Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_M06
         (673 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.            22   6.1  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    21   8.1  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    21   8.1  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    21   8.1  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    21   8.1  
AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor prot...    21   8.1  

>AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.
          Length = 50

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +1

Query: 529 HNSATYWSNVYFC 567
           HN + YWS  + C
Sbjct: 34  HNGSIYWSMYHLC 46


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/17 (41%), Positives = 14/17 (82%)
 Frame = -2

Query: 285 TKGQCVNFTVD*FKVEI 235
           T+G+C+++TVD  K ++
Sbjct: 137 TEGRCLHYTVDKSKPKV 153


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/17 (41%), Positives = 14/17 (82%)
 Frame = -2

Query: 285 TKGQCVNFTVD*FKVEI 235
           T+G+C+++TVD  K ++
Sbjct: 142 TEGRCLHYTVDKSKPKV 158


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/17 (41%), Positives = 14/17 (82%)
 Frame = -2

Query: 285 TKGQCVNFTVD*FKVEI 235
           T+G+C+++TVD  K ++
Sbjct: 142 TEGRCLHYTVDKSKPKV 158


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +1

Query: 511 ESWKNFHNSATYWSNVYFCLHNSNCSI 591
           E  K F   +   + VY C + +NC I
Sbjct: 205 EGCKGFFRRSITKNAVYQCKYGNNCEI 231


>AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor
           protein.
          Length = 72

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +1

Query: 511 ESWKNFHNSATYWSNVYFCLHNSNCSI 591
           E  K F   +   + VY C + +NC I
Sbjct: 2   EGCKGFFRRSITKNAVYQCKYGNNCEI 28


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,521
Number of Sequences: 438
Number of extensions: 3665
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20343105
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)