Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_M11
(567 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0362 + 33379489-33379624,33380161-33380423,33380524-333806... 184 3e-47
06_03_1193 - 28298656-28298754,28299303-28299377,28299456-282995... 110 9e-25
06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118... 104 6e-23
02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037,832... 104 6e-23
10_08_0620 - 19321612-19323237 98 5e-21
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516... 92 3e-19
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 89 2e-18
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 89 2e-18
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 86 2e-17
04_04_0729 + 27612106-27612195,27612284-27612370,27612469-276125... 82 3e-16
11_06_0178 + 20942757-20942801,20943790-20943867,20943930-209440... 79 3e-15
05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102,265... 78 4e-15
06_01_0097 - 810283-810296,810398-810521,810974-811066,811144-81... 47 1e-05
04_04_1141 + 31180906-31181249,31181719-31181862,31181971-311820... 29 2.0
01_05_0793 + 25278846-25279504,25279598-25279702,25280949-252810... 29 2.0
09_04_0669 + 19335661-19335917,19336153-19336279,19336393-193367... 28 4.5
04_03_0913 + 20777859-20780309 28 6.0
>03_06_0362 +
33379489-33379624,33380161-33380423,33380524-33380670,
33380753-33380914,33381681-33381758,33382329-33382462,
33382702-33382774,33382852-33382929,33383002-33383124,
33383223-33383317,33383723-33383932,33384115-33384172,
33384268-33384333
Length = 540
Score = 184 bits (449), Expect = 3e-47
Identities = 88/183 (48%), Positives = 123/183 (67%)
Frame = -3
Query: 562 VFKMESSESRISTIVIRGXTDNYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIELAQ 383
V K E + ++T+V+RG TD+ +DD+ERA+DDGVNT+K + RD R +PGA ATEIELA+
Sbjct: 360 VVKNEEGGNSVATVVLRGSTDSILDDLERAVDDGVNTYKSMCRDSRIIPGAAATEIELAR 419
Query: 382 QLLEFADTLPGLEQYAVRKFAVALESIPRALADNSGANATEVVNKIYKAHKEGQKNAGFD 203
+L EF+ GL+QYA+ KFA + E +PR LA+N+G +A E+++ +Y H G G
Sbjct: 420 RLKEFSLKETGLDQYAIAKFAESFEMVPRTLAENAGLSAMEIISSLYAEHAGGNTKVG-- 477
Query: 202 IDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTILKVDQIIMAKRAGGPKPRAPAGS 23
ID E G D I D Y+ K + +KY+ AA T+L+VDQIIMAK AGGP+ A G
Sbjct: 478 IDLEEGGCKDVSIMKIWDLYVTKLFALKYSADAACTVLRVDQIIMAKPAGGPRRDAQPGM 537
Query: 22 DDE 14
D++
Sbjct: 538 DED 540
>06_03_1193 -
28298656-28298754,28299303-28299377,28299456-28299544,
28299679-28299760,28300385-28300474,28300557-28300655,
28300733-28300852,28300968-28301084,28301174-28301309,
28301415-28301584,28301744-28301947,28302032-28302157,
28302841-28303101,28303215-28303229
Length = 560
Score = 110 bits (264), Expect = 9e-25
Identities = 56/169 (33%), Positives = 96/169 (56%)
Frame = -3
Query: 529 STIVIRGXTDNYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIELAQQLLEFADTLPG 350
+TIV+RG D ++++ ER++ D + + ++ VPG GA ++E+++ L + A T+ G
Sbjct: 373 ATIVLRGGADQFIEEAERSLHDAIMIVRRALKNSTVVPGGGAIDMEISKYLRQHARTIAG 432
Query: 349 LEQYAVRKFAVALESIPRALADNSGANATEVVNKIYKAHKEGQKNAGFDIDSENNGVCDA 170
Q+ V FA ALE IPR L DN+G +AT+V+NK+ + H G+ A F +D G+ D+
Sbjct: 433 KSQFFVNSFAKALEVIPRQLCDNAGFDATDVLNKLRQKHASGE-GANFGVDINTGGIADS 491
Query: 169 KEKGIIDSYLLKFWGIKYAVGAATTILKVDQIIMAKRAGGPKPRAPAGS 23
+ + ++K I A AA IL VD+ + ++ + A A +
Sbjct: 492 FANFVWEPAVVKINAINAATEAACLILSVDETVKNPKSESAQGDAAASA 540
>06_03_0353 +
19810945-19810975,19811308-19811369,19811741-19811813,
19813292-19813359,19813496-19813565,19813908-19813976,
19814065-19814136,19814247-19814320,19814420-19814697,
19814804-19815188,19815268-19815393,19815583-19815687,
19815986-19815994,19817040-19817114,19817202-19817390
Length = 561
Score = 104 bits (249), Expect = 6e-23
Identities = 55/188 (29%), Positives = 103/188 (54%), Gaps = 4/188 (2%)
Frame = -3
Query: 559 FKMESSESRISTIVIRGXTDNYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIELAQQ 380
F ++ + + T+++RG + + ++++ER + D ++ + I ++ + +PG GATE+ ++
Sbjct: 364 FIVDCKDPKACTVLLRGASKDVLNEVERNLQDAMSVARNILKNPKLLPGGGATELTVSAA 423
Query: 379 LLEFADTLPGLEQYAVRKFAVALESIPRALADNSGANATEVVNKIY---KAHKEGQKNAG 209
L + + ++ G+E++ A+A E+IPR LA N G N ++ ++ H G+ NA
Sbjct: 424 LKQKSSSVEGVEKWPYEAAALAFEAIPRTLAQNCGLNVIRIMTQLQGKDMLHANGE-NAW 482
Query: 208 FDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTILKVDQIIMA-KRAGGPKPRAP 32
ID + + D KE+ I DSY +K K A+ AA +L++D I+ K+ P AP
Sbjct: 483 VGIDGRSGDIVDMKERKIWDSYSVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGASAP 542
Query: 31 AGSDDEAE 8
E E
Sbjct: 543 KQPQIEQE 550
>02_02_0253 -
8325437-8325628,8325705-8325779,8325933-8326037,
8326249-8326374,8326451-8326835,8326931-8327208,
8327294-8327367,8327476-8327547,8327637-8327705,
8340132-8340201,8340806-8340873,8341571-8341643,
8341807-8341868,8342168-8342198
Length = 559
Score = 104 bits (249), Expect = 6e-23
Identities = 53/179 (29%), Positives = 101/179 (56%)
Frame = -3
Query: 559 FKMESSESRISTIVIRGXTDNYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIELAQQ 380
F ++ + + T+++RG + + ++++ER + D ++ + I ++ + +PG GATE+ ++
Sbjct: 364 FIVDCKDPKACTVLLRGASKDVLNEVERNLQDAMSMARNIWKNPKLLPGGGATELTVSAT 423
Query: 379 LLEFADTLPGLEQYAVRKFAVALESIPRALADNSGANATEVVNKIYKAHKEGQKNAGFDI 200
L + + ++ G+E++ A+A E+IPR L N G N + ++ H G+ NA I
Sbjct: 424 LKQKSSSVEGVEKWPYEAAALAFEAIPRTLLQNCGLNVIRTMTQLQGKHANGE-NAWVGI 482
Query: 199 DSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTILKVDQIIMAKRAGGPKPRAPAGS 23
D + + D KE+ I DSY +K K A+ AA +L++D I+ +G K +AP S
Sbjct: 483 DGSSGDIVDMKERKIWDSYSVKAQTFKTAIEAACMLLRIDDIV----SGIKKKQAPGAS 537
>10_08_0620 - 19321612-19323237
Length = 541
Score = 97.9 bits (233), Expect = 5e-21
Identities = 48/158 (30%), Positives = 84/158 (53%)
Frame = -3
Query: 535 RISTIVIRGXTDNYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIELAQQLLEFADTL 356
R +T+++RG +D+ +R++ D + + + G GA EIE++ QL +A L
Sbjct: 386 RTATVLVRGSNQMVIDEAQRSLHDAFCVIRCLVNKRFLIAGGGAPEIEMSMQLAAWAKEL 445
Query: 355 PGLEQYAVRKFAVALESIPRALADNSGANATEVVNKIYKAHKEGQKNAGFDIDSENNGVC 176
G+E Y VR+FA ALE IP LA+N+G + V ++ H +G+KNAG ++ +
Sbjct: 446 RGMESYCVREFAEALEVIPYTLAENAGLDPISTVTELRNRHAKGEKNAGINV--RKGRIT 503
Query: 175 DAKEKGIIDSYLLKFWGIKYAVGAATTILKVDQIIMAK 62
+ E+ ++ L+ + A ILK+D I+ +
Sbjct: 504 NILEENVVQPLLVSTSAVTLACECVRMILKIDDIVTVR 541
>06_03_0477 -
21250811-21250981,21251261-21251374,21251447-21251613,
21252051-21252153,21252315-21252367,21252438-21252570,
21252835-21253183,21253685-21254003,21254519-21254717
Length = 535
Score = 91.9 bits (218), Expect = 3e-19
Identities = 51/160 (31%), Positives = 86/160 (53%)
Frame = -3
Query: 550 ESSESRISTIVIRGXTDNYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIELAQQLLE 371
+ + SR TI IRG +++ +R++ D + + + R+ V G G+ EI + +
Sbjct: 372 QCANSRAVTIFIRGGNKMMIEETKRSLHDALCVARNLIRNNSIVYGGGSAEISCSVAVEA 431
Query: 370 FADTLPGLEQYAVRKFAVALESIPRALADNSGANATEVVNKIYKAHKEGQKNAGFDIDSE 191
AD PG+EQYA+R FA AL++IP ALA+NSG + + + + K+ + + N ID
Sbjct: 432 AADRYPGVEQYAIRSFADALDAIPLALAENSGLSPIDTLTAV-KSQQVKESNPHCGIDCN 490
Query: 190 NNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTILKVDQII 71
+ G KE+ + ++ + K I A ILK+D +I
Sbjct: 491 DVGTNHMKEQNVFETLIGKQQQILLATQVVKMILKIDDVI 530
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 89.4 bits (212), Expect = 2e-18
Identities = 51/174 (29%), Positives = 87/174 (50%), Gaps = 16/174 (9%)
Frame = -3
Query: 535 RISTIVIRGXTDNYMDDIERAIDDG----------------VNTFKGIARDGRFVPGAGA 404
R +T+++RG +D+ ER++ D VN + + + G GA
Sbjct: 379 RTATVLVRGSNQLVIDEAERSLHDALCVIRLVSGLINELQRVNWLRCLVNKRFLIAGGGA 438
Query: 403 TEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADNSGANATEVVNKIYKAHKEG 224
EIE++ QL +A L G+E Y +++FA ALE IP LA+N+G N +V ++ H +G
Sbjct: 439 PEIEMSMQLAAWAKELQGMESYCIKEFAEALEVIPYTLAENAGLNPISIVTELRNRHAKG 498
Query: 223 QKNAGFDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTILKVDQIIMAK 62
+KNAG ++ + + E+ ++ L+ I A ILK+D I+ +
Sbjct: 499 EKNAGINV--RKGQITNILEENVVQPLLVSTSAITLACECVRMILKIDDIVTVR 550
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 89.0 bits (211), Expect = 2e-18
Identities = 47/152 (30%), Positives = 91/152 (59%)
Frame = -3
Query: 526 TIVIRGXTDNYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIELAQQLLEFADTLPGL 347
TIV+RG +++ +D+ ER++ D + D R + G G E+ +A+ + + A PG
Sbjct: 365 TIVLRGASEHVLDEAERSLHDALCVLSQTVNDTRVLFGGGWPEMVMAKAVDDLARKTPGK 424
Query: 346 EQYAVRKFAVALESIPRALADNSGANATEVVNKIYKAHKEGQKNAGFDIDSENNGVCDAK 167
+ +A+ F+ AL++IP +ADN+G ++ E+++++ H + AG D+ + + G D +
Sbjct: 425 KSHAIDAFSRALQAIPTIIADNAGLDSAELISQLRAEHHKENCTAGIDVITGSVG--DMQ 482
Query: 166 EKGIIDSYLLKFWGIKYAVGAATTILKVDQII 71
++GI +++ +K + A AA IL+VD+II
Sbjct: 483 KRGISEAFKVKQAILLSATEAAEMILRVDEII 514
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 85.8 bits (203), Expect = 2e-17
Identities = 49/161 (30%), Positives = 89/161 (55%), Gaps = 9/161 (5%)
Frame = -3
Query: 526 TIVIRGXTDNYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIELAQQLLEFADTLPGL 347
TIV+RG +++ +D+ ER++ D + D R + G G E+ +A+++ A PG
Sbjct: 342 TIVLRGASEHVLDEAERSLHDALCVLSQTVNDTRVLYGGGWPEMVMAKEVDGLARKTPGK 401
Query: 346 EQYAVRKFAVALESIPRALADNSGANATEVVNKIYKAHKEGQKNAGFDIDSENN------ 185
+ +A+ F+ AL+SIP +ADN+G ++ ++++++ H + Q AG D+ S
Sbjct: 402 KSHAIEAFSRALQSIPTIIADNAGLDSADLISQLRAEHHKEQSTAGIDVISGGGLELILR 461
Query: 184 ---GVCDAKEKGIIDSYLLKFWGIKYAVGAATTILKVDQII 71
V D ++ GI +S+ K + A AA IL+VD+I+
Sbjct: 462 LLPQVGDMEKLGISESFKAKQAVLMSATEAAEMILRVDEIV 502
>04_04_0729 +
27612106-27612195,27612284-27612370,27612469-27612528,
27612554-27612688,27612769-27612864,27613149-27613214,
27613647-27613864,27614093-27614189,27614605-27614691,
27614892-27615026,27615121-27615225,27615717-27615845,
27615925-27616028,27616598-27616688,27616774-27616857
Length = 527
Score = 82.2 bits (194), Expect = 3e-16
Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 7/166 (4%)
Frame = -3
Query: 526 TIVIRGXTDNYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIELAQQLLEFADTLPGL 347
+I++RG D +D+I+R++ D + K V G GA E L+ L A TL
Sbjct: 359 SIILRGANDFMLDEIDRSLHDALCIVKRTLESNMVVAGGGAVEAALSVYLENLATTLGSR 418
Query: 346 EQYAVRKFAVALESIPRALADNSGANATEVVNKIYKAHKEGQKNA------GFDIDSENN 185
EQ A+ +FA +L IP+ L+ N+ +ATE+V K+ H Q A +D
Sbjct: 419 EQLAIAEFAESLLIIPKVLSVNAAKDATELVAKLRAYHHTAQTKADKQHFSSMGLDLSKG 478
Query: 184 GVCDAKEKGIIDSYLLKFWGIKYAVGAATTILKVDQII-MAKRAGG 50
+ + E G+I+ + K I++A AA TIL++D +I + K G
Sbjct: 479 IIRNNLEYGVIEPAMSKVKIIQFATEAAITILRIDDMIKLTKEESG 524
>11_06_0178 +
20942757-20942801,20943790-20943867,20943930-20944025,
20944114-20944221,20944322-20944420
Length = 141
Score = 78.6 bits (185), Expect = 3e-15
Identities = 33/62 (53%), Positives = 47/62 (75%)
Frame = -3
Query: 550 ESSESRISTIVIRGXTDNYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIELAQQLLE 371
E + ++ V+RG TD+ +DD+ RA+DDGVNT+K + RD R +PGA ATEIELA++L E
Sbjct: 75 EEGRNSVAIAVLRGSTDSILDDLGRAVDDGVNTYKSMCRDSRIIPGAAATEIELAKRLKE 134
Query: 370 FA 365
F+
Sbjct: 135 FS 136
>05_01_0337 -
2658647-2658722,2658797-2658915,2658995-2659102,
2659187-2659255,2659561-2659655,2659740-2659944,
2660125-2660211,2660291-2660405,2660696-2660802,
2661054-2661146,2661243-2661290,2661345-2661544,
2661993-2662128,2662228-2662291,2662779-2662912
Length = 551
Score = 78.2 bits (184), Expect = 4e-15
Identities = 51/160 (31%), Positives = 81/160 (50%), Gaps = 1/160 (0%)
Frame = -3
Query: 535 RISTIVIRGXTDNYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIELAQQLLE-FADT 359
R TI+I+G D+ + I+ A+ DG+ + K D V GAGA E+ + L++ T
Sbjct: 389 RSCTILIKGPNDHTIAQIKDAVRDGLRSVKNTVEDEAVVLGAGAFEVAAKKHLIDNVKKT 448
Query: 358 LPGLEQYAVRKFAVALESIPRALADNSGANATEVVNKIYKAHKEGQKNAGFDIDSENNGV 179
+ G Q V FA AL IP+ LA+NSG + +V+ + H G ++ +
Sbjct: 449 VKGRAQLGVEAFADALLVIPKTLAENSGLDTQDVIVSLQNEHDRG---LVVGLNHHSGEP 505
Query: 178 CDAKEKGIIDSYLLKFWGIKYAVGAATTILKVDQIIMAKR 59
D + +GI D+Y +K I A+ +L VD++I A R
Sbjct: 506 IDPQMEGIFDNYSVKRQIINSGPIIASQLLLVDEVIRAGR 545
>06_01_0097 -
810283-810296,810398-810521,810974-811066,811144-811236,
811410-811514,811661-811732,811857-811934,812210-812379,
812507-812741,812832-813074,813243-813338,813445-813582,
814014-814139,814235-814453
Length = 601
Score = 46.8 bits (106), Expect = 1e-05
Identities = 38/165 (23%), Positives = 68/165 (41%), Gaps = 1/165 (0%)
Frame = -3
Query: 532 ISTIVIRGXTDNYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIELAQQLLEFADTLP 353
++ I + T+ + + + ++D +N K +G V G G T + LA ++ D L
Sbjct: 431 VAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLAARVDAIKDNLE 489
Query: 352 GLEQYAVRKFAVALESIP-RALADNSGANATEVVNKIYKAHKEGQKNAGFDIDSENNGVC 176
EQ + S P + +A N+G N + V K+ N F ++
Sbjct: 490 NDEQKVGAEIVRRALSYPLKLIAKNAGVNGSVVTEKVLS-----NDNFKFGYNAATGQYE 544
Query: 175 DAKEKGIIDSYLLKFWGIKYAVGAATTILKVDQIIMAKRAGGPKP 41
D GIID + +++A A T L D +++ + P P
Sbjct: 545 DLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDVVVVEIKEPEPAP 589
>04_04_1141 +
31180906-31181249,31181719-31181862,31181971-31182054,
31182196-31182236,31182726-31182803,31183050-31183139,
31183236-31183325,31183808-31183962,31184737-31184796
Length = 361
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = -3
Query: 199 DSENNGVCDAKEKGIIDSYLLK 134
DSEN+G A +KG++DS +L+
Sbjct: 248 DSENSGTASATKKGVLDSIVLQ 269
>01_05_0793 +
25278846-25279504,25279598-25279702,25280949-25281071,
25281167-25281337,25281440-25281569,25281797-25282039,
25282084-25282202,25282269-25282331,25282423-25282486
Length = 558
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = -3
Query: 277 GANATEVVNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYLLKFW 128
G+N+TE NK+ + + G+D+ G +E +I Y+L W
Sbjct: 497 GSNSTEFANKVERTGSSTSDSLGYDVIDHQCGYRSDRE--MIGRYMLVLW 544
>09_04_0669 +
19335661-19335917,19336153-19336279,19336393-19336771,
19336857-19336915,19337413-19337449,19337629-19337996,
19338493-19338543
Length = 425
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 23 TSSWRSWFWPACSLCHNDLINLKNGCCCSNSILY 124
+S+ RS W C C DL++L + CSN+I +
Sbjct: 61 SSAARSRLW--CPFCSADLVDLDSRFACSNAIYH 92
>04_03_0913 + 20777859-20780309
Length = 816
Score = 27.9 bits (59), Expect = 6.0
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 56 CSLCHNDLINLKNGCCCSNS 115
CS+ HN+L+N++ C NS
Sbjct: 401 CSIWHNELLNIRKDQCSENS 420
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,532,536
Number of Sequences: 37544
Number of extensions: 280481
Number of successful extensions: 814
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 807
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1305140760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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