Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_M14
(699 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 205 4e-54
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 161 7e-41
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 155 4e-39
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 146 4e-36
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 128 8e-31
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 111 1e-25
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 101 1e-22
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 76 4e-15
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 60 4e-10
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 29 0.48
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 29 0.48
SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces pom... 26 6.0
SPAC1F7.03 |pkd2||TRP-like ion channel |Schizosaccharomyces pomb... 25 7.9
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 205 bits (501), Expect = 4e-54
Identities = 100/162 (61%), Positives = 116/162 (71%)
Frame = -3
Query: 679 KGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVI 500
+GPKVT V FD++ GD+ +G + IGLFGKTVPKT ENF LA +G GY+GS FHRVI
Sbjct: 21 RGPKVTDTVYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSIFHRVI 80
Query: 499 KNFMIQXXXXXXXXXXXGRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTV 320
NFMIQ G+SIYG RF DENFKL H G LSMANAG D+NGSQFFITTV
Sbjct: 81 PNFMIQGGDITKGDGTGGKSIYGSRFPDENFKLSHQRPGLLSMANAGPDSNGSQFFITTV 140
Query: 319 KTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVI 194
KTPWLDG HVVFG+VL G D+V+KI T D+P++DV I
Sbjct: 141 KTPWLDGHHVVFGEVLSGYDIVKKISKAETDNRDKPLEDVKI 182
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 161 bits (392), Expect = 7e-41
Identities = 83/154 (53%), Positives = 98/154 (63%)
Frame = -3
Query: 649 FDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXX 470
FD+ +G IV LF VPKT NF L +G GY GS FHRVI FM+Q
Sbjct: 6 FDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGDF 65
Query: 469 XXXXXXXGRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHV 290
G+SIYGE+F DENF LKH G LSMANAG +TNGSQFFITTV TPWLDG+HV
Sbjct: 66 TRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKHV 125
Query: 289 VFGKVLEGMDVVQKIEMTVTGANDRPVKDVVISD 188
VFG+V EGMDVV+K+E G+N + ++ D
Sbjct: 126 VFGEVTEGMDVVKKVES--LGSNSGATRARIVID 157
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 155 bits (377), Expect = 4e-39
Identities = 90/164 (54%), Positives = 103/164 (62%), Gaps = 4/164 (2%)
Frame = -3
Query: 658 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG----YKGSKFHRVIKNF 491
K+S D KI TI LF VPKT +NF L E +G YKGS+FHRVIKNF
Sbjct: 8 KISIDGKIQP----TIYFELFDNVVPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNF 63
Query: 490 MIQXXXXXXXXXXXGRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTP 311
M+Q G SIYGE+FEDENF+LKH LSMANAG +TNGSQFFITTV TP
Sbjct: 64 MLQGGDFTRGNGTGGESIYGEKFEDENFELKHDKPFLLSMANAGPNTNGSQFFITTVPTP 123
Query: 310 WLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVISDTKT 179
LDG+HVVFGKV++G V+ IE T ND PV VVI + T
Sbjct: 124 HLDGKHVVFGKVIQGKSTVRTIENLET-KNDDPVVPVVIEECGT 166
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 146 bits (353), Expect = 4e-36
Identities = 83/163 (50%), Positives = 98/163 (60%), Gaps = 9/163 (5%)
Frame = -3
Query: 655 VSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLA--------QKPEGEGYKGSKFHRVI 500
V D+ I +G I I LF VPKT ENF Q QKP G YK S FHR+I
Sbjct: 7 VFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIG--YKNSTFHRII 64
Query: 499 KNFMIQXXXXXXXXXXXGRSIYGER-FEDENFKLKHYGAGWLSMANAGKDTNGSQFFITT 323
+ FMIQ +I+ R F DENF LKH G LSMANAGKD+NG QFFITT
Sbjct: 65 QGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQFFITT 124
Query: 322 VKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVI 194
V +LDG+HVVFG+V+EG D+V++IE T GAN RP +V I
Sbjct: 125 VPCDFLDGKHVVFGEVIEGYDIVKEIESTPVGANSRPKSNVAI 167
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 128 bits (309), Expect = 8e-31
Identities = 67/145 (46%), Positives = 96/145 (66%), Gaps = 1/145 (0%)
Frame = -3
Query: 625 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXG 446
++G I+I L+ + PKT +NF+ LA+ EG Y G FHRVI +F+IQ
Sbjct: 9 SLGKILIELYTEHAPKTCQNFYTLAK--EGY-YDGVIFHRVIPDFVIQGGDPTGTGRGGT 65
Query: 445 RSIYGERFEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLE 269
SIYG++F+DE + L H GAG LSMANAG +TN SQFFIT TPWLDG+H +FG+V+
Sbjct: 66 -SIYGDKFDDEIHSDLHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFGRVVS 124
Query: 268 GMDVVQKIEMTVTGANDRPVKDVVI 194
G+ V +++ + T ++DRP++ + I
Sbjct: 125 GLSVCKRMGLIRTDSSDRPIEPLKI 149
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 111 bits (266), Expect = 1e-25
Identities = 64/143 (44%), Positives = 82/143 (57%), Gaps = 1/143 (0%)
Frame = -3
Query: 619 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXGRS 440
G I I L+ + PK +NF A E Y + FHR+IKNFMIQ S
Sbjct: 464 GDISIKLYPEEAPKAVQNFTTHA---ENGYYDNTIFHRIIKNFMIQGGDPLGDGTGG-ES 519
Query: 439 IYGERFEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGM 263
I+ + FEDE + LKH +SMAN+G +TNGSQFFITT TPWLDG+H +F + G+
Sbjct: 520 IWKKDFEDEISPNLKHDRPFTVSMANSGPNTNGSQFFITTDLTPWLDGKHTIFARAYAGL 579
Query: 262 DVVQKIEMTVTGANDRPVKDVVI 194
DVV +IE T DRP++ I
Sbjct: 580 DVVHRIEQGETDKYDRPLEPTKI 602
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 101 bits (241), Expect = 1e-22
Identities = 67/184 (36%), Positives = 95/184 (51%), Gaps = 1/184 (0%)
Frame = -3
Query: 625 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXG 446
N G I I L P NF QLA++ Y+ + FHR I FMIQ
Sbjct: 283 NHGEINIELHTDYAPHAVYNFVQLAKQGY---YRNTIFHRNIARFMIQGGDPSGTGRGG- 338
Query: 445 RSIYGERFEDENFK-LKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLE 269
+SI+G+ F+DE LKH G +SMAN GK+TNGSQFFI LD +H +FG+V+
Sbjct: 339 QSIWGKPFKDEFCNPLKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKHTIFGRVVG 398
Query: 268 GMDVVQKIEMTVTGANDRPVKDVVISDTKTEVVAEPFSGTKESAHXIEKKWLNDEDLHEH 89
G++V+ +E T +ND P + + D + +PF K+ EK+ +E+ E+
Sbjct: 399 GLNVLDALEKVPTNSNDHPKLPIKLED--IIIFVDPFEEWKKDEREKEKRKRQEEE-EEN 455
Query: 88 ALTR 77
L R
Sbjct: 456 NLDR 459
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 76.2 bits (179), Expect = 4e-15
Identities = 62/178 (34%), Positives = 86/178 (48%), Gaps = 2/178 (1%)
Frame = -3
Query: 619 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXGRS 440
G I I L+ K VPK NF QL EG Y G+ HRV+ F+IQ S
Sbjct: 22 GDIQIELWCKEVPKACRNFIQLCL--EGY-YDGTIVHRVVPEFLIQGGDPTGTGMGG-ES 77
Query: 439 IYGERFEDENF-KLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVL-EG 266
IYGE F E +L+ G + MA + N SQFFIT TP +G+ +FG+V+ +
Sbjct: 78 IYGEPFAVETHPRLRFIRRGLVGMACTENEGNNSQFFITLGPTPEWNGKQTLFGRVVGDT 137
Query: 265 MDVVQKIEMTVTGANDRPVKDVVISDTKTEVVAEPFSGTKESAHXIEKKWLNDEDLHE 92
+ V +I AN RPV I TEV+ F+ K + E++ + +E H+
Sbjct: 138 IYNVVRISELELDANQRPVFPPKI--ISTEVIDNYFTDIKPRSTKEEREKIANELAHQ 193
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 59.7 bits (138), Expect = 4e-10
Identities = 52/173 (30%), Positives = 79/173 (45%), Gaps = 15/173 (8%)
Frame = -3
Query: 631 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXX 452
+ +G +VI LF K PKT ENF +L + + Y F+ + N+ Q
Sbjct: 6 ETTVGDLVIDLFVKEAPKTCENFLKLCKL---KYYNFCPFYNIQHNYTCQTGDPLGPTGD 62
Query: 451 XGRSIY-----GERFEDENFK--LKHYGAGWLSMANA---GKDTN----GSQFFIT-TVK 317
GR ++ G RF F L H G +SM+ A +D GSQF IT +
Sbjct: 63 GGRCVWNVLNKGTRFFKAEFNPSLVHNKMGLVSMSTATISSRDDKLLVCGSQFIITLSDN 122
Query: 316 TPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVISDTKTEVVAEPF 158
LD R+ ++G+V EG D + KI + +P +D+ I T ++ +PF
Sbjct: 123 LEGLDERYPIYGQVAEGFDTLLKINDAICDEEGQPYRDIRIK--HTIILDDPF 173
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 29.5 bits (63), Expect = 0.48
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Frame = +3
Query: 150 VPLKGSATTSVFVSDITTSLTGRSFAPVTVISIFCT--TSIP---SKTLPKTTCLP 302
VP +++TS+ + +TS T + +P+ S CT TSIP + T P T +P
Sbjct: 251 VPPTSTSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTSIPPTGNSTTPVTPTVP 306
Score = 27.9 bits (59), Expect = 1.5
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 150 VPLKGSATTSVFVSDITTSLTGRSFAPVTVISIFCTTS 263
VP +++TS+ + +TS T + +P+ S CTTS
Sbjct: 195 VPPTSTSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTS 232
Score = 26.6 bits (56), Expect = 3.4
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 150 VPLKGSATTSVFVSDITTSLTGRSFAPVTVISIFCTTS 263
VP +++TS+ + +TS T + P+ S CTTS
Sbjct: 138 VPPTSTSSTSIPIPPTSTSSTDTNSNPLPTTSTSCTTS 175
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 29.5 bits (63), Expect = 0.48
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +3
Query: 171 TTSVFVSDITTSLTGRSFAPVTVISIFCTTSIPSKTLPKTT 293
TT+V+V+++ T G PVT SIF T + + T +T+
Sbjct: 466 TTTVWVTEVFTRYLGDDSTPVTSSSIFSTATEATDTSVQTS 506
>SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 772
Score = 25.8 bits (54), Expect = 6.0
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +2
Query: 443 APSSSITLGKITTLDHEIFNYSVELAPFVPLPLRFLS*LKEVLSCLRYSLS 595
+PSS + L K+ LDH + + S P P +++ K+ S L+ + S
Sbjct: 186 SPSSLVPLLKLPALDHAVSSSSSSDLPSDPNSASYIASSKQKASSLKLTSS 236
>SPAC1F7.03 |pkd2||TRP-like ion channel |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 710
Score = 25.4 bits (53), Expect = 7.9
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = -3
Query: 307 LDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVISDTKTEV 173
L G H + G+ L +D + I TV + ++ SDT T++
Sbjct: 109 LSGSHTLTGEALSILDSIPSIAYTVPDLDAVVTINIYESDTNTQL 153
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,572,564
Number of Sequences: 5004
Number of extensions: 51636
Number of successful extensions: 170
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 159
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 323158234
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -