Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_M02
         (670 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    25   0.74 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   5.2  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   5.2  

>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 24.6 bits (51), Expect = 0.74
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -2

Query: 516 DYIWELDNLRLMF-FFSICTSMN*KKSCIHLFGRKC 412
           D I  L NL  +F F  +C+S   +K+C++L    C
Sbjct: 13  DVIKPLINLTKIFGFLPVCSSQKGQKTCLNLSINYC 48


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 11/41 (26%), Positives = 19/41 (46%)
 Frame = -2

Query: 573 CKKNVDSIFSLSWALIVLRDYIWELDNLRLMFFFSICTSMN 451
           CKK ++ ++     L +L   IW +  +  +     CTS N
Sbjct: 225 CKK-INKLYGHQLLLTILTYLIWTIYEMYHLAILWSCTSTN 264


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 523 FERLYLGTGQSKINVFF 473
           FER+Y    + K++VFF
Sbjct: 165 FERIYYKLTKKKLSVFF 181


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,957
Number of Sequences: 336
Number of extensions: 2725
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)