
Query: 624 EYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTT- 448
E+ Q + VL+ + ++ + +A EVSA +P G+ + TD+ T+ ER
Sbjct: 263 EFLAYQCKKHVLVVLTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVE 322
Query: 447 -KKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIM 271
+ GSIT + + +P DD+T P P T + + R + IYP ++ L S SR+M
Sbjct: 323 GRDGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRLIYPPINVLPSLSRLM 382
Query: 270 DPNI----IGAEHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQR-F 106
I +H +V+ + K +Q + A++G + LS +D L + K ++ F
Sbjct: 383 KSAIGEGMTREDHSDVSNQLYACYAIGKDVQAMKAVVGEEALSSDDLLYLEFLTKFEKNF 442
Query: 105 LSQ 97
++Q
Sbjct: 443 ITQ 445
>AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical
protein H28O16.1d protein.
Length = 511
Score = 39.1 bits (87), Expect = 0.003
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 4/121 (3%)
Frame = -3
Query: 624 EYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTK 445
E+FRD G+ L+ D++ + A ++S LL R P Y + + ER
Sbjct: 256 EHFRDN-GKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMN 314
Query: 444 K----GSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSR 277
GS+T++ I A D++ P + D L + G+ PA++ S SR
Sbjct: 315 NSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAINVGLSVSR 374
Query: 276 I 274
+
Sbjct: 375 V 375
>AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical
protein H28O16.1c protein.
Length = 503
Score = 39.1 bits (87), Expect = 0.003
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 4/121 (3%)
Frame = -3
Query: 624 EYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTK 445
E+FRD G+ L+ D++ + A ++S LL R P Y + + ER
Sbjct: 248 EHFRDN-GKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMN 306
Query: 444 K----GSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSR 277
GS+T++ I A D++ P + D L + G+ PA++ S SR
Sbjct: 307 NSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAINVGLSVSR 366
Query: 276 I 274
+
Sbjct: 367 V 367
>AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical
protein H28O16.1a protein.
Length = 538
Score = 39.1 bits (87), Expect = 0.003
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 4/121 (3%)
Frame = -3
Query: 624 EYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTK 445
E+FRD G+ L+ D++ + A ++S LL R P Y + + ER
Sbjct: 283 EHFRDN-GKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMN 341
Query: 444 K----GSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSR 277
GS+T++ I A D++ P + D L + G+ PA++ S SR
Sbjct: 342 NSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAINVGLSVSR 401
Query: 276 I 274
+
Sbjct: 402 V 402
>Z82288-5|CAB05324.1| 380|Caenorhabditis elegans Hypothetical
protein ZK896.7 protein.
Length = 380
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = -3
Query: 504 YQPTLATDMG--TMQERITTTKKGSITSVQ-AIYVPADDLTDPAPATTFAHLDATTV 343
Y PT T T+ TTT+ + T+V+ A +T P P TT + TTV
Sbjct: 146 YDPTATTSAAPTTIPPTTTTTRAPTTTTVRKTTQTTATTMTTPKPTTTVSTTTTTTV 202
>AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical
protein T06A4.1b protein.
Length = 606
Score = 29.5 bits (63), Expect = 2.1
Identities = 26/112 (23%), Positives = 45/112 (40%)
Frame = -3
Query: 486 TDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYP 307
T+ T +E TTT + T+ P + T+P+P T A +TT + +E
Sbjct: 482 TEAPTTEEPTTTTTEEPTTTTTT-EEPTEAPTEPSPTTVEATEASTTPEASTSSETSTTE 540
Query: 306 AVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAILGMDELSE 151
+P TS + P E + DY L ++ + D++S+
Sbjct: 541 NSEPNQKTSTPVAPEASTVEEETITPIKCVDYGDYCRLWGVLQLCYRDQVSK 592
>Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical
protein W04G5.9 protein.
Length = 405
Score = 29.1 bits (62), Expect = 2.7
Identities = 21/77 (27%), Positives = 32/77 (41%)
Frame = -3
Query: 495 TLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELG 316
T+AT + TTTK + T++ + T P P TT + TT +R IA
Sbjct: 173 TVATTKTSPSTLRTTTKPPTTTTIATTRITTKTTTSPPPFTT--TVTTTTSAARTIATTT 230
Query: 315 IYPAVDPLDSTSRIMDP 265
V P+ + + P
Sbjct: 231 PIKTVPPVKVFGKAIKP 247
>U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical
protein F25E2.2 protein.
Length = 624
Score = 28.7 bits (61), Expect = 3.6
Identities = 18/60 (30%), Positives = 23/60 (38%)
Frame = -3
Query: 498 PTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAEL 319
PT T T + TTT + + P T PAP TT TT+ + A L
Sbjct: 419 PTTTTTTTTTPKPTTTTTTTTTPAPTTTQKPTTTTTTPAPTTTSTTSIPTTIATTTAAPL 478
>U23513-1|ABD94110.1| 294|Caenorhabditis elegans Hypothetical
protein D2021.4a protein.
Length = 294
Score = 28.7 bits (61), Expect = 3.6
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = -3
Query: 282 SRIMDPNIIGAEHYN-VARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRF 106
++I D N+I + HYN V+ G + L D K ++ + + D E K+ +A + +F
Sbjct: 56 NKIKDENVIFSMHYNFVSAGDPRKLIDIK-IEKVGNVYTADVYHENKKIGLAHIKTDSKF 114
Query: 105 LSQ-PF 91
L + PF
Sbjct: 115 LRKIPF 120
>U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical
protein T10F2.4 protein.
Length = 492
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 412 INSL-YRCDGTFLGGGNSFLHSTHVSSQSRLISYS 513
INSL + GTFLG G + HV S S ++S S
Sbjct: 426 INSLSFDMTGTFLGIGGQKVQVLHVKSWSEVVSLS 460
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 27.9 bits (59), Expect = 6.3
Identities = 22/80 (27%), Positives = 39/80 (48%)
Frame = -3
Query: 543 VSALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFA 364
VS+ ++P QPT+++++G + + T K+ +I V+ P+ P T
Sbjct: 1332 VSSFAPKVPETKINQPTISSNIGDLSK---TEKESTIPRVEV--TPS---ASPESTTVTE 1383
Query: 363 HLDATTVLSRAIAELGIYPA 304
H+DA T S I +G P+
Sbjct: 1384 HIDAET-NSATIPTIGTPPS 1402
>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
protein C34F6.1 protein.
Length = 1043
Score = 27.5 bits (58), Expect = 8.4
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -2
Query: 220 ENSSGLQIPAGHYCYFG 170
ENS+G + AGH+C+ G
Sbjct: 424 ENSNGTECSAGHWCHIG 440
>Z50797-5|CAA90675.1| 342|Caenorhabditis elegans Hypothetical
protein T22H6.4 protein.
Length = 342
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 360 LDATTVLSRAIAELGIYPAVDPLDSTSRIMD 268
+D ++ A LGIYPA+DP+ + I D
Sbjct: 275 IDVGVAANKTAAFLGIYPALDPMIAIFLIKD 305
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,108,121
Number of Sequences: 27780
Number of extensions: 333588
Number of successful extensions: 987
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 983
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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