Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_M11
(567 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 174 9e-45
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 112 4e-26
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 98 7e-22
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 95 5e-21
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 95 5e-21
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 94 1e-20
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 88 7e-19
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 64 1e-11
SPCC1450.16c |||triacylglycerol lipase|Schizosaccharomyces pombe... 26 4.4
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 174 bits (423), Expect = 9e-45
Identities = 78/178 (43%), Positives = 120/178 (67%), Gaps = 1/178 (0%)
Frame = -3
Query: 562 VFKMESSESRISTIVIRGXTDNYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIELAQ 383
VF+ +R +TIV+RG T Y+DD+ERAIDDGVN K + +D R + GAGA++++L
Sbjct: 362 VFRQVEDITRTATIVLRGATKTYLDDLERAIDDGVNIVKALVKDNRLIFGAGASDMQLCI 421
Query: 382 QLLEFADTLPGLEQYAVRKFAVALESIPRALADNSGANATEVVNKIYKA-HKEGQKNAGF 206
+L+ + PG+ Q+A++++ A E +PR +++N+G + T+V++K+Y A HKE ++ G
Sbjct: 422 RLISVGEKTPGIYQHAIKQYGEAFEVVPRTISENAGLDPTDVISKLYAAHHKENGESIGV 481
Query: 205 DIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTILKVDQIIMAKRAGGPKPRAP 32
D++ EN+G DAKE GI D L K I+ A T+L VDQ++M+K AGGPKP P
Sbjct: 482 DVECENDGTLDAKEAGIFDVLLAKKSAIRLATETVLTVLNVDQVVMSKPAGGPKPPGP 539
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 112 bits (269), Expect = 4e-26
Identities = 61/173 (35%), Positives = 103/173 (59%)
Frame = -3
Query: 541 ESRISTIVIRGXTDNYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIELAQQLLEFAD 362
+++ T+++RG D ++ ++ER++ D + K ++ V G GA E+EL++ L +++
Sbjct: 371 KAKTCTLILRGGADQFIAEVERSLHDAIMIVKHALKNNLVVAGGGACEMELSKYLRDYSL 430
Query: 361 TLPGLEQYAVRKFAVALESIPRALADNSGANATEVVNKIYKAHKEGQKNAGFDIDSENNG 182
T+ G +Q + FA +LE IPR L DN+G ++T ++NK+ H +G+ AG D+DSE G
Sbjct: 431 TISGKQQNFIAAFARSLEVIPRQLCDNAGFDSTNILNKLRMQHAKGEMWAGVDMDSE--G 488
Query: 181 VCDAKEKGIIDSYLLKFWGIKYAVGAATTILKVDQIIMAKRAGGPKPRAPAGS 23
V + EK + + +K I A AAT IL VD+ I K +P+AP G+
Sbjct: 489 VANNFEKFVWEPSTVKSNAILSATEAATLILSVDETI--KNEPSQQPQAPQGA 539
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 98.3 bits (234), Expect = 7e-22
Identities = 52/156 (33%), Positives = 87/156 (55%)
Frame = -3
Query: 526 TIVIRGXTDNYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIELAQQLLEFADTLPGL 347
TI++RG + + ++++ER + D + + + + PG GATE+ ++ +L E A ++ G+
Sbjct: 371 TILLRGPSKDIINEVERNLQDAMAVARNVFFHPKLSPGGGATEMAVSVRLAEKARSIEGV 430
Query: 346 EQYAVRKFAVALESIPRALADNSGANATEVVNKIYKAHKEGQKNAGFDIDSENNGVCDAK 167
Q+ R A A+E IPR L N GAN + + ++ H EGQ + F ID E V D
Sbjct: 431 AQWPYRAVADAIEIIPRTLVQNCGANPIKALTELRAKHAEGQHS--FGIDGETGRVVDMH 488
Query: 166 EKGIIDSYLLKFWGIKYAVGAATTILKVDQIIMAKR 59
E G+ + +K IK A+ +A +L+VD I+ R
Sbjct: 489 EYGVWEPEAVKLQSIKTAIESACLLLRVDDIVSGVR 524
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 95.5 bits (227), Expect = 5e-21
Identities = 53/160 (33%), Positives = 89/160 (55%)
Frame = -3
Query: 544 SESRISTIVIRGXTDNYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIELAQQLLEFA 365
+ SR T+ +RG +D+ +RA+ D + + + RD R V G GA EI + + + A
Sbjct: 380 ANSRAVTVFVRGSNKMIVDEAKRALHDALCVVRNLIRDNRVVYGGGAAEISCSLAVTKEA 439
Query: 364 DTLPGLEQYAVRKFAVALESIPRALADNSGANATEVVNKIYKAHKEGQKNAGFDIDSENN 185
+ +PG++QY++ FA AL++IP ALA+NSG ++ E + + KA + A ID
Sbjct: 440 EKIPGIDQYSMGAFADALDTIPLALAENSGLSSIEALTAV-KARHVKENKAYLGIDCLQT 498
Query: 184 GVCDAKEKGIIDSYLLKFWGIKYAVGAATTILKVDQIIMA 65
G D +++ +ID + K + A +LKV+ II+A
Sbjct: 499 GSNDMRKQFVIDPLIGKKQQLLLATQLCRMVLKVNDIIVA 538
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 95.5 bits (227), Expect = 5e-21
Identities = 56/163 (34%), Positives = 86/163 (52%)
Frame = -3
Query: 526 TIVIRGXTDNYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIELAQQLLEFADTLPGL 347
TIV+RG T +D+ ERAI D + + R G G E+ +A+ + E A PG
Sbjct: 368 TIVLRGATHQLLDESERAIHDALAVLSQTVAESRVTLGGGCAEMLMAKAVEEAATHEPGK 427
Query: 346 EQYAVRKFAVALESIPRALADNSGANATEVVNKIYKAHKEGQKNAGFDIDSENNGVCDAK 167
+ AV FA AL +P LADN+G +++E+V ++ AH +G G D+D + D +
Sbjct: 428 KAVAVSAFAKALSQLPTILADNAGFDSSELVAQLKAAHYDGNDTMGLDMD--EGEIADMR 485
Query: 166 EKGIIDSYLLKFWGIKYAVGAATTILKVDQIIMAKRAGGPKPR 38
KGI+++ LK + A +L+VD I+ A P+PR
Sbjct: 486 AKGILEALKLKQAVVSSGSEGAQLLLRVDTILKA----APRPR 524
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 93.9 bits (223), Expect = 1e-20
Identities = 50/155 (32%), Positives = 84/155 (54%)
Frame = -3
Query: 526 TIVIRGXTDNYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIELAQQLLEFADTLPGL 347
+I+ RG +++ ER++ D + + + + + G G+ EIE AQ+LLE A L G
Sbjct: 375 SILCRGANLLTLEEAERSLHDALCVIRCLVKQRALIAGGGSPEIEAAQRLLEHARQLEGR 434
Query: 346 EQYAVRKFAVALESIPRALADNSGANATEVVNKIYKAHKEGQKNAGFDIDSENNGVCDAK 167
E +R F+ ALE IP LA+N+G NA +VV ++ H G+K AG ++ V +
Sbjct: 435 EAICIRAFSEALEIIPVTLAENAGLNAIQVVTELRSRHANGEKTAGINV--RKGIVTNIL 492
Query: 166 EKGIIDSYLLKFWGIKYAVGAATTILKVDQIIMAK 62
E+ ++ L+ I+ A I+K+D I +A+
Sbjct: 493 EENVLQPLLVNISAIQLAAETTKMIMKIDDITLAR 527
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 88.2 bits (209), Expect = 7e-19
Identities = 56/165 (33%), Positives = 87/165 (52%), Gaps = 12/165 (7%)
Frame = -3
Query: 529 STIVIRGXTDNYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIELAQQLLEFADTLPG 350
++IV+RG + +D++ER++ D ++ K G+ VPG GA E L+ L FA +L
Sbjct: 378 ASIVLRGPNEYSLDEMERSMHDSLSVVKRTLESGKVVPGGGAVETALSIYLENFATSLGS 437
Query: 349 LEQYAVRKFAVALESIPRALADNSGANATEVVNKIYKAH------------KEGQKNAGF 206
EQ A+ +FA AL IPR LA N+ ++TE+ K+ H K G KN G
Sbjct: 438 REQLAIAEFAQALLIIPRTLAVNAAKDSTELTAKLRAYHAASQNAEVTDVKKRGYKNYGL 497
Query: 205 DIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTILKVDQII 71
D+ N + D + G+++ + K +K AV A IL++D I
Sbjct: 498 DL--LNGVIRDNVKAGVLEPSMSKLKSLKSAVEACIAILRIDTSI 540
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 64.1 bits (149), Expect = 1e-11
Identities = 48/170 (28%), Positives = 79/170 (46%), Gaps = 2/170 (1%)
Frame = -3
Query: 559 FKMESSESRISTIVIRGXTDNYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIELAQQ 380
F + + + +TI+I G + I+ A DG+ K D + GAGA E+ A
Sbjct: 361 FVEDVKDPKSATILIHGPNTYTIQQIQDATRDGLRAVKNAVEDNCLIVGAGAFEVACAAH 420
Query: 379 LLE--FADTLPGLEQYAVRKFAVALESIPRALADNSGANATEVVNKIYKAHKEGQKNAGF 206
L A + G + V +A AL IP+ LA NS + + + + + EG K G
Sbjct: 421 LRNKFAAKEVKGKAKMGVYAYADALLIIPKTLAANSSYDTQDAIVALQEEASEGYK-VGL 479
Query: 205 DIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTILKVDQIIMAKRA 56
D+ + D + +GI D+Y + + A A+ ++ VDQI+ A R+
Sbjct: 480 DL--KTGMPFDPEVEGIYDNYRVIRHMLHSATVIASNLISVDQILRAGRS 527
>SPCC1450.16c |||triacylglycerol lipase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 513
Score = 25.8 bits (54), Expect = 4.4
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +3
Query: 123 IPQNFKRY--ESIMPFSFASQTPLFSESISKPAFFCPSL 233
+P +R+ + +P ++ + TP FS S K AF PSL
Sbjct: 434 LPPRLRRFFVDDYVPSAYITLTPTFSFSDIKHAFTKPSL 472
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,219,747
Number of Sequences: 5004
Number of extensions: 43553
Number of successful extensions: 135
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 130
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 240047038
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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