Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_M05
(582 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132862-21|CAB70232.1| 476|Caenorhabditis elegans Hypothetical... 59 2e-09
Z81453-6|CAH04639.1| 283|Caenorhabditis elegans Hypothetical pr... 31 0.79
Z81134-9|CAB03452.1| 559|Caenorhabditis elegans Hypothetical pr... 29 2.4
U12762-1|AAA62207.1| 558|Caenorhabditis elegans prolyl 4-hydrox... 29 2.4
AL031635-12|CAA21045.1| 559|Caenorhabditis elegans Hypothetical... 29 2.4
AJ277376-1|CAB88202.1| 268|Caenorhabditis elegans prolyl 4-hydr... 29 2.4
AJ270999-1|CAB71298.1| 559|Caenorhabditis elegans prolyl 4-hydr... 29 2.4
Z81454-4|CAD89725.1| 483|Caenorhabditis elegans Hypothetical pr... 29 3.2
U41995-5|AAA83462.1| 354|Caenorhabditis elegans G protein, alph... 29 3.2
M38250-1|AAA28061.1| 354|Caenorhabditis elegans G protein alpha... 29 3.2
AY008126-1|AAG32079.1| 354|Caenorhabditis elegans heterotrimeri... 29 3.2
AF040646-6|AAK31540.1| 510|Caenorhabditis elegans Hypothetical ... 29 3.2
AF040646-5|AAK31539.1| 492|Caenorhabditis elegans Hypothetical ... 29 3.2
Z81128-8|CAB03402.1| 811|Caenorhabditis elegans Hypothetical pr... 27 7.4
AC006791-4|AAM97974.1| 603|Caenorhabditis elegans Metabotropic ... 27 7.4
Z69302-3|CAA93266.1| 442|Caenorhabditis elegans Hypothetical pr... 27 9.7
U80453-8|AAK31442.1| 317|Caenorhabditis elegans Egg laying defe... 27 9.7
U53341-3|AAM69115.1| 608|Caenorhabditis elegans Hypothetical pr... 27 9.7
U53341-2|AAC69108.2| 645|Caenorhabditis elegans Hypothetical pr... 27 9.7
AC024801-3|AAK68511.3| 852|Caenorhabditis elegans Hypothetical ... 27 9.7
>AL132862-21|CAB70232.1| 476|Caenorhabditis elegans Hypothetical
protein Y73F8A.26 protein.
Length = 476
Score = 59.3 bits (137), Expect = 2e-09
Identities = 38/163 (23%), Positives = 72/163 (44%), Gaps = 4/163 (2%)
Frame = -2
Query: 578 GKDAYNKNDWEKTITNFEEAIKDYFSVENNCRAECELQPDQQI---SSEFIITIANNVAS 408
G +AY++ DW + + FE A++ + CR C+ + D + + E I +A+ AS
Sbjct: 190 GVEAYDQQDWGRCVNEFESALEKSIIQDEKCRLLCQDKIDWSVVDGNPEIDILLASMRAS 249
Query: 407 LLHCQQQCQDILKKFSYQSGIEFLTDVLDYLQISYYYTKDYEGAAEAVSTYMVMIPDAED 228
++ C+ C L + + +YL ++ + AA+ V+ Y+ + D+
Sbjct: 250 VIRCEHNCLYKLARINGHYVGHLFAAHFEYLHFCHFKMQRGAEAAQTVANYL-LFDDSPL 308
Query: 227 MIENKKFYSSLVDK-EAFVNRSDIVYYFKRDTYEKMILNLXHK 102
M N+ FY K E F +++ ++R E L K
Sbjct: 309 MRRNRYFYGKQYKKNELFTPSQEVLDIYRRRDLEARFLEFMEK 351
Score = 44.4 bits (100), Expect = 6e-05
Identities = 35/165 (21%), Positives = 73/165 (44%), Gaps = 10/165 (6%)
Frame = -2
Query: 578 GKDAYNKNDWEKTITNFEEAIKDYFSVEN---NCRAECELQPDQQISSEFIITIANNVAS 408
GK+ Y + +W + + AI D+ ++ +CR +C Q SS I + +
Sbjct: 31 GKNEYTERNWPDCVAFMKRAIDDFRQYQDDVVSCRRKCNRQIKPATSSSPKIAKFHETSE 90
Query: 407 LLHCQQQCQ-------DILKKFSYQSGIEFLTDVLDYLQISYYYTKDYEGAAEAVSTYMV 249
C +C+ +KK S +E Y+ I YY+ + A ++ T++V
Sbjct: 91 TALCLLRCRKDMFGDHQSIKKMSVYHDLE-ERKPYQYMHICYYHQGELAMAVQSAYTFLV 149
Query: 248 MIPDAEDMIENKKFYSSLVDKEAFVNRSDIVYYFKRDTYEKMILN 114
PD +D+ ++ +Y ++++ + D++ +R +E +N
Sbjct: 150 ANPDDKDIKQSLNWY---MNRDGY--SDDMLIDMERKDHEAKFIN 189
>Z81453-6|CAH04639.1| 283|Caenorhabditis elegans Hypothetical
protein B0250.10 protein.
Length = 283
Score = 30.7 bits (66), Expect = 0.79
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +3
Query: 69 IFXLKTXFITVLVXQIQN-HFFISIPFKVVNNIRSVNKSFFIYKR--AIEFFVFYHIFSI 239
I+ L T T + I+N HF + IP + N+RSV +R AI F +F+HI+
Sbjct: 64 IYFLLTQISTDFI--IKNVHFSLVIPAASIGNMRSVLTLLIALERVIAIYFPIFFHIYRQ 121
Query: 240 RYHNHI 257
+ N +
Sbjct: 122 KLPNFV 127
>Z81134-9|CAB03452.1| 559|Caenorhabditis elegans Hypothetical
protein Y47D3B.10 protein.
Length = 559
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = -2
Query: 332 DVLDYLQISYYYTKDYEGAAEAVSTYMVMIPDAEDMIENKKFYSSLVDKEAFVNRSDI 159
D+L+YL + Y + + A + M P N K+Y L+++E V RSD+
Sbjct: 205 DILEYLAFALYKQNNLKHALKLTEELYKMNPTHPRAKGNVKWYEDLLEQEG-VRRSDM 261
>U12762-1|AAA62207.1| 558|Caenorhabditis elegans prolyl
4-hydroxylase alpha subunit protein.
Length = 558
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = -2
Query: 332 DVLDYLQISYYYTKDYEGAAEAVSTYMVMIPDAEDMIENKKFYSSLVDKEAFVNRSDI 159
D+L+YL + Y + + A + M P N K+Y L+++E V RSD+
Sbjct: 205 DILEYLAFALYKQNNLKHALKLTEELYKMNPTHPRAKGNVKWYEDLLEQEG-VRRSDM 261
>AL031635-12|CAA21045.1| 559|Caenorhabditis elegans Hypothetical
protein Y47D3B.10 protein.
Length = 559
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = -2
Query: 332 DVLDYLQISYYYTKDYEGAAEAVSTYMVMIPDAEDMIENKKFYSSLVDKEAFVNRSDI 159
D+L+YL + Y + + A + M P N K+Y L+++E V RSD+
Sbjct: 205 DILEYLAFALYKQNNLKHALKLTEELYKMNPTHPRAKGNVKWYEDLLEQEG-VRRSDM 261
>AJ277376-1|CAB88202.1| 268|Caenorhabditis elegans prolyl
4-hydroxylase alpha subunit1 protein.
Length = 268
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = -2
Query: 332 DVLDYLQISYYYTKDYEGAAEAVSTYMVMIPDAEDMIENKKFYSSLVDKEAFVNRSDI 159
D+L+YL + Y + + A + M P N K+Y L+++E V RSD+
Sbjct: 205 DILEYLAFALYKQNNLKHALKLTEELYKMNPTHPRAKGNVKWYEDLLEQEG-VRRSDM 261
>AJ270999-1|CAB71298.1| 559|Caenorhabditis elegans prolyl
4-hydroxylase alpha subunit1 protein.
Length = 559
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = -2
Query: 332 DVLDYLQISYYYTKDYEGAAEAVSTYMVMIPDAEDMIENKKFYSSLVDKEAFVNRSDI 159
D+L+YL + Y + + A + M P N K+Y L+++E V RSD+
Sbjct: 205 DILEYLAFALYKQNNLKHALKLTEELYKMNPTHPRAKGNVKWYEDLLEQEG-VRRSDM 261
>Z81454-4|CAD89725.1| 483|Caenorhabditis elegans Hypothetical
protein B0391.6 protein.
Length = 483
Score = 28.7 bits (61), Expect = 3.2
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = -2
Query: 248 MIPDAEDMIENKKFYSSLVDKEAFVNRSDIVYYFKRDTYEKMILNLXHKDSDEGSFK 78
++P D+ + K + L DKE + ++ +FK T E MIL H++SD F+
Sbjct: 309 LLPHLLDVKKLKLDSNFLRDKENNYELASVLSHFKPGTLEHMILGF-HRESDIPGFE 364
>U41995-5|AAA83462.1| 354|Caenorhabditis elegans G protein, alpha
subunit protein 3 protein.
Length = 354
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = -2
Query: 269 AVSTY-MVMIPD--AEDMIENKKFYSSLVDKEAFVNRSDIVYYFKRDTYEKMI 120
A+S Y V+ D MIE+ + + S+ + F+N S I++ K+D + + I
Sbjct: 227 AISEYDQVLFEDETTNRMIESMRLFESICNSRWFINTSMILFLNKKDLFAEKI 279
>M38250-1|AAA28061.1| 354|Caenorhabditis elegans G protein alpha
subunit protein.
Length = 354
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = -2
Query: 269 AVSTY-MVMIPD--AEDMIENKKFYSSLVDKEAFVNRSDIVYYFKRDTYEKMI 120
A+S Y V+ D MIE+ + + S+ + F+N S I++ K+D + + I
Sbjct: 227 AISEYDQVLFEDETTNRMIESMRLFESICNSRWFINTSMILFLNKKDLFAEKI 279
>AY008126-1|AAG32079.1| 354|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 354
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = -2
Query: 269 AVSTY-MVMIPD--AEDMIENKKFYSSLVDKEAFVNRSDIVYYFKRDTYEKMI 120
A+S Y V+ D MIE+ + + S+ + F+N S I++ K+D + + I
Sbjct: 227 AISEYDQVLFEDETTNRMIESMRLFESICNSRWFINTSMILFLNKKDLFAEKI 279
>AF040646-6|AAK31540.1| 510|Caenorhabditis elegans Hypothetical
protein H17B01.1b protein.
Length = 510
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 93 ITVLVXQIQNHFFISIPFKVVNNIRSVNKSFFIYKRAIEFFVFY 224
I V+V N + + F +NN+ SFFI+ + FF+FY
Sbjct: 445 IAVMVNWAAN-LLVGLTFLPINNLMQ-QYSFFIFSGFLAFFIFY 486
>AF040646-5|AAK31539.1| 492|Caenorhabditis elegans Hypothetical
protein H17B01.1a protein.
Length = 492
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 93 ITVLVXQIQNHFFISIPFKVVNNIRSVNKSFFIYKRAIEFFVFY 224
I V+V N + + F +NN+ SFFI+ + FF+FY
Sbjct: 427 IAVMVNWAAN-LLVGLTFLPINNLMQ-QYSFFIFSGFLAFFIFY 468
>Z81128-8|CAB03402.1| 811|Caenorhabditis elegans Hypothetical
protein T23D8.9a protein.
Length = 811
Score = 27.5 bits (58), Expect = 7.4
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 411 CYIICNCYDKL*RYLLVWL 467
C IICNC L +L++W+
Sbjct: 574 CEIICNCLRTLNNFLMMWI 592
>AC006791-4|AAM97974.1| 603|Caenorhabditis elegans Metabotropic
glutamate receptorfamily protein 3, isoform b protein.
Length = 603
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 388 CCWQCKRDATLFAIVMINSEDICWSGCNSHSARQLF 495
CCW C T +I + ICW+ N+ S +LF
Sbjct: 564 CCWACIPCDTSTSIHNETRKVICWTIINASSDFRLF 599
>Z69302-3|CAA93266.1| 442|Caenorhabditis elegans Hypothetical
protein F40F8.8 protein.
Length = 442
Score = 27.1 bits (57), Expect = 9.7
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +1
Query: 385 HCCWQCKRDATLFAIVMINSEDIC 456
+CCW C+R A I++ + +C
Sbjct: 167 NCCWCCQRGALALRIILERTAYVC 190
>U80453-8|AAK31442.1| 317|Caenorhabditis elegans Egg laying
defective protein 26 protein.
Length = 317
Score = 27.1 bits (57), Expect = 9.7
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 99 VLVXQIQNHFFISIPFKVVNNIRSVNKS 182
++ ++N FISIPFKV + +S+ +S
Sbjct: 68 MITANMRNRPFISIPFKVSSGAQSIEES 95
>U53341-3|AAM69115.1| 608|Caenorhabditis elegans Hypothetical
protein F49E10.4b protein.
Length = 608
Score = 27.1 bits (57), Expect = 9.7
Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Frame = -2
Query: 518 IKDYFSVENNCRAECELQP-DQQISSEFIITIANNVASLLHCQQQCQDILKKFSYQSGIE 342
+K SV NN + EL + +SS+ A + CQ + KK G+E
Sbjct: 464 LKALGSVNNNAKESNELTMFEDALSSQLHKEFTTTKAGGHIAEDLCQQVFKKLDEYPGVE 523
Query: 341 FLTDVLDYLQ 312
+ Y+Q
Sbjct: 524 ECLTIHQYIQ 533
>U53341-2|AAC69108.2| 645|Caenorhabditis elegans Hypothetical
protein F49E10.4a protein.
Length = 645
Score = 27.1 bits (57), Expect = 9.7
Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Frame = -2
Query: 518 IKDYFSVENNCRAECELQP-DQQISSEFIITIANNVASLLHCQQQCQDILKKFSYQSGIE 342
+K SV NN + EL + +SS+ A + CQ + KK G+E
Sbjct: 509 LKALGSVNNNAKESNELTMFEDALSSQLHKEFTTTKAGGHIAEDLCQQVFKKLDEYPGVE 568
Query: 341 FLTDVLDYLQ 312
+ Y+Q
Sbjct: 569 ECLTIHQYIQ 578
>AC024801-3|AAK68511.3| 852|Caenorhabditis elegans Hypothetical
protein Y50D7A.4 protein.
Length = 852
Score = 27.1 bits (57), Expect = 9.7
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = -2
Query: 374 LKKFSYQSGIEFLTDVLDYLQISYYYTKDYEGAAEAVSTYMVMIPDAEDMIENKKFY-SS 198
L+K + S I L + D L+ + YY Y+GA A+ Y+ MI +DM E+
Sbjct: 539 LRKMTLCSYIRLLR-MCDKLRDADYY---YQGAKLAIKIYLRMIDRPDDMNEHSALIKEG 594
Query: 197 LVDKE 183
+ D+E
Sbjct: 595 MTDQE 599
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,702,243
Number of Sequences: 27780
Number of extensions: 208469
Number of successful extensions: 682
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 682
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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