Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_M15
(487 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456880-1|CAG33161.1| 124|Homo sapiens NDUFS6 protein. 95 2e-19
BC046155-1|AAH46155.1| 124|Homo sapiens NADH dehydrogenase (ubi... 95 2e-19
BC038664-1|AAH38664.1| 124|Homo sapiens NADH dehydrogenase (ubi... 95 2e-19
AF044959-1|AAC27799.1| 124|Homo sapiens NADH:ubiquinone oxidore... 95 2e-19
BC028218-1|AAH28218.1| 149|Homo sapiens ZBP1 protein protein. 31 1.6
AY673640-1|AAV85766.1| 684|Homo sapiens cirhin interaction prot... 31 2.2
Z98050-1|CAI21070.1| 2717|Homo sapiens human immunodeficiency vi... 29 6.6
AL391828-1|CAH73909.1| 2717|Homo sapiens human immunodeficiency ... 29 6.6
AL157373-1|CAH73982.1| 2717|Homo sapiens human immunodeficiency ... 29 6.6
AL137221-1|CAI14768.1| 2717|Homo sapiens human immunodeficiency ... 29 6.6
>CR456880-1|CAG33161.1| 124|Homo sapiens NDUFS6 protein.
Length = 124
Score = 94.7 bits (225), Expect = 2e-19
Identities = 44/82 (53%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Frame = -1
Query: 292 THTGQKWDSDDYRLVRFTNAPKQVNPNWAVNLIAEIPPKEVTERVVWCDGGSGPEGHPRV 113
THTGQ +D DYR +RF K+VN N+A++LIAE P EV RV+ CDGG G GHP+V
Sbjct: 40 THTGQVYDDKDYRRIRFVGRQKEVNENFAIDLIAEQPVSEVETRVIACDGGGGALGHPKV 99
Query: 112 YINLXK-PGDHACGXCGXRCRK 50
YINL K CG CG + R+
Sbjct: 100 YINLDKETKTGTCGYCGLQFRQ 121
>BC046155-1|AAH46155.1| 124|Homo sapiens NADH dehydrogenase
(ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q
reductas protein.
Length = 124
Score = 94.7 bits (225), Expect = 2e-19
Identities = 44/82 (53%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Frame = -1
Query: 292 THTGQKWDSDDYRLVRFTNAPKQVNPNWAVNLIAEIPPKEVTERVVWCDGGSGPEGHPRV 113
THTGQ +D DYR +RF K+VN N+A++LIAE P EV RV+ CDGG G GHP+V
Sbjct: 40 THTGQVYDDKDYRRIRFVGRQKEVNENFAIDLIAEQPVSEVETRVIACDGGGGALGHPKV 99
Query: 112 YINLXK-PGDHACGXCGXRCRK 50
YINL K CG CG + R+
Sbjct: 100 YINLDKETKTGTCGYCGLQFRQ 121
>BC038664-1|AAH38664.1| 124|Homo sapiens NADH dehydrogenase
(ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q
reductas protein.
Length = 124
Score = 94.7 bits (225), Expect = 2e-19
Identities = 44/82 (53%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Frame = -1
Query: 292 THTGQKWDSDDYRLVRFTNAPKQVNPNWAVNLIAEIPPKEVTERVVWCDGGSGPEGHPRV 113
THTGQ +D DYR +RF K+VN N+A++LIAE P EV RV+ CDGG G GHP+V
Sbjct: 40 THTGQVYDDKDYRRIRFVGRQKEVNENFAIDLIAEQPVSEVETRVIACDGGGGALGHPKV 99
Query: 112 YINLXK-PGDHACGXCGXRCRK 50
YINL K CG CG + R+
Sbjct: 100 YINLDKETKTGTCGYCGLQFRQ 121
>AF044959-1|AAC27799.1| 124|Homo sapiens NADH:ubiquinone
oxidoreductase NDUFS6 subunit protein.
Length = 124
Score = 94.7 bits (225), Expect = 2e-19
Identities = 44/82 (53%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Frame = -1
Query: 292 THTGQKWDSDDYRLVRFTNAPKQVNPNWAVNLIAEIPPKEVTERVVWCDGGSGPEGHPRV 113
THTGQ +D DYR +RF K+VN N+A++LIAE P EV RV+ CDGG G GHP+V
Sbjct: 40 THTGQVYDDKDYRRIRFVGRQKEVNENFAIDLIAEQPVSEVETRVIACDGGGGALGHPKV 99
Query: 112 YINLXK-PGDHACGXCGXRCRK 50
YINL K CG CG + R+
Sbjct: 100 YINLDKETKTGTCGYCGLQFRQ 121
>BC028218-1|AAH28218.1| 149|Homo sapiens ZBP1 protein protein.
Length = 149
Score = 31.5 bits (68), Expect = 1.6
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = -1
Query: 256 RLVRFTNAPKQVNPNWAVNLIAEIPPKEVTERVVWCDGGSGPEGHPRVYINLXKPGDHAC 77
+LV+ APK+ + E+ +T WC GG+ PEG + L PG+
Sbjct: 33 QLVKECQAPKRELNQVLYRMKKELKVS-LTSPATWCLGGTDPEGEGPAELALSSPGNCHP 91
Query: 76 GXCG 65
G G
Sbjct: 92 GEAG 95
>AY673640-1|AAV85766.1| 684|Homo sapiens cirhin interaction protein
protein.
Length = 684
Score = 31.1 bits (67), Expect = 2.2
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -1
Query: 178 KEVTERVVWCDGGSGPEGHPRVYINLXKPGDHACGXCGXRCRK 50
K R+ CDGG VY+ G + C CG RC+K
Sbjct: 24 KSEPRRIKICDGGY-KSNEEYVYVRGRGRGKYICEECGIRCKK 65
>Z98050-1|CAI21070.1| 2717|Homo sapiens human immunodeficiency virus
type I enhancer binding protein 1 protein.
Length = 2717
Score = 29.5 bits (63), Expect = 6.6
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -1
Query: 178 KEVTERVVWCDGGSGPEGHPRVYINLXKPGDHACGXCGXRCRK 50
K R+ DGG E + VY+ G + C CG RC+K
Sbjct: 2058 KSEPRRIKIFDGGQSNEEY--VYVRGRGRGKYICEECGIRCKK 2098
>AL391828-1|CAH73909.1| 2717|Homo sapiens human immunodeficiency virus
type I enhancer binding protein 1 protein.
Length = 2717
Score = 29.5 bits (63), Expect = 6.6
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -1
Query: 178 KEVTERVVWCDGGSGPEGHPRVYINLXKPGDHACGXCGXRCRK 50
K R+ DGG E + VY+ G + C CG RC+K
Sbjct: 2058 KSEPRRIKIFDGGQSNEEY--VYVRGRGRGKYICEECGIRCKK 2098
>AL157373-1|CAH73982.1| 2717|Homo sapiens human immunodeficiency virus
type I enhancer binding protein 1 protein.
Length = 2717
Score = 29.5 bits (63), Expect = 6.6
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -1
Query: 178 KEVTERVVWCDGGSGPEGHPRVYINLXKPGDHACGXCGXRCRK 50
K R+ DGG E + VY+ G + C CG RC+K
Sbjct: 2058 KSEPRRIKIFDGGQSNEEY--VYVRGRGRGKYICEECGIRCKK 2098
>AL137221-1|CAI14768.1| 2717|Homo sapiens human immunodeficiency virus
type I enhancer binding protein 1 protein.
Length = 2717
Score = 29.5 bits (63), Expect = 6.6
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -1
Query: 178 KEVTERVVWCDGGSGPEGHPRVYINLXKPGDHACGXCGXRCRK 50
K R+ DGG E + VY+ G + C CG RC+K
Sbjct: 2058 KSEPRRIKIFDGGQSNEEY--VYVRGRGRGKYICEECGIRCKK 2098
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,106,425
Number of Sequences: 237096
Number of extensions: 1387738
Number of successful extensions: 6436
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6436
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4384610846
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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