BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_M10
(681 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 38 0.044
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 38 0.044
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 38 0.044
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 38 0.044
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 38 0.044
AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 38 0.044
AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 38 0.044
M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein. 34 0.41
M74027-1|AAA59875.1| 573|Homo sapiens mucin protein. 34 0.41
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein. 34 0.41
BC025688-1|AAH25688.1| 377|Homo sapiens mucin 7, secreted protein. 34 0.54
AY553630-1|AAT36325.1| 1450|Homo sapiens ARAP1b protein protein. 33 1.2
AK128837-1|BAC87637.1| 286|Homo sapiens protein ( Homo sapiens ... 33 1.2
AJ621557-1|CAF21317.1| 1450|Homo sapiens ARAP1 protein. 33 1.2
AB209473-1|BAD92710.1| 1474|Homo sapiens centaurin delta 2 isofo... 33 1.2
BC117688-1|AAI17689.1| 1966|Homo sapiens dedicator of cytokinesi... 32 2.2
AY233380-1|AAO73565.1| 1966|Homo sapiens DOCK4 protein. 32 2.2
AK098050-1|BAC05221.1| 279|Homo sapiens protein ( Homo sapiens ... 32 2.2
AC005047-1|AAS07431.1| 168|Homo sapiens unknown protein. 32 2.2
AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein. 32 2.2
AB018259-1|BAA34436.3| 1388|Homo sapiens KIAA0716 protein protein. 32 2.2
U12535-1|AAA62280.1| 822|Homo sapiens epidermal growth factor r... 31 2.9
BC117689-1|AAI17690.1| 2011|Homo sapiens DOCK4 protein protein. 31 2.9
AB029009-1|BAA83038.1| 902|Homo sapiens KIAA1086 protein protein. 31 2.9
AF312918-1|AAG34121.1| 919|Homo sapiens MondoA protein. 28 4.8
AB020674-1|BAA74890.2| 568|Homo sapiens KIAA0867 protein protein. 28 4.9
AF245480-1|AAL55689.1| 526|Homo sapiens Mlx interactor alpha pr... 28 5.0
BC028309-1|AAH28309.1| 453|Homo sapiens MLXIP protein protein. 28 5.0
AF245481-1|AAL55690.1| 379|Homo sapiens Mlx interactor beta pro... 28 5.1
BC039704-1|AAH39704.1| 217|Homo sapiens MLXIP protein protein. 28 5.4
BC016152-1|AAH16152.1| 318|Homo sapiens PHACTR4 protein protein. 30 6.6
AY324389-1|AAQ86961.1| 1332|Homo sapiens neural interleukin 16 p... 30 6.6
AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain... 30 6.6
AK131530-1|BAD18668.1| 1331|Homo sapiens protein ( Homo sapiens ... 30 6.6
AK126222-1|BAC86494.1| 824|Homo sapiens protein ( Homo sapiens ... 30 6.6
AK124565-1|BAC85888.1| 1163|Homo sapiens protein ( Homo sapiens ... 30 6.6
U50839-1|AAC35207.1| 1123|Homo sapiens g16 protein protein. 30 8.8
BC046643-1|AAH46643.1| 601|Homo sapiens RBM6 protein protein. 30 8.8
BC030010-1|AAH30010.1| 822|Homo sapiens epidermal growth factor... 30 8.8
AK057444-1|BAB71489.1| 602|Homo sapiens protein ( Homo sapiens ... 30 8.8
AK025429-1|BAB15128.1| 274|Homo sapiens protein ( Homo sapiens ... 30 8.8
AF356185-1|AAK39108.1| 565|Homo sapiens autoimmune infertility-... 30 8.8
AF279145-1|AAK52094.1| 564|Homo sapiens tumor endothelial marke... 30 8.8
AF091264-1|AAD04160.1| 1123|Homo sapiens RNA binding motif prote... 30 8.8
AF069517-1|AAC21578.1| 1123|Homo sapiens RNA binding protein DEF... 30 8.8
AF042857-1|AAC05826.1| 1123|Homo sapiens lung cancer antigen NY-... 30 8.8
AC112230-1|AAX88860.1| 329|Homo sapiens unknown protein. 30 8.8
>BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 37.5 bits (83), Expect = 0.044
Identities = 19/46 (41%), Positives = 24/46 (52%)
Frame = -2
Query: 680 TPPSQXRTPPAPSTRDTPAPLKLSSNITLKPSARPPKPLARFTKPP 543
TPP + RTP P R +P+P + S I + S PP P R PP
Sbjct: 574 TPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPP-PKRRTASPP 618
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 37.5 bits (83), Expect = 0.044
Identities = 19/46 (41%), Positives = 24/46 (52%)
Frame = -2
Query: 680 TPPSQXRTPPAPSTRDTPAPLKLSSNITLKPSARPPKPLARFTKPP 543
TPP + RTP P R +P+P + S I + S PP P R PP
Sbjct: 574 TPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPP-PKRRTASPP 618
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 37.5 bits (83), Expect = 0.044
Identities = 19/46 (41%), Positives = 24/46 (52%)
Frame = -2
Query: 680 TPPSQXRTPPAPSTRDTPAPLKLSSNITLKPSARPPKPLARFTKPP 543
TPP + RTP P R +P+P + S I + S PP P R PP
Sbjct: 583 TPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPP-PKRRTASPP 627
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 37.5 bits (83), Expect = 0.044
Identities = 19/46 (41%), Positives = 24/46 (52%)
Frame = -2
Query: 680 TPPSQXRTPPAPSTRDTPAPLKLSSNITLKPSARPPKPLARFTKPP 543
TPP + RTP P R +P+P + S I + S PP P R PP
Sbjct: 574 TPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPP-PKRRTASPP 618
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 37.5 bits (83), Expect = 0.044
Identities = 19/46 (41%), Positives = 24/46 (52%)
Frame = -2
Query: 680 TPPSQXRTPPAPSTRDTPAPLKLSSNITLKPSARPPKPLARFTKPP 543
TPP + RTP P R +P+P + S I + S PP P R PP
Sbjct: 583 TPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPP-PKRRTASPP 627
>AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 37.5 bits (83), Expect = 0.044
Identities = 19/46 (41%), Positives = 24/46 (52%)
Frame = -2
Query: 680 TPPSQXRTPPAPSTRDTPAPLKLSSNITLKPSARPPKPLARFTKPP 543
TPP + RTP P R +P+P + S I + S PP P R PP
Sbjct: 572 TPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPP-PKRRTASPP 616
>AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 37.5 bits (83), Expect = 0.044
Identities = 19/46 (41%), Positives = 24/46 (52%)
Frame = -2
Query: 680 TPPSQXRTPPAPSTRDTPAPLKLSSNITLKPSARPPKPLARFTKPP 543
TPP + RTP P R +P+P + S I + S PP P R PP
Sbjct: 572 TPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPP-PKRRTASPP 616
>M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein.
Length = 1270
Score = 34.3 bits (75), Expect = 0.41
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Frame = -2
Query: 677 PPSQXRTP-----PAPSTRDTPAPLKLSSNITLKPSARPPKPLARFTKPPTGT 534
PP+ TP P+P T TP+P +++ T P+ P P+ PPT T
Sbjct: 1019 PPTTTTTPPPTTTPSPPTTTTPSP-PITTTTTPPPTTTPSSPITTTPSPPTTT 1070
Score = 33.1 bits (72), Expect = 0.94
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Frame = -2
Query: 680 TPPSQXRTPPAPSTRDTP---APL-KLSSNITLKPSARP-PKPLARFTKPPTGT 534
+PP+ T P P+T +P P+ +S TL P+ P P P T PPT T
Sbjct: 899 SPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTT 952
Score = 32.3 bits (70), Expect = 1.6
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = -2
Query: 680 TPPSQXRTPPAPSTRDTPAPLKLSSNITLKPSARPPKPLARFTKPPTGT 534
TPP T P+P T TP+P +++ T P+ P P T PP T
Sbjct: 946 TPPPT--TTPSPPTTTTPSPPTITTT-TPPPTTTPSPPTTTTTTPPPTT 991
Score = 31.9 bits (69), Expect = 2.2
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Frame = -2
Query: 680 TPPSQXRTPPAPSTRDTP---APL-KLSSNITLKPSARPPKPLARFTKPPTGT 534
+PP+ T P P+T +P P+ +S TL P+ P P T PP T
Sbjct: 860 SPPTTTTTTPPPTTTPSPPMTTPITPPASTTTLPPTTTPSPPTTTTTTPPPTT 912
Score = 31.5 bits (68), Expect = 2.9
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = -2
Query: 680 TPPSQXRTPPAPSTRDTPAPLKLSSNITLKPSARPPKPLARFTKPPTGT 534
+PP+ T P P+ TP+P +++ T P+ P P++ T PP T
Sbjct: 798 SPPTTTTTTPPPT--TTPSP-PITTTTTPLPTTTPSPPISTTTTPPPTT 843
Score = 29.9 bits (64), Expect = 8.8
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -2
Query: 680 TPPSQXRTPPAPSTRDTPAPLKLSSNITLKPSARPPKPLARFTK-PPTGTA 531
TP S T PS+ TP+P ++ T P+ P P T PPT T+
Sbjct: 1079 TPSSPITTTTTPSSTTTPSP-PPTTMTTPSPTTTPSPPTTTMTTLPPTTTS 1128
>M74027-1|AAA59875.1| 573|Homo sapiens mucin protein.
Length = 573
Score = 34.3 bits (75), Expect = 0.41
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = -2
Query: 680 TPPSQXRTPPAPSTRDTPAPLKLSSNITLKPSARPPKPLARFTKPPTGT 534
+PP+ T P P+T TP+P +++ T P+ P P++ T PP T
Sbjct: 81 SPPTTTTTTPPPTT--TPSP-PITTTTTPPPTTTPSPPISTTTTPPPTT 126
Score = 34.3 bits (75), Expect = 0.41
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Frame = -2
Query: 677 PPSQXRTP-----PAPSTRDTPAPLKLSSNITLKPSARPPKPLARFTKPPTGT 534
PP+ TP P+P T TP+P +++ T P+ P P+ PPT T
Sbjct: 302 PPTTTTTPPPTTTPSPPTTTTPSP-PITTTTTPPPTTTPSSPITTTPSPPTTT 353
Score = 33.1 bits (72), Expect = 0.94
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Frame = -2
Query: 680 TPPSQXRTPPAPSTRDTP---APL-KLSSNITLKPSARP-PKPLARFTKPPTGT 534
+PP+ T P P+T +P P+ +S TL P+ P P P T PPT T
Sbjct: 182 SPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTT 235
Score = 32.3 bits (70), Expect = 1.6
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = -2
Query: 680 TPPSQXRTPPAPSTRDTPAPLKLSSNITLKPSARPPKPLARFTKPPTGT 534
TPP T P+P T TP+P +++ T P+ P P T PP T
Sbjct: 229 TPPPT--TTPSPPTTTTPSPPTITTT-TPPPTTTPSPPTTTTTTPPPTT 274
Score = 31.9 bits (69), Expect = 2.2
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Frame = -2
Query: 680 TPPSQXRTPPAPSTRDTP---APL-KLSSNITLKPSARPPKPLARFTKPPTGT 534
+PP+ T P P+T +P P+ +S TL P+ P P T PP T
Sbjct: 143 SPPTTTTTTPPPTTTPSPPTTTPITPPASTTTLPPTTTPSPPTTTTTTPPPTT 195
Score = 29.9 bits (64), Expect = 8.8
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -2
Query: 680 TPPSQXRTPPAPSTRDTPAPLKLSSNITLKPSARPPKPLARFTK-PPTGTA 531
TP S T PS+ TP+P ++ T P+ P P T PPT T+
Sbjct: 362 TPSSPITTTTTPSSTTTPSP-PPTTMTTPSPTTTPSPPTTTMTTLPPTTTS 411
>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
Length = 5179
Score = 34.3 bits (75), Expect = 0.41
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Frame = -2
Query: 677 PPSQXRTP-----PAPSTRDTPAPLKLSSNITLKPSARPPKPLARFTKPPTGT 534
PP+ TP P+P T TP+P +++ T P+ P P+ PPT T
Sbjct: 1644 PPTTTTTPPPTTTPSPPTTTTPSP-PITTTTTPPPTTTPSSPITTTPSPPTTT 1695
Score = 33.1 bits (72), Expect = 0.94
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Frame = -2
Query: 680 TPPSQXRTPPAPSTRDTP---APL-KLSSNITLKPSARP-PKPLARFTKPPTGT 534
+PP+ T P P+T +P P+ +S TL P+ P P P T PPT T
Sbjct: 1524 SPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTT 1577
Score = 32.3 bits (70), Expect = 1.6
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = -2
Query: 680 TPPSQXRTPPAPSTRDTPAPLKLSSNITLKPSARPPKPLARFTKPPTGT 534
TPP T P+P T TP+P +++ T P+ P P T PP T
Sbjct: 1571 TPPPT--TTPSPPTTTTPSPPTITTT-TPPPTTTPSPPTTTTTTPPPTT 1616
Score = 31.9 bits (69), Expect = 2.2
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Frame = -2
Query: 680 TPPSQXRTPPAPSTRDTP---APL-KLSSNITLKPSARPPKPLARFTKPPTGT 534
+PP+ T P P+T +P P+ +S TL P+ P P T PP T
Sbjct: 1485 SPPTTTTTTPPPTTTPSPPMTTPITPPASTTTLPPTTTPSPPTTTTTTPPPTT 1537
Score = 31.5 bits (68), Expect = 2.9
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = -2
Query: 680 TPPSQXRTPPAPSTRDTPAPLKLSSNITLKPSARPPKPLARFTKPPTGT 534
+PP+ T P P+ TP+P +++ T P+ P P++ T PP T
Sbjct: 1423 SPPTTTTTTPPPT--TTPSP-PITTTTTPLPTTTPSPPISTTTTPPPTT 1468
Score = 29.9 bits (64), Expect = 8.8
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -2
Query: 680 TPPSQXRTPPAPSTRDTPAPLKLSSNITLKPSARPPKPLARFTK-PPTGTA 531
TP S T PS+ TP+P ++ T P+ P P T PPT T+
Sbjct: 1704 TPSSPITTTTTPSSTTTPSP-PPTTMTTPSPTTTPSPPTTTMTTLPPTTTS 1753
>BC025688-1|AAH25688.1| 377|Homo sapiens mucin 7, secreted protein.
Length = 377
Score = 33.9 bits (74), Expect = 0.54
Identities = 20/49 (40%), Positives = 25/49 (51%)
Frame = -2
Query: 677 PPSQXRTPPAPSTRDTPAPLKLSSNITLKPSARPPKPLARFTKPPTGTA 531
PP PP PS TPAPL SS+ + +A PP P A P + +A
Sbjct: 231 PPETTAAPPTPSAT-TPAPL--SSSAPPETTAVPPTPSATTLDPSSASA 276
Score = 31.9 bits (69), Expect = 2.2
Identities = 19/49 (38%), Positives = 24/49 (48%)
Frame = -2
Query: 677 PPSQXRTPPAPSTRDTPAPLKLSSNITLKPSARPPKPLARFTKPPTGTA 531
P PP PS TPAP SS+ + +A PP P A PP+ +A
Sbjct: 162 PQDTTAAPPTPSAT-TPAPP--SSSAPPETTAAPPTPSATTQAPPSSSA 207
Score = 31.5 bits (68), Expect = 2.9
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = -2
Query: 677 PPSQXRTPPAPSTRDTPAPLKLSSNITLKPSARPPKPLARFTKPPTGTA 531
PP PP PS P SS+ + +A PP P A PP+ +A
Sbjct: 185 PPETTAAPPTPSATTQAPP---SSSAPPETTAAPPTPPATTPAPPSSSA 230
>AY553630-1|AAT36325.1| 1450|Homo sapiens ARAP1b protein protein.
Length = 1450
Score = 32.7 bits (71), Expect = 1.2
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -2
Query: 668 QXRTPPAPSTRDTPAPLKLSSNITLKP--SARPPKPLARFTK 549
+ T PAP+ R TP P+ + +I P A PP+PL T+
Sbjct: 66 RAHTSPAPAPRPTPRPVPMKRHIFRSPPVPATPPEPLPTTTE 107
>AK128837-1|BAC87637.1| 286|Homo sapiens protein ( Homo sapiens
cDNA FLJ46366 fis, clone TESTI4051388. ).
Length = 286
Score = 32.7 bits (71), Expect = 1.2
Identities = 20/51 (39%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Frame = -2
Query: 680 TPP--SQXRTPPAPSTRDTPAPLKLSSNITLKPSARPPKPLARFTKPPTGT 534
TPP S RTPP S R TP L+ T P R P PPT +
Sbjct: 48 TPPRASPRRTPPRASPRRTPPRASLTRPPTRAPPTRMPPTAPPTRTPPTAS 98
>AJ621557-1|CAF21317.1| 1450|Homo sapiens ARAP1 protein.
Length = 1450
Score = 32.7 bits (71), Expect = 1.2
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -2
Query: 668 QXRTPPAPSTRDTPAPLKLSSNITLKP--SARPPKPLARFTK 549
+ T PAP+ R TP P+ + +I P A PP+PL T+
Sbjct: 66 RAHTSPAPAPRPTPRPVPMKRHIFRSPPVPATPPEPLPTTTE 107
>AB209473-1|BAD92710.1| 1474|Homo sapiens centaurin delta 2 isoform
a variant protein.
Length = 1474
Score = 32.7 bits (71), Expect = 1.2
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -2
Query: 668 QXRTPPAPSTRDTPAPLKLSSNITLKP--SARPPKPLARFTK 549
+ T PAP+ R TP P+ + +I P A PP+PL T+
Sbjct: 101 RAHTSPAPAPRPTPRPVPMKRHIFRSPPVPATPPEPLPTTTE 142
>BC117688-1|AAI17689.1| 1966|Homo sapiens dedicator of cytokinesis 4
protein.
Length = 1966
Score = 31.9 bits (69), Expect = 2.2
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 6/42 (14%)
Frame = -2
Query: 668 QXRTPPAPST------RDTPAPLKLSSNITLKPSARPPKPLA 561
+ +TPP S R P P LS +T +P A PPKPLA
Sbjct: 1896 ESKTPPPYSVYERTLRRPVPLPHSLSIPVTSEPPALPPKPLA 1937
>AY233380-1|AAO73565.1| 1966|Homo sapiens DOCK4 protein.
Length = 1966
Score = 31.9 bits (69), Expect = 2.2
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 6/42 (14%)
Frame = -2
Query: 668 QXRTPPAPST------RDTPAPLKLSSNITLKPSARPPKPLA 561
+ +TPP S R P P LS +T +P A PPKPLA
Sbjct: 1896 ESKTPPPYSVYERTLRRPVPLPHSLSIPVTSEPPALPPKPLA 1937
>AK098050-1|BAC05221.1| 279|Homo sapiens protein ( Homo sapiens
cDNA FLJ40731 fis, clone TKIDN2000521. ).
Length = 279
Score = 31.9 bits (69), Expect = 2.2
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 6/42 (14%)
Frame = -2
Query: 668 QXRTPPAPST------RDTPAPLKLSSNITLKPSARPPKPLA 561
+ +TPP S R P P LS +T +P A PPKPLA
Sbjct: 209 ESKTPPPYSVYERTLRRPVPLPHSLSIPVTSEPPALPPKPLA 250
>AC005047-1|AAS07431.1| 168|Homo sapiens unknown protein.
Length = 168
Score = 31.9 bits (69), Expect = 2.2
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 6/42 (14%)
Frame = -2
Query: 668 QXRTPPAPST------RDTPAPLKLSSNITLKPSARPPKPLA 561
+ +TPP S R P P LS +T +P A PPKPLA
Sbjct: 98 ESKTPPPYSVYERTLRRPVPLPHSLSIPVTSEPPALPPKPLA 139
>AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein.
Length = 1134
Score = 31.9 bits (69), Expect = 2.2
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = -2
Query: 677 PPSQXRTPPAPSTRDTPAPLKLSSNITLKPSARPPKPLARFTKPPTGTA 531
PP Q RT PA T P P +L+ + RPP AR PT A
Sbjct: 1005 PPPQTRTLPAARTMRQPPPPRLALPRRRRSPPRPPSRPARRGPRPTPQA 1053
>AB018259-1|BAA34436.3| 1388|Homo sapiens KIAA0716 protein protein.
Length = 1388
Score = 31.9 bits (69), Expect = 2.2
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 6/42 (14%)
Frame = -2
Query: 668 QXRTPPAPST------RDTPAPLKLSSNITLKPSARPPKPLA 561
+ +TPP S R P P LS +T +P A PPKPLA
Sbjct: 1318 ESKTPPPYSVYERTLRRPVPLPHSLSIPVTSEPPALPPKPLA 1359
>U12535-1|AAA62280.1| 822|Homo sapiens epidermal growth factor
receptor kinase substrate protein.
Length = 822
Score = 31.5 bits (68), Expect = 2.9
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -2
Query: 674 PSQXRTPPAPSTRDTPAPLKLSSNITLKPSARPPKPLAR 558
P TPPAPS TPAP+ + L PS P P+++
Sbjct: 615 PRPADTPPAPSPPPTPAPVP----VPLPPSTPAPVPVSK 649
>BC117689-1|AAI17690.1| 2011|Homo sapiens DOCK4 protein protein.
Length = 2011
Score = 31.5 bits (68), Expect = 2.9
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 6/42 (14%)
Frame = -2
Query: 668 QXRTPPAPST------RDTPAPLKLSSNITLKPSARPPKPLA 561
+ +TPP S R P P LS +T +P A PPKPLA
Sbjct: 1941 ESKTPPPYSVYERTLRRPIPLPHSLSIPVTSEPPALPPKPLA 1982
>AB029009-1|BAA83038.1| 902|Homo sapiens KIAA1086 protein protein.
Length = 902
Score = 31.5 bits (68), Expect = 2.9
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -2
Query: 677 PPSQXRTPPAPSTRDTPAPLKLSSNITLKPSARPPKPLARFTKPPTG 537
PP+Q PP P + P P S + + ++PP P ++ +P G
Sbjct: 182 PPAQPPPPPGPPQQLPPPPAPAGSGSSPRADSKPPLP-SKLPRPKAG 227
>AF312918-1|AAG34121.1| 919|Homo sapiens MondoA protein.
Length = 919
Score = 27.9 bits (59), Expect(2) = 4.8
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = -2
Query: 641 TRDTPAPLKLSSNITLKPSARPPKPLARFTKP 546
T PAP + L P RPP+P F P
Sbjct: 510 TTHHPAPSAAPCGLALSPVTRPPQPRLTFVHP 541
Score = 21.4 bits (43), Expect(2) = 4.8
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = -2
Query: 677 PPSQXRTPPAPSTRDTP 627
PP+ PPAP T P
Sbjct: 455 PPATALNPPAPPTFHQP 471
>AB020674-1|BAA74890.2| 568|Homo sapiens KIAA0867 protein protein.
Length = 568
Score = 27.9 bits (59), Expect(2) = 4.9
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = -2
Query: 641 TRDTPAPLKLSSNITLKPSARPPKPLARFTKP 546
T PAP + L P RPP+P F P
Sbjct: 159 TTHHPAPSAAPCGLALSPVTRPPQPRLTFVHP 190
Score = 21.4 bits (43), Expect(2) = 4.9
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = -2
Query: 677 PPSQXRTPPAPSTRDTP 627
PP+ PPAP T P
Sbjct: 104 PPATALNPPAPPTFHQP 120
>AF245480-1|AAL55689.1| 526|Homo sapiens Mlx interactor alpha
protein.
Length = 526
Score = 27.9 bits (59), Expect(2) = 5.0
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = -2
Query: 641 TRDTPAPLKLSSNITLKPSARPPKPLARFTKP 546
T PAP + L P RPP+P F P
Sbjct: 117 TTHHPAPSAAPCGLALSPVTRPPQPRLTFVHP 148
Score = 21.4 bits (43), Expect(2) = 5.0
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = -2
Query: 677 PPSQXRTPPAPSTRDTP 627
PP+ PPAP T P
Sbjct: 62 PPATALNPPAPPTFHQP 78
>BC028309-1|AAH28309.1| 453|Homo sapiens MLXIP protein protein.
Length = 453
Score = 27.9 bits (59), Expect(2) = 5.0
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = -2
Query: 641 TRDTPAPLKLSSNITLKPSARPPKPLARFTKP 546
T PAP + L P RPP+P F P
Sbjct: 335 TTHHPAPSAAPCGLALSPVTRPPQPRLTFVHP 366
Score = 21.4 bits (43), Expect(2) = 5.0
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = -2
Query: 677 PPSQXRTPPAPSTRDTP 627
PP+ PPAP T P
Sbjct: 280 PPATALNPPAPPTFHQP 296
>AF245481-1|AAL55690.1| 379|Homo sapiens Mlx interactor beta
protein.
Length = 379
Score = 27.9 bits (59), Expect(2) = 5.1
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = -2
Query: 641 TRDTPAPLKLSSNITLKPSARPPKPLARFTKP 546
T PAP + L P RPP+P F P
Sbjct: 117 TTHHPAPSAAPCGLALSPVTRPPQPRLTFVHP 148
Score = 21.4 bits (43), Expect(2) = 5.1
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = -2
Query: 677 PPSQXRTPPAPSTRDTP 627
PP+ PPAP T P
Sbjct: 62 PPATALNPPAPPTFHQP 78
>BC039704-1|AAH39704.1| 217|Homo sapiens MLXIP protein protein.
Length = 217
Score = 27.9 bits (59), Expect(2) = 5.4
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = -2
Query: 641 TRDTPAPLKLSSNITLKPSARPPKPLARFTKP 546
T PAP + L P RPP+P F P
Sbjct: 99 TTHHPAPSAAPCGLALSPVTRPPQPRLTFVHP 130
Score = 21.4 bits (43), Expect(2) = 5.4
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = -2
Query: 677 PPSQXRTPPAPSTRDTP 627
PP+ PPAP T P
Sbjct: 44 PPATALNPPAPPTFHQP 60
>BC016152-1|AAH16152.1| 318|Homo sapiens PHACTR4 protein protein.
Length = 318
Score = 30.3 bits (65), Expect = 6.6
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -2
Query: 680 TPPSQXRT-PPAPSTRDTPAPLKLSSNITLK-PSARPPKPLARFTKPPTG 537
TP RT P AP++ +T A L+ + K P PPKP R + P G
Sbjct: 268 TPSPAPRTLPAAPASTNTTATPSLTHMVPAKQPPIPPPKPAHRNSNPVIG 317
>AY324389-1|AAQ86961.1| 1332|Homo sapiens neural interleukin 16
precursor protein protein.
Length = 1332
Score = 30.3 bits (65), Expect = 6.6
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = -2
Query: 659 TPPAPSTRDTPAPLKLSSNITL---KPSARPPKPLAR 558
+PP P +RD+ PL+L + + KP + PKP R
Sbjct: 566 SPPLPESRDSHPPLRLKKSFEILVRKPMSSKPKPPPR 602
>AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain 4
protein protein.
Length = 3567
Score = 30.3 bits (65), Expect = 6.6
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = -2
Query: 677 PPSQXRTPPAPSTRDTPAPLKLSSNITLKPSARPPKPLARFTKPP 543
PP PPAP + P+K+ + ++ A PP P PP
Sbjct: 1961 PPPPPPLPPAPPQPSSMGPVKIPNTVSTPLQAPPPTPPPPPPPPP 2005
>AK131530-1|BAD18668.1| 1331|Homo sapiens protein ( Homo sapiens
cDNA FLJ16759 fis, clone BRACE3046450, highly similar
to Interleukin-16 precursor. ).
Length = 1331
Score = 30.3 bits (65), Expect = 6.6
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = -2
Query: 659 TPPAPSTRDTPAPLKLSSNITL---KPSARPPKPLAR 558
+PP P +RD+ PL+L + + KP + PKP R
Sbjct: 566 SPPLPESRDSHPPLRLKKSFEILVRKPMSSKPKPPPR 602
>AK126222-1|BAC86494.1| 824|Homo sapiens protein ( Homo sapiens
cDNA FLJ44234 fis, clone THYMU3007137, highly similar
to Interleukin-16 precursor. ).
Length = 824
Score = 30.3 bits (65), Expect = 6.6
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = -2
Query: 659 TPPAPSTRDTPAPLKLSSNITL---KPSARPPKPLAR 558
+PP P +RD+ PL+L + + KP + PKP R
Sbjct: 60 SPPLPESRDSHPPLRLKKSFEILVRKPMSSKPKPPPR 96
>AK124565-1|BAC85888.1| 1163|Homo sapiens protein ( Homo sapiens
cDNA FLJ42574 fis, clone BRACE3008137, highly similar
to Interleukin-16 precursor. ).
Length = 1163
Score = 30.3 bits (65), Expect = 6.6
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = -2
Query: 659 TPPAPSTRDTPAPLKLSSNITL---KPSARPPKPLAR 558
+PP P +RD+ PL+L + + KP + PKP R
Sbjct: 398 SPPLPESRDSHPPLRLKKSFEILVRKPMSSKPKPPPR 434
>U50839-1|AAC35207.1| 1123|Homo sapiens g16 protein protein.
Length = 1123
Score = 29.9 bits (64), Expect = 8.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 659 TPPAPSTRDTPAPLKLSSNITLKPSARPPKPLAR 558
T P P PAPL+ N L+P+ + P+P R
Sbjct: 574 TYPQPQKTSIPAPLEKQPNQPLRPADKEPEPRKR 607
>BC046643-1|AAH46643.1| 601|Homo sapiens RBM6 protein protein.
Length = 601
Score = 29.9 bits (64), Expect = 8.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 659 TPPAPSTRDTPAPLKLSSNITLKPSARPPKPLAR 558
T P P PAPL+ N L+P+ + P+P R
Sbjct: 52 TYPQPQKTSIPAPLEKQPNQPLRPADKEPEPRKR 85
>BC030010-1|AAH30010.1| 822|Homo sapiens epidermal growth factor
receptor pathway substrate 8 protein.
Length = 822
Score = 29.9 bits (64), Expect = 8.8
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -2
Query: 674 PSQXRTPPAPSTRDTPAPLKLSSNITLKPSARPPKPLAR 558
P TPPAPS TP P+ + L PS P P+++
Sbjct: 615 PRPADTPPAPSPPPTPVPVP----VPLPPSTPAPVPVSK 649
>AK057444-1|BAB71489.1| 602|Homo sapiens protein ( Homo sapiens
cDNA FLJ32882 fis, clone TESTI2004207, moderately
similar to Columba livia mRNA for 5'-nucleotidase. ).
Length = 602
Score = 29.9 bits (64), Expect = 8.8
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -2
Query: 671 SQXRTPP-APSTRDTPAPLKLSSNITLKPSARPPKPLARFTKPPT 540
+ RTP +PS D+ P LS +L+P A P P + ++PPT
Sbjct: 152 TSSRTPSTSPSLHDSSPP-PLSGQPSLQPPASPQLPRSLDSRPPT 195
>AK025429-1|BAB15128.1| 274|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21776 fis, clone HEP00171. ).
Length = 274
Score = 29.9 bits (64), Expect = 8.8
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Frame = -2
Query: 677 PPSQXRTPPAPSTRDT--PAPLKLSSNITLKPSARPPKP 567
PP TPP PS T P P N PS PP+P
Sbjct: 234 PPPSAPTPPIPSPPSTLPPPPQAPPPNRAPPPSRPPPRP 272
>AF356185-1|AAK39108.1| 565|Homo sapiens autoimmune
infertility-related protein protein.
Length = 565
Score = 29.9 bits (64), Expect = 8.8
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -2
Query: 671 SQXRTPP-APSTRDTPAPLKLSSNITLKPSARPPKPLARFTKPPT 540
+ RTP +PS D+ P LS +L+P A P P + ++PPT
Sbjct: 107 TSSRTPSTSPSLHDSSPP-PLSGQPSLQPPASPQLPRSLDSRPPT 150
>AF279145-1|AAK52094.1| 564|Homo sapiens tumor endothelial marker 8
precursor protein.
Length = 564
Score = 29.9 bits (64), Expect = 8.8
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Frame = -2
Query: 677 PPSQXRTPPAPSTRDT--PAPLKLSSNITLKPSARPPKP 567
PP TPP PS T P P N PS PP+P
Sbjct: 524 PPPSAPTPPIPSPPSTLPPPPQAPPPNRAPPPSRPPPRP 562
>AF091264-1|AAD04160.1| 1123|Homo sapiens RNA binding motif protein
6 protein.
Length = 1123
Score = 29.9 bits (64), Expect = 8.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 659 TPPAPSTRDTPAPLKLSSNITLKPSARPPKPLAR 558
T P P PAPL+ N L+P+ + P+P R
Sbjct: 574 TYPQPQKTSIPAPLEKQPNQPLRPADKEPEPRKR 607
>AF069517-1|AAC21578.1| 1123|Homo sapiens RNA binding protein DEF-3
protein.
Length = 1123
Score = 29.9 bits (64), Expect = 8.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 659 TPPAPSTRDTPAPLKLSSNITLKPSARPPKPLAR 558
T P P PAPL+ N L+P+ + P+P R
Sbjct: 574 TYPQPQKTSIPAPLEKQPNQPLRPADKEPEPRKR 607
>AF042857-1|AAC05826.1| 1123|Homo sapiens lung cancer antigen
NY-LU-12 variant A protein.
Length = 1123
Score = 29.9 bits (64), Expect = 8.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 659 TPPAPSTRDTPAPLKLSSNITLKPSARPPKPLAR 558
T P P PAPL+ N L+P+ + P+P R
Sbjct: 574 TYPQPQKTSIPAPLEKQPNQPLRPADKEPEPRKR 607
>AC112230-1|AAX88860.1| 329|Homo sapiens unknown protein.
Length = 329
Score = 29.9 bits (64), Expect = 8.8
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Frame = -2
Query: 677 PPSQXRTPPAPSTRDT--PAPLKLSSNITLKPSARPPKP 567
PP TPP PS T P P N PS PP+P
Sbjct: 289 PPPSAPTPPIPSPPSTLPPPPQAPPPNRAPPPSRPPPRP 327
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,213,383
Number of Sequences: 237096
Number of extensions: 1462503
Number of successful extensions: 7723
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 6218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7588
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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