Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_M05
         (582 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    26   0.24 
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    23   1.7  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   5.1  

>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 10/12 (83%), Positives = 10/12 (83%)
 Frame = +3

Query: 240 RYHNHISGDRFS 275
           RYH  ISGDRFS
Sbjct: 34  RYHQQISGDRFS 45


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 502 QWKTIAVQNVNCNQTNRY 449
           +W  +++ N N N TN+Y
Sbjct: 128 KWFQMSINNTNNNNTNKY 145


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 11/45 (24%), Positives = 23/45 (51%)
 Frame = +3

Query: 150 VVNNIRSVNKSFFIYKRAIEFFVFYHIFSIRYHNHISGDRFSCTL 284
           ++ ++  VNK    Y + +     Y+I++ RY    SG + + T+
Sbjct: 30  IMFSMTQVNKEECDYYQNLNLGEIYYIYNPRYPLPYSGSKCTWTI 74


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,977
Number of Sequences: 438
Number of extensions: 2461
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16870914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)