Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_M15
         (487 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0682 + 24251861-24251911,24252036-24252086,24255244-242553...    31   0.37 
06_01_0311 - 2243117-2243185,2243321-2243400,2243554-2243620,224...    31   0.49 
05_01_0384 + 2997465-2999777,2999960-3000035,3003027-3003102,300...    30   0.86 
04_04_0201 - 23555336-23556008,23556097-23556258,23556353-235572...    29   2.6  
07_03_0923 - 22617627-22617860,22618486-22618542,22618612-226187...    28   4.6  
08_01_0406 + 3607088-3607231,3608900-3608996,3609121-3609185,361...    27   6.0  
06_02_0247 - 13465763-13466227                                         27   6.0  
08_02_1435 + 27079184-27082006                                         27   8.0  

>01_05_0682 +
           24251861-24251911,24252036-24252086,24255244-24255310,
           24255405-24255484,24255631-24255696
          Length = 104

 Score = 31.5 bits (68), Expect = 0.37
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -1

Query: 166 ERVVWCDGGSGPEGHPRVYINLXKPGDHACGXC 68
           +R+V C GG G + H  V+  L K   H C  C
Sbjct: 46  KRIVGCPGGEGEDEHDVVWFWLKKDEPHECPVC 78


>06_01_0311 -
           2243117-2243185,2243321-2243400,2243554-2243620,
           2245176-2245226,2245317-2245402,2245501-2245612
          Length = 154

 Score = 31.1 bits (67), Expect = 0.49
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -1

Query: 166 ERVVWCDGGSGPEGHPRVYINLXKPGDHACGXC 68
           +R+V C GG G + H  V+  L K   H C  C
Sbjct: 95  KRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVC 127


>05_01_0384 +
           2997465-2999777,2999960-3000035,3003027-3003102,
           3003571-3004442,3004592-3004773,3005206-3005295,
           3005388-3005675,3005776-3005997,3006053-3006133,
           3006634-3006861
          Length = 1475

 Score = 30.3 bits (65), Expect = 0.86
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -1

Query: 205 VNLIAEIPPKEVTERVVWCDGGSG 134
           V ++  + PK+ T RV W DGG G
Sbjct: 434 VGVVRRVDPKDQTVRVSWLDGGDG 457


>04_04_0201 - 23555336-23556008,23556097-23556258,23556353-23557206,
            23557452-23557613,23558197-23558649,23559729-23559788,
            23559983-23560058,23561546-23561593,23561948-23562022,
            23562067-23562494
          Length = 996

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 9/58 (15%)
 Frame = +3

Query: 42   PVFFLHLXPQXPH---------AWSPGXSKLIYTRG*PSGPLPPSHQTTLSVTSLGGI 188
            P F LHL P  P           +S G +     RG P  P PP   + L+V  LGG+
Sbjct: 869  PHFGLHLPPPPPRDPLAPMSNFPYSLGHAPSPALRGLPPPPPPPPSASALAVAGLGGV 926


>07_03_0923 -
           22617627-22617860,22618486-22618542,22618612-22618768,
           22618875-22619014,22619642-22619777,22619874-22620142,
           22620272-22620492,22620648-22620707,22620859-22620915,
           22621008-22621405,22621929-22622000,22622098-22622169,
           22622246-22622317,22622574-22622645,22622738-22622867,
           22623065-22623170
          Length = 750

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = +3

Query: 57  HLXPQXPHAWSP--GXSKLIYTRG*PSGPLPPSHQTTLSVTSL 179
           HL  + P A+S   G + L ++    +GPLPPS     ++TSL
Sbjct: 133 HLSGEIPDAFSTLTGLANLDFSSNNLTGPLPPSMGNLTALTSL 175


>08_01_0406 +
           3607088-3607231,3608900-3608996,3609121-3609185,
           3610268-3610372,3610492-3610554,3610801-3610834,
           3610921-3611043,3611269-3611362,3611452-3611497,
           3611692-3611759,3611843-3611891,3612032-3612097,
           3612443-3612475
          Length = 328

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 8/60 (13%)
 Frame = -1

Query: 205 VNLIAEIPPKEVTERVVWCDG------GSGPEGHPRVYI--NLXKPGDHACGXCGXRCRK 50
           + LI  +PP +V  R+  CDG       +G  GHP  YI  +L +P   A    G   +K
Sbjct: 56  MELINAVPPIKVEGRIAACDGRQDKGRETGSLGHPIEYICLDLDQPASGAAMAPGPEKKK 115


>06_02_0247 - 13465763-13466227
          Length = 154

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 169 TERVVWCDGGSGPEGHPRV 113
           +ER +WC GG G +G   V
Sbjct: 93  SERRIWCGGGGGDDGEEEV 111


>08_02_1435 + 27079184-27082006
          Length = 940

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 91  GDHACGXCGXRCRKKTGH 38
           G++ C   G  C KKTGH
Sbjct: 54  GENCCSWSGVSCSKKTGH 71


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,868,924
Number of Sequences: 37544
Number of extensions: 227738
Number of successful extensions: 509
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 509
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 999806640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)